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adding test data for neighbor_joining

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1 parent 3a9e808 commit 398e336c6891c77139d79a7f3751ae5bac826c7c jose committed Oct 16, 2012
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10 neighbor_joining/beta_div.txt
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+ PC.636 PC.635 PC.356 PC.481 PC.354 PC.593 PC.355 PC.607 PC.634
+PC.636 0.0 36.7287353444 49.9599839872 48.3528696149 58.7792480387 56.4003546088 53.2634959423 50.3884907494 46.7332857822
+PC.635 36.7287353444 0.0 32.3264597505 29.7825452237 44.4747119159 42.3792402008 36.7967389859 31.5594676761 29.6141857899
+PC.356 49.9599839872 32.3264597505 0.0 30.8220700148 30.8382878902 38.3536178215 36.5102725271 37.0270171631 39.9749921826
+PC.481 48.3528696149 29.7825452237 30.8220700148 0.0 41.3400532172 40.5832477754 33.8378486314 32.8785644455 37.8153408024
+PC.354 58.7792480387 44.4747119159 30.8382878902 41.3400532172 0.0 48.6415460281 45.9347363114 47.6235235992 49.6487663492
+PC.593 56.4003546088 42.3792402008 38.3536178215 40.5832477754 48.6415460281 0.0 48.1456124688 38.2883794382 48.3632091574
+PC.355 53.2634959423 36.7967389859 36.5102725271 33.8378486314 45.9347363114 48.1456124688 0.0 42.8719022205 34.7419055321
+PC.607 50.3884907494 31.5594676761 37.0270171631 32.8785644455 47.6235235992 38.2883794382 42.8719022205 0.0 40.3360880602
+PC.634 46.7332857822 29.6141857899 39.9749921826 37.8153408024 49.6487663492 48.3632091574 34.7419055321 40.3360880602 0.0
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1 neighbor_joining/beta_div_cluster.tre
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+(PC.481:14.4873944593,((PC.354:20.5240133746,PC.356:10.3142745156):5.78550819279,(PC.593:22.1370933114,PC.607:16.1512861268):2.56258429598):0.462876327469,((PC.635:9.94975525545,PC.636:26.7789800889):3.58021349283,(PC.634:17.2101795528,PC.355:17.5317259793):2.286392694):2.15879329629);
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1 neighbor_joining/beta_div_weighted_clusters/nj_weighted_unifrac_otu_table.tre
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+(((PC.481:0.0645590956648,(PC.354:0.101869607516,PC.356:0.04292858622):0.0244252544072):0.0450374094554,PC.355:0.0767744351936):0.104600286097,(PC.607:0.108729077792,PC.593:0.112108975899):0.0170922836667,((PC.636:0.110085500395,PC.634:0.0973053509562):0.0741396836822,PC.635:0.0802236851733):0.0371263657501);
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1 neighbor_joining/beta_div_weighted_clusters/nj_weighted_unifrac_otu_table_1.tre
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+(((PC.481:0.0645590956648,(PC.354:0.101869607516,PC.356:0.04292858622):0.0244252544072):0.0450374094554,PC.355:0.0767744351936):0.104600286097,(PC.607:0.108729077792,PC.593:0.112108975899):0.0170922836667,((PC.636:0.110085500395,PC.634:0.0973053509562):0.0741396836822,PC.635:0.0802236851733):0.0371263657501);
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1 neighbor_joining/beta_div_weighted_clusters/nj_weighted_unifrac_otu_table_2.tre
@@ -0,0 +1 @@
+(((PC.481:0.0645590956648,(PC.354:0.101869607516,PC.356:0.04292858622):0.0244252544072):0.0450374094554,PC.355:0.0767744351936):0.104600286097,(PC.607:0.108729077792,PC.593:0.112108975899):0.0170922836667,((PC.636:0.110085500395,PC.634:0.0973053509562):0.0741396836822,PC.635:0.0802236851733):0.0371263657501);
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1 neighbor_joining/beta_div_weighted_clusters/nj_weighted_unifrac_otu_table_3.tre
@@ -0,0 +1 @@
+(((PC.481:0.0645590956648,(PC.354:0.101869607516,PC.356:0.04292858622):0.0244252544072):0.0450374094554,PC.355:0.0767744351936):0.104600286097,(PC.607:0.108729077792,PC.593:0.112108975899):0.0170922836667,((PC.636:0.110085500395,PC.634:0.0973053509562):0.0741396836822,PC.635:0.0802236851733):0.0371263657501);
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10 neighbor_joining/beta_div_weighted_unifrac/weighted_unifrac_otu_table.txt
@@ -0,0 +1,10 @@
+ PC.636 PC.635 PC.356 PC.481 PC.354 PC.593 PC.355 PC.607 PC.634
+PC.636 0.0 0.275683407854 0.453169793694 0.463169006849 0.530075154635 0.316693638219 0.367507936661 0.367668532106 0.207390851351
+PC.635 0.275683407854 0.0 0.332995003579 0.341452795348 0.411631543624 0.262879798658 0.301005982286 0.221100536913 0.240434181208
+PC.356 0.453169793694 0.332995003579 0.0 0.154091373516 0.144798193736 0.332624051454 0.186403568707 0.322076019239 0.443208
+PC.481 0.463169006849 0.341452795348 0.154091373516 0.0 0.168675520364 0.329334425393 0.192866592582 0.318716145536 0.433075579909
+PC.354 0.530075154635 0.411631543624 0.144798193736 0.168675520364 0.0 0.395430805369 0.237877518605 0.396216241611 0.510311668456
+PC.593 0.316693638219 0.262879798658 0.332624051454 0.329334425393 0.395430805369 0.0 0.322882191481 0.220838053691 0.340061936913
+PC.355 0.367507936661 0.301005982286 0.186403568707 0.192866592582 0.237877518605 0.322882191481 0.0 0.324959266311 0.360463247619
+PC.607 0.367668532106 0.221100536913 0.322076019239 0.318716145536 0.396216241611 0.220838053691 0.324959266311 0.0 0.356951809843
+PC.634 0.207390851351 0.240434181208 0.443208 0.433075579909 0.510311668456 0.340061936913 0.360463247619 0.356951809843 0.0
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10 neighbor_joining/beta_div_weighted_unifrac/weighted_unifrac_otu_table_1.txt
@@ -0,0 +1,10 @@
+ PC.636 PC.635 PC.356 PC.481 PC.354 PC.593 PC.355 PC.607 PC.634
+PC.636 0.0 0.275683407854 0.453169793694 0.463169006849 0.530075154635 0.316693638219 0.367507936661 0.367668532106 0.207390851351
+PC.635 0.275683407854 0.0 0.332995003579 0.341452795348 0.411631543624 0.262879798658 0.301005982286 0.221100536913 0.240434181208
+PC.356 0.453169793694 0.332995003579 0.0 0.154091373516 0.144798193736 0.332624051454 0.186403568707 0.322076019239 0.443208
+PC.481 0.463169006849 0.341452795348 0.154091373516 0.0 0.168675520364 0.329334425393 0.192866592582 0.318716145536 0.433075579909
+PC.354 0.530075154635 0.411631543624 0.144798193736 0.168675520364 0.0 0.395430805369 0.237877518605 0.396216241611 0.510311668456
+PC.593 0.316693638219 0.262879798658 0.332624051454 0.329334425393 0.395430805369 0.0 0.322882191481 0.220838053691 0.340061936913
+PC.355 0.367507936661 0.301005982286 0.186403568707 0.192866592582 0.237877518605 0.322882191481 0.0 0.324959266311 0.360463247619
+PC.607 0.367668532106 0.221100536913 0.322076019239 0.318716145536 0.396216241611 0.220838053691 0.324959266311 0.0 0.356951809843
+PC.634 0.207390851351 0.240434181208 0.443208 0.433075579909 0.510311668456 0.340061936913 0.360463247619 0.356951809843 0.0
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10 neighbor_joining/beta_div_weighted_unifrac/weighted_unifrac_otu_table_2.txt
@@ -0,0 +1,10 @@
+ PC.636 PC.635 PC.356 PC.481 PC.354 PC.593 PC.355 PC.607 PC.634
+PC.636 0.0 0.275683407854 0.453169793694 0.463169006849 0.530075154635 0.316693638219 0.367507936661 0.367668532106 0.207390851351
+PC.635 0.275683407854 0.0 0.332995003579 0.341452795348 0.411631543624 0.262879798658 0.301005982286 0.221100536913 0.240434181208
+PC.356 0.453169793694 0.332995003579 0.0 0.154091373516 0.144798193736 0.332624051454 0.186403568707 0.322076019239 0.443208
+PC.481 0.463169006849 0.341452795348 0.154091373516 0.0 0.168675520364 0.329334425393 0.192866592582 0.318716145536 0.433075579909
+PC.354 0.530075154635 0.411631543624 0.144798193736 0.168675520364 0.0 0.395430805369 0.237877518605 0.396216241611 0.510311668456
+PC.593 0.316693638219 0.262879798658 0.332624051454 0.329334425393 0.395430805369 0.0 0.322882191481 0.220838053691 0.340061936913
+PC.355 0.367507936661 0.301005982286 0.186403568707 0.192866592582 0.237877518605 0.322882191481 0.0 0.324959266311 0.360463247619
+PC.607 0.367668532106 0.221100536913 0.322076019239 0.318716145536 0.396216241611 0.220838053691 0.324959266311 0.0 0.356951809843
+PC.634 0.207390851351 0.240434181208 0.443208 0.433075579909 0.510311668456 0.340061936913 0.360463247619 0.356951809843 0.0
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10 neighbor_joining/beta_div_weighted_unifrac/weighted_unifrac_otu_table_3.txt
@@ -0,0 +1,10 @@
+ PC.636 PC.635 PC.356 PC.481 PC.354 PC.593 PC.355 PC.607 PC.634
+PC.636 0.0 0.275683407854 0.453169793694 0.463169006849 0.530075154635 0.316693638219 0.367507936661 0.367668532106 0.207390851351
+PC.635 0.275683407854 0.0 0.332995003579 0.341452795348 0.411631543624 0.262879798658 0.301005982286 0.221100536913 0.240434181208
+PC.356 0.453169793694 0.332995003579 0.0 0.154091373516 0.144798193736 0.332624051454 0.186403568707 0.322076019239 0.443208
+PC.481 0.463169006849 0.341452795348 0.154091373516 0.0 0.168675520364 0.329334425393 0.192866592582 0.318716145536 0.433075579909
+PC.354 0.530075154635 0.411631543624 0.144798193736 0.168675520364 0.0 0.395430805369 0.237877518605 0.396216241611 0.510311668456
+PC.593 0.316693638219 0.262879798658 0.332624051454 0.329334425393 0.395430805369 0.0 0.322882191481 0.220838053691 0.340061936913
+PC.355 0.367507936661 0.301005982286 0.186403568707 0.192866592582 0.237877518605 0.322882191481 0.0 0.324959266311 0.360463247619
+PC.607 0.367668532106 0.221100536913 0.322076019239 0.318716145536 0.396216241611 0.220838053691 0.324959266311 0.0 0.356951809843
+PC.634 0.207390851351 0.240434181208 0.443208 0.433075579909 0.510311668456 0.340061936913 0.360463247619 0.356951809843 0.0

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