From cce02de416cae2b3d474deb1f1f0bf06280b04e3 Mon Sep 17 00:00:00 2001 From: ChrisgKent Date: Tue, 19 Mar 2024 14:49:45 +0000 Subject: [PATCH 1/3] Auto updating index --- index.json | 122 ++++++++++++++++++++++++++--------------------------- 1 file changed, 61 insertions(+), 61 deletions(-) diff --git a/index.json b/index.json index 9552e3a..bda7574 100644 --- a/index.json +++ b/index.json @@ -1,5 +1,5 @@ { - "github-commit-sha": "b4d20f6fe0f1fd61dfa48b0df24cd0e07252afd4", + "github-commit-sha": "e1e427fa134614b79cdde6d18d7a9cef94841e96", "primerschemes": { "artic-measles": { "400": { @@ -18,13 +18,13 @@ "WHOLE-GENOME", "ARTIC" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-measles/400/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-measles/400/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "b8b903356d4c6bd4dc03af04f3a18222", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-measles/400/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-measles/400/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "2c3dd74742a333dffb50bcfbd158bfbd", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-measles/400/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-measles/400/v1.0.0/reference.fasta", "schemename": "artic-measles", "schemeversion": "v1.0.0", "species": [ @@ -51,13 +51,13 @@ "QUICK-LAB", "ARTIC" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-pan-ebola/1000/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-pan-ebola/1000/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "c58ec3b4d07d24499106fed6501016a9", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-pan-ebola/1000/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-pan-ebola/1000/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "083c89a1798778fbe94a643d83a6fbb1", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-pan-ebola/1000/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-pan-ebola/1000/v1.0.0/reference.fasta", "schemename": "artic-pan-ebola", "schemeversion": "v1.0.0", "species": [ @@ -86,13 +86,13 @@ "ARTIC", "WASTE-WATER" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v1.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "578f9cb933e01de0f3e9921cec14e5dc", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v1.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v1.0.0", "species": [ @@ -117,13 +117,13 @@ "ARTIC", "WASTE-WATER" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v2.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v2.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "1c0a95ccccf7be15642bc385cb5e5deb", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v2.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v2.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v2.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v2.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v2.0.0", "species": [ @@ -148,13 +148,13 @@ "QUICK-LAB", "WASTE-WATER" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v3.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v3.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "eff5fc84416bfbe998e336eafe8da50c", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v3.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v3.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v3.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v3.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v3.0.0", "species": [ @@ -177,13 +177,13 @@ "WHOLE-GENOME", "ARTIC" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "abbf6afccda4d8b737c59c8ec3373d94", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v4.0.0", "species": [ @@ -208,13 +208,13 @@ "ARTIC", "QUICK-LAB" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.1.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.1.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "019a9aa7d924344ef344316bb9a9172a", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.1.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.1.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.1.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.1.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v4.1.0", "species": [ @@ -237,13 +237,13 @@ "WHOLE-GENOME", "WASTE-WATER" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "409cd97bae3cf62207311f6e2f52f841", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v5.0.0", "species": [ @@ -266,13 +266,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.2.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.2.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "3dcc7210e679c4629f386696d9d7a00e", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.2.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.2.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.2.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.2.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v5.2.0", "species": [ @@ -296,13 +296,13 @@ "WASTE-WATER", "ARTIC" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.3.2/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.3.2/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "fe65441b1a9c08dc3a5e638d8c13a140", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.3.2/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.3.2/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.3.2/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.3.2/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v5.3.2", "species": [ @@ -327,13 +327,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "f1874f2b2332dff4b4cd6f0075f128dd", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "ba8c5fbd0d52e6d682ee6062bc517ad9", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.0.0/reference.fasta", "schemename": "hbv", "schemeversion": "v1.0.0", "species": [ @@ -354,13 +354,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.1.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "dd96ade2e5c59377808368cc116a8361", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.1.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "ba8c5fbd0d52e6d682ee6062bc517ad9", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.1.0/reference.fasta", "schemename": "hbv", "schemeversion": "v1.1.0", "species": [ @@ -384,13 +384,13 @@ "WHOLE-GENOME", "QUICK-LAB" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "cc26865ef9128cce73cfa2c0919790ec", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "b0c81b63db38a860016236b68977f38e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.0.0/reference.fasta", "schemename": "hbv", "schemeversion": "v2.0.0", "species": [ @@ -412,13 +412,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.1.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.1.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "5af354939e06acc830f7f340720a94b1", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.1.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.1.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "b0c81b63db38a860016236b68977f38e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.1.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.1.0/reference.fasta", "schemename": "hbv", "schemeversion": "v2.1.0", "species": [ @@ -444,13 +444,13 @@ "WASTE-WATER", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hev/400/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hev/400/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "ade0aa4af6881675ffc2203377550bec", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hev/400/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hev/400/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "fd028d0c1bda3584965792fb57cec0a5", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hev/400/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hev/400/v1.0.0/reference.fasta", "schemename": "hev", "schemeversion": "v1.0.0", "species": [ @@ -475,13 +475,13 @@ "WHOLE-GENOME", "QUICK-LAB" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/mers-cov/400/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/mers-cov/400/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "6853274c2b5b338e7616c99bacef63aa", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/mers-cov/400/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/mers-cov/400/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "6013c953b7924764d8d1ffe9027bc930", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/mers-cov/400/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/mers-cov/400/v1.0.0/reference.fasta", "schemename": "mers-cov", "schemeversion": "v1.0.0", "species": [ @@ -506,13 +506,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/norovirus-gii/800/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "3191ec8a80f14a5688d561fe2cf77e34", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/norovirus-gii/800/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "d128fe1bf5abe0d68f0f33ecccd4b79e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/norovirus-gii/800/v1.0.0/reference.fasta", "schemename": "norovirus-gii", "schemeversion": "v1.0.0", "species": [ @@ -534,13 +534,13 @@ ], "citations": [], "collections": [], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/pan-measles/1000/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/pan-measles/1000/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "0be34569ff26f64d1c4b801661f90c9f", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/pan-measles/1000/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/pan-measles/1000/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "2c3dd74742a333dffb50bcfbd158bfbd", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/pan-measles/1000/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/pan-measles/1000/v1.0.0/reference.fasta", "schemename": "pan-measles", "schemeversion": "v1.0.0", "species": [ @@ -566,13 +566,13 @@ "PANEL", "QUICK-LAB" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "5de2031db0062acbc75b2ad7d3de40f4", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "864e27657ef9b0e70182b6de7234c440", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/reference.fasta", "schemename": "who-tb-amr-panel", "schemeversion": "v1.0.0", "species": [ @@ -594,13 +594,13 @@ "PANEL", "MODJADJI" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "9837df01172dce6ac2d3c4243eac748f", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "864e27657ef9b0e70182b6de7234c440", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/reference.fasta", "schemename": "who-tb-amr-panel", "schemeversion": "v2.0.0", "species": [ From 1f348114f6648d7f91436fda24a898f4b121b7a6 Mon Sep 17 00:00:00 2001 From: ChrisKent Date: Tue, 19 Mar 2024 16:08:03 +0000 Subject: [PATCH 2/3] Added rsva-rsvb/1000/v1.0.0 --- primerschemes/rsva-rsvb/1000/v1.0.0/README.md | 47 ++ primerschemes/rsva-rsvb/1000/v1.0.0/info.json | 27 ++ .../rsva-rsvb/1000/v1.0.0/primer.bed | 315 +++++++++++++ .../rsva-rsvb/1000/v1.0.0/reference.fasta | 439 +++++++++++++++++ .../1000/v1.0.0/work/NC_001781.1.fasta | 220 +++++++++ .../1000/v1.0.0/work/NC_038235.1.fasta | 220 +++++++++ .../rsva-rsvb/1000/v1.0.0/work/ref.fasta | 440 ++++++++++++++++++ 7 files changed, 1708 insertions(+) create mode 100644 primerschemes/rsva-rsvb/1000/v1.0.0/README.md create mode 100644 primerschemes/rsva-rsvb/1000/v1.0.0/info.json create mode 100644 primerschemes/rsva-rsvb/1000/v1.0.0/primer.bed create mode 100644 primerschemes/rsva-rsvb/1000/v1.0.0/reference.fasta create mode 100644 primerschemes/rsva-rsvb/1000/v1.0.0/work/NC_001781.1.fasta create mode 100644 primerschemes/rsva-rsvb/1000/v1.0.0/work/NC_038235.1.fasta create mode 100644 primerschemes/rsva-rsvb/1000/v1.0.0/work/ref.fasta diff --git a/primerschemes/rsva-rsvb/1000/v1.0.0/README.md b/primerschemes/rsva-rsvb/1000/v1.0.0/README.md new file mode 100644 index 0000000..4befb9d --- /dev/null +++ b/primerschemes/rsva-rsvb/1000/v1.0.0/README.md @@ -0,0 +1,47 @@ +# rsva-rsvb 1000bp v1.0.0 + +## Description + +A Scheme for RSVA and RSVB. Schemes can be used separately or multiplexed + +## Overviews + +## Details + +```json +{ + "ampliconsize": 1000, + "schemeversion": "v1.0.0", + "schemename": "rsva-rsvb", + "primer_bed_md5": "8c710359de1fbf4c57dc93e466ae3125", + "reference_fasta_md5": "e2ca3da2ff7d2290cd2011d031ec7744", + "status": "tested", + "citations": [], + "authors": [ + "BCCDC", + "Quick-lab" + ], + "algorithmversion": "primalscheme3:0.1.0", + "species": [ + 11250 + ], + "license": "CC BY-SA 4.0", + "primerclass": "primerschemes", + "infoschema": "v1.3.0", + "articbedversion": "v3.0", + "description": "A Scheme for RSVA and RSVB. Schemes can be used separately or multiplexed", + "derivedfrom": null, + "collections": [ + "WHOLE-GENOME", + "MULTI-TARGET" + ] +} +``` + + + +------------------------------------------------------------------------ + +This work is licensed under a [Creative Commons Attribution-ShareAlike 4.0 International License](http://creativecommons.org/licenses/by-sa/4.0/) + +![](https://i.creativecommons.org/l/by-sa/4.0/88x31.png) \ No newline at end of file diff --git a/primerschemes/rsva-rsvb/1000/v1.0.0/info.json b/primerschemes/rsva-rsvb/1000/v1.0.0/info.json new file mode 100644 index 0000000..d4154ed --- /dev/null +++ b/primerschemes/rsva-rsvb/1000/v1.0.0/info.json @@ -0,0 +1,27 @@ +{ + "ampliconsize": 1000, + "schemeversion": "v1.0.0", + "schemename": "rsva-rsvb", + "primer_bed_md5": "8c710359de1fbf4c57dc93e466ae3125", + "reference_fasta_md5": "e2ca3da2ff7d2290cd2011d031ec7744", + "status": "tested", + "citations": [], + "authors": [ + "BCCDC", + "Quick-lab" + ], + "algorithmversion": "primalscheme3:0.1.0", + "species": [ + 11250 + ], + "license": "CC BY-SA 4.0", + "primerclass": "primerschemes", + "infoschema": "v1.3.0", + "articbedversion": "v3.0", + "description": "A Scheme for RSVA and RSVB. Schemes can be used separately or multiplexed", + "derivedfrom": null, + "collections": [ + "WHOLE-GENOME", + "MULTI-TARGET" + ] +} \ No newline at end of file diff --git a/primerschemes/rsva-rsvb/1000/v1.0.0/primer.bed b/primerschemes/rsva-rsvb/1000/v1.0.0/primer.bed new file mode 100644 index 0000000..e199e6f --- /dev/null +++ b/primerschemes/rsva-rsvb/1000/v1.0.0/primer.bed @@ -0,0 +1,315 @@ +NC_038235.1 102 128 RSVA_1_LEFT_0 1 + ACAGCAACTCATTGAGCATGATAAAA +NC_038235.1 102 128 RSVA_1_LEFT_1 1 + GCAGCAACTCACTGAGTATGATAAAA +NC_038235.1 102 128 RSVA_1_LEFT_2 1 + GCAGCAACTCATTGAGCATGATAAAA +NC_038235.1 102 128 RSVA_1_LEFT_3 1 + GCAGCAACTCATTGGGTATGATAAAA +NC_038235.1 101 128 RSVA_1_LEFT_4 1 + GGCAGCAACTCATTGAGTATGATAAAA +NC_038235.1 101 128 RSVA_1_LEFT_5 1 + GGCAGCAACTCATTGAGTATGTTAAAA +NC_038235.1 101 128 RSVA_1_LEFT_6 1 + GGCAGCAATTCATTGAGTATGATAAAA +NC_038235.1 100 128 RSVA_1_LEFT_7 1 + GGGCAGCAATTCATTAAGTATGATAAAA +NC_038235.1 1096 1126 RSVA_1_RIGHT_0 1 - CATCCTTCATCTTATGTCTCTCCTTAATT +NC_038235.1 1096 1125 RSVA_1_RIGHT_1 1 - CATCTTTCATCTTATGTCCCTCCTTAATT +NC_038235.1 1096 1126 RSVA_1_RIGHT_2 1 - CCATCTTTCATCTTATGTCTCTCCTTAATT +NC_038235.1 1095 1127 RSVA_1_RIGHT_3 1 - CCCATCTTCTATCTTATATCTCTCCTTAAGTT +NC_038235.1 1096 1127 RSVA_1_RIGHT_4 1 - CCCATCTTTCATATTATGTCTCTCCTTAATT +NC_038235.1 1096 1127 RSVA_1_RIGHT_5 1 - CCCATCTTTCATCTTATGTCTTTCCTTAATT +NC_038235.1 1096 1128 RSVA_1_RIGHT_6 1 - CCCCATCTTCTATCTTATATCTCTCCTTAATT +NC_038235.1 649 674 RSVA_2_LEFT_0 2 + ATACACCACAAAGACTGATGATCAC +NC_038235.1 650 674 RSVA_2_LEFT_1 2 + CACACCACAAAGACTGATGATCAC +NC_038235.1 649 674 RSVA_2_LEFT_2 2 + CTACACCACAAAGACTGATGATCAC +NC_038235.1 644 674 RSVA_2_LEFT_3 2 + TGATAATACACCACAAAGACTGATGATTAC +NC_038235.1 1547 1573 RSVA_2_RIGHT_1 2 - ACCTCTCCCATTTCTTTTAGCATCTT +NC_038235.1 1547 1573 RSVA_2_RIGHT_2 2 - ACCTCTCCCATTTCTTTTAGCATTTT +NC_038235.1 1547 1572 RSVA_2_RIGHT_3 2 - CCTCCCCCATTTCTTTTAGCATTTT +NC_038235.1 1547 1572 RSVA_2_RIGHT_8 2 - CTTCGCCCATTTCTTTAAGCATTTT +NC_038235.1 1474 1501 RSVA_3_LEFT_0 1 + AGTGTTAACATTAGCAAGCTTAACAAC +NC_038235.1 1475 1501 RSVA_3_LEFT_11 1 + GTGTTAACGTTAGCAAGCTTAACAAC +NC_038235.1 1477 1501 RSVA_3_LEFT_13 1 + GTTAACACTGGCAAGCTTAACAAC +NC_038235.1 1476 1501 RSVA_3_LEFT_19 1 + TGTTAACATTGGCAAGCTTAACAAC +NC_038235.1 1474 1501 RSVA_3_LEFT_3 1 + AGTTTTAACATTGGCAAGCTTAACAAC +NC_038235.1 1472 1501 RSVA_3_LEFT_4 1 + GAAGTTTTAACATTAGCAAGCTTAACAAC +NC_038235.1 1475 1501 RSVA_3_LEFT_5 1 + GTGTTAACACTCGCTAGCTTAACTAC +NC_038235.1 2367 2393 RSVA_3_RIGHT_1 1 - CCTATTATTTGCGTCTTCTCCATGGA +NC_038235.1 2367 2392 RSVA_3_RIGHT_2 1 - CTATTGTTTGCATCTTCTCCATGGA +NC_038235.1 2367 2392 RSVA_3_RIGHT_3 1 - CTGTTATTTGCATCTTCTCCATGGA +NC_038235.1 2367 2390 RSVA_3_RIGHT_4 1 - GTTGTTTGCATCTTCTCCATGGA +NC_038235.1 2367 2390 RSVA_3_RIGHT_5 1 - GTTGTTTGCGTCTTCTCCATGAA +NC_038235.1 2367 2388 RSVA_3_RIGHT_7 1 - TGTTTGCGTCTTCTCCATGGA +NC_038235.1 2122 2142 RSVA_4_LEFT_0 2 + AGCTGGCCTAGGCATAATGG +NC_038235.1 2120 2142 RSVA_4_LEFT_1 2 + GCTGCTGGTCTAGGCATAATGG +NC_038235.1 2122 2142 RSVA_4_LEFT_2 2 + TGCTGGCCTAGGCATAATGG +NC_038235.1 3102 3128 RSVA_4_RIGHT_0 2 - GGTTTGTTTGTTGGTTTTCTACTGGT +NC_038235.1 3102 3128 RSVA_4_RIGHT_1 2 - GGTTTGTTTGTTGGTTTTCTATTGGT +NC_038235.1 3102 3127 RSVA_4_RIGHT_2 2 - GTTAGTTTGTTGGTCTTCTGTTGGT +NC_038235.1 3102 3127 RSVA_4_RIGHT_3 2 - GTTTGTTTGTTGGCTTTCTATTGGT +NC_038235.1 3102 3129 RSVA_4_RIGHT_4 2 - TGGTTTGTTTGTTGGTCTTCTATTGAT +NC_038235.1 3102 3124 RSVA_4_RIGHT_5 2 - TGTTTGTCGGTCTTCTGTTGGT +NC_038235.1 3102 3126 RSVA_4_RIGHT_6 2 - TTTGTTTGTTGGTCTTCTGTTGGT +NC_038235.1 3055 3080 RSVA_5_LEFT_0 1 + ACTTGAAGATTTCTGATTAGCCACC +NC_038235.1 3054 3080 RSVA_5_LEFT_1 1 + CACTTGAAGATTTCTGATCAGCTACC +NC_038235.1 3054 3080 RSVA_5_LEFT_2 1 + CACTTGAGGATTTCTGATCAGTTACC +NC_038235.1 3053 3080 RSVA_5_LEFT_3 1 + TCACTCGAAGATTTCTGATTAGTTACC +NC_038235.1 3053 3080 RSVA_5_LEFT_4 1 + TCACTTGAAGATTTCTGATCAGTTACC +NC_038235.1 3053 3080 RSVA_5_LEFT_5 1 + TCACTTGAAGATTTCTGATTAGCTACC +NC_038235.1 3049 3080 RSVA_5_LEFT_6 1 + TCTATCACTTGAAGATTTCTGATTAGTTACC +NC_038235.1 4005 4029 RSVA_5_RIGHT_0 1 - AATCTTCCATGGGTTTGATTGCAA +NC_038235.1 4005 4033 RSVA_5_RIGHT_1 1 - GGTTAATCTTCCATAGGTTTGATTGCAA +NC_038235.1 4005 4033 RSVA_5_RIGHT_2 1 - GGTTAATCTTCTATGGGTTTGATTGCAA +NC_038235.1 4005 4027 RSVA_5_RIGHT_3 1 - TCCTCCATGGGTTTGATTGCAA +NC_038235.1 4005 4027 RSVA_5_RIGHT_4 1 - TCTTCCATGGGTTTGATTGCGA +NC_038235.1 4005 4031 RSVA_5_RIGHT_5 1 - TTAATCCTCTATGGGTTTGATTGCAA +NC_038235.1 4005 4031 RSVA_5_RIGHT_6 1 - TTAATCTTCCATAGGTTTGATTGCGA +NC_038235.1 3889 3916 RSVA_6_LEFT_0 2 + AGGAGCATTCAAATACATAAAACCACA +NC_038235.1 3889 3916 RSVA_6_LEFT_1 2 + AGGAGCATTTAAATACATAAAGCCACA +NC_038235.1 3891 3916 RSVA_6_LEFT_2 2 + GAGCATTCAAATACATAAAGCCCCA +NC_038235.1 3890 3916 RSVA_6_LEFT_3 2 + GGAGCATTCAAATACATAAAACCCCA +NC_038235.1 3890 3916 RSVA_6_LEFT_4 2 + GGAGCATTCAAATACATAAAGCCACA +NC_038235.1 3891 3916 RSVA_6_LEFT_6 2 + GGGCATTCAAATACATAAAGCCACA +NC_038235.1 4815 4844 RSVA_6_RIGHT_0 2 - AAGTTGAGATTATCATTGCCAGAATAGAT +NC_038235.1 4815 4844 RSVA_6_RIGHT_1 2 - AGGTTGAGATTATCATTGCCAAAATAGAT +NC_038235.1 4815 4842 RSVA_6_RIGHT_10 2 - GTTGAGATTATCATTGCCAGAATGGAT +NC_038235.1 4815 4843 RSVA_6_RIGHT_16 2 - TGTTGAGATTATCATTGCGAGTATTGAT +NC_038235.1 4815 4844 RSVA_6_RIGHT_2 2 - AGGTTGAGATTATCATTGCCAATATAGAT +NC_038235.1 4815 4843 RSVA_6_RIGHT_7 2 - AGTTGATATTATCATTGCCAGAATGGAT +NC_038235.1 4815 4845 RSVA_6_RIGHT_8 2 - GAAGTTGAGATTATCATTGCCAAAATAGAT +NC_038235.1 4815 4842 RSVA_6_RIGHT_9 2 - GTTGAGATTATCATTGCCAAAATGGAT +NC_038235.1 4713 4736 RSVA_7_LEFT_10 1 + CGCCAAGACTCTAGAAAGGACCT +NC_038235.1 4713 4736 RSVA_7_LEFT_11 1 + CGCCAAGTCACTAGAAAAGACCT +NC_038235.1 4713 4736 RSVA_7_LEFT_12 1 + CGCTAAAACACTCGAAAGGACAT +NC_038235.1 4713 4736 RSVA_7_LEFT_15 1 + CGCTAAGACACTAGAAAGGACCT +NC_038235.1 4712 4736 RSVA_7_LEFT_18 1 + CTGCTAAGACACTAGAAAGGACCT +NC_038235.1 4714 4736 RSVA_7_LEFT_19 1 + GCCAAGACACTAGAAAGGACCT +NC_038235.1 4714 4736 RSVA_7_LEFT_20 1 + GCCAAGACACTAGAGAGGACCT +NC_038235.1 4712 4736 RSVA_7_LEFT_7 1 + CCGCTAAGACATTAGAAAGGACCT +NC_038235.1 4713 4736 RSVA_7_LEFT_9 1 + CGCCAAGACACTAGAAAAGACCT +NC_038235.1 5623 5651 RSVA_7_RIGHT_13 1 - CCCCAGAGTTGATTTTGATTCTGTTTTA +NC_038235.1 5623 5651 RSVA_7_RIGHT_14 1 - CCCCAGAGTTTATTTTGATTCTGTTTGA +NC_038235.1 5623 5651 RSVA_7_RIGHT_15 1 - CCCCATAGCTTATTTTGATTCTGTTTGA +NC_038235.1 5623 5651 RSVA_7_RIGHT_16 1 - CCCCATAGTTGATTTTGATTCTGTTTGA +NC_038235.1 5623 5652 RSVA_7_RIGHT_17 1 - GCCCCAAAGCTTATTTTTATTTTGTTTGA +NC_038235.1 5623 5652 RSVA_7_RIGHT_18 1 - GCCCCAGAGTTTATATTGATTCTATTTGA +NC_038235.1 5623 5652 RSVA_7_RIGHT_19 1 - GCCCCAGAGTTTATTTTGATTCTGTTTAA +NC_038235.1 5623 5650 RSVA_7_RIGHT_3 1 - CCCAAAGTTGATTTTGATTCTGTTTGA +NC_038235.1 5623 5650 RSVA_7_RIGHT_4 1 - CCCAGAGCTTATTTTGATTCTGTTTGA +NC_038235.1 5623 5650 RSVA_7_RIGHT_6 1 - CCCAGAGTTGATTTTGATTCTGTTTGA +NC_038235.1 5623 5650 RSVA_7_RIGHT_7 1 - CCCAGTGTTGATTTTGATTCTGTTTGA +NC_038235.1 5623 5650 RSVA_7_RIGHT_8 1 - CCCATAGTTGATTTTGGTTCTGTTTGA +NC_038235.1 5088 5118 RSVA_8_LEFT_0 2 + AAACATAACAACAACCCAAATATTACCTAG +NC_038235.1 5094 5118 RSVA_8_LEFT_1 2 + AACAACAACCCAAATATCACCCAG +NC_038235.1 5090 5118 RSVA_8_LEFT_11 2 + ACACAACAACAACCCAAATATTACCTAG +NC_038235.1 5092 5118 RSVA_8_LEFT_12 2 + ACACCAACAACCCAAATATTACCTAG +NC_038235.1 5096 5118 RSVA_8_LEFT_14 2 + CAACAACCCAAACCCAACCTAG +NC_038235.1 5096 5118 RSVA_8_LEFT_16 2 + CAACAACTCAAGCACAACCCAA +NC_038235.1 5091 5118 RSVA_8_LEFT_17 2 + CATAACAACAACCCAAATATTACCCAG +NC_038235.1 5097 5118 RSVA_8_LEFT_3 2 + AACAACCCAAACACAACCCAG +NC_038235.1 5092 5118 RSVA_8_LEFT_4 2 + ACAACAACAACCCAAATACAACCTAG +NC_038235.1 5092 5118 RSVA_8_LEFT_5 2 + ACAACAACAACCCAAATATCACCTAG +NC_038235.1 5092 5118 RSVA_8_LEFT_6 2 + ACAACAACAACCCAAATATTACCCAG +NC_038235.1 5095 5118 RSVA_8_LEFT_8 2 + ACAACAACCCAAATACAACCCAG +NC_038235.1 5095 5118 RSVA_8_LEFT_9 2 + ACAACAACTCAAACACAACCCAG +NC_038235.1 5925 5951 RSVA_8_RIGHT_11 2 - CATTAGCAACTGCAATTCTGTTACAG +NC_038235.1 5925 5952 RSVA_8_RIGHT_18 2 - GCATGAGCAATTGTAATTCTGTTACAG +NC_038235.1 5925 5949 RSVA_8_RIGHT_25 2 - TGAGCAACTGCAATTCTGTTACAG +NC_038235.1 5925 5950 RSVA_8_RIGHT_6 2 - ATTAACAATTGCAATTCGGTTACGG +NC_038235.1 5668 5692 RSVA_9_LEFT_0 1 + GCCAATCCTCAAAACAAATGCAAT +NC_038235.1 5668 5692 RSVA_9_LEFT_1 1 + GCCAATTATCAAAGCGAATGCAAT +NC_038235.1 5665 5692 RSVA_9_LEFT_2 1 + GTTGCCAATCCTCAAAATAAATGCTAT +NC_038235.1 5667 5692 RSVA_9_LEFT_3 1 + TGCCAATCCTCAAAACAAATGCTAT +NC_038235.1 5667 5692 RSVA_9_LEFT_4 1 + TGCTAATCCTCAAAGCAAATGCAAT +NC_038235.1 6618 6646 RSVA_9_RIGHT_16 1 - CCTTCTTTTGTGTTGGTTGTACATAGAG +NC_038235.1 6618 6642 RSVA_9_RIGHT_17 1 - CCTTTGTGTTGGTTGTACAGAGAG +NC_038235.1 6618 6642 RSVA_9_RIGHT_18 1 - CCTTTGTGTTGGTTGTACATAGGG +NC_038235.1 6618 6642 RSVA_9_RIGHT_19 1 - CCTTTGTGTTGGTTGTGCATAGAG +NC_038235.1 6618 6642 RSVA_9_RIGHT_20 1 - CCTTTGTGTTGGTTGTGCATAGTG +NC_038235.1 6618 6645 RSVA_9_RIGHT_21 1 - CTTCCTTTGTGTTGGTTGTACATAAAG +NC_038235.1 6618 6647 RSVA_9_RIGHT_25 1 - TCCCTCTTTTGTATTAGTTGTACATAGTG +NC_038235.1 6618 6643 RSVA_9_RIGHT_29 1 - TCCTTTGTGTTGGTTGTACATAGTG +NC_038235.1 6618 6644 RSVA_9_RIGHT_30 1 - TTCCTTTGTGTTGGTTGTACATAGAG +NC_038235.1 6166 6193 RSVA_10_LEFT_12 2 + CGCACTATTATCAACTAATAAGGCAGT +NC_038235.1 6168 6193 RSVA_10_LEFT_25 2 + CTCTACTATCCACTAACAAGGCTGT +NC_038235.1 6168 6193 RSVA_10_LEFT_30 2 + CTTTACTATCCACAAACAAGGCTGT +NC_038235.1 6167 6193 RSVA_10_LEFT_48 2 + GCTCTACTATCAACAAACAAGGCTGT +NC_038235.1 6167 6193 RSVA_10_LEFT_53 2 + GCTCTACTATCCACAAACAAAGCTGT +NC_038235.1 6167 6193 RSVA_10_LEFT_55 2 + GCTCTACTATCCACAAATAAGGCTGT +NC_038235.1 6167 6193 RSVA_10_LEFT_63 2 + GCTCTATTATCCACAAACAAGGCTGT +NC_038235.1 6169 6193 RSVA_10_LEFT_73 2 + TCTACTATCCACAAACAAGGCTGT +NC_038235.1 7092 7116 RSVA_10_RIGHT_11 2 - CAGAGGGGAATACTAATGGGTCAT +NC_038235.1 7092 7119 RSVA_10_RIGHT_14 2 - CATCAGAGGGGAATACTAATGGATCAT +NC_038235.1 7092 7116 RSVA_10_RIGHT_24 2 - CGGAGGGGAATACTAATGGGTCAT +NC_038235.1 7092 7116 RSVA_10_RIGHT_25 2 - CGGATGGAAACACTAATGGATCGT +NC_038235.1 7092 7114 RSVA_10_RIGHT_38 2 - GAGGGGAACACTAATGGATCGT +NC_038235.1 7092 7114 RSVA_10_RIGHT_39 2 - GAGGGGAACACTAATGGGTCAT +NC_038235.1 7092 7116 RSVA_10_RIGHT_5 2 - CAGAAGGGAACACTAATGGGTCAT +NC_038235.1 7092 7117 RSVA_10_RIGHT_53 2 - TCAGAGGGAAACACTAATGGATCAT +NC_038235.1 7092 7117 RSVA_10_RIGHT_58 2 - TCAGATGGGAACACTAATGGATCAT +NC_038235.1 7092 7116 RSVA_10_RIGHT_9 2 - CAGAGGGGAACACTAATGGATCAT +NC_038235.1 6717 6739 RSVA_11_LEFT_0 1 + CACAAGCTGACACATGCAAAGT +NC_038235.1 6716 6739 RSVA_11_LEFT_1 1 + CCACAAGCCGAAACATGTAAAGT +NC_038235.1 6716 6739 RSVA_11_LEFT_2 1 + CCACAAGCTGAAACATGCAAAGT +NC_038235.1 6716 6739 RSVA_11_LEFT_3 1 + CCACAAGCTGAAACGTGTAAAGT +NC_038235.1 6715 6739 RSVA_11_LEFT_4 1 + CCCACAAGCTGAAACATGTAAAGT +NC_038235.1 6715 6739 RSVA_11_LEFT_5 1 + CCCACAAGCTGAGACATGTAAAGT +NC_038235.1 6714 6739 RSVA_11_LEFT_6 1 + TTCCACAAGCTGAAACATGTAAAGT +NC_038235.1 7671 7700 RSVA_11_RIGHT_0 1 - GGTGGCCATTCAAAATAATTATGACTAAA +NC_038235.1 7671 7699 RSVA_11_RIGHT_1 1 - GTGGCCATTCAAAATAATTATGACTGAA +NC_038235.1 7671 7699 RSVA_11_RIGHT_2 1 - GTGGCCATTCAAAATAATTGTGACTAAA +NC_038235.1 7614 7640 RSVA_12_LEFT_0 2 + AGGAATCCTTGCAAATTTGAAATTCG +NC_038235.1 7611 7640 RSVA_12_LEFT_1 2 + CGAAGGAATCCTTGCAAATTTGAAATTAG +NC_038235.1 7616 7640 RSVA_12_LEFT_2 2 + GAATCCCTGCAAATTCGAAATTCG +NC_038235.1 7615 7640 RSVA_12_LEFT_3 2 + GGAATCCTTGCAAATTCGAAATTCG +NC_038235.1 8608 8638 RSVA_12_RIGHT_0 2 - GTTAGTGTAATCATTTTTGAGATAAGGACC +NC_038235.1 8608 8638 RSVA_12_RIGHT_1 2 - GTTGGTATAATCATTTTTGAGATAAGGACC +NC_038235.1 8608 8636 RSVA_12_RIGHT_2 2 - TGGTGTAATCATTTTTGAGATAAGGACC +NC_038235.1 8468 8494 RSVA_13_LEFT_0 1 + AAATCAAACAATTCAAGTTGTGGGAC +NC_038235.1 8468 8494 RSVA_13_LEFT_1 1 + AACTCAAACAATTCAAATCATGGGAC +NC_038235.1 8468 8494 RSVA_13_LEFT_2 1 + AATTCAAACAATTCAAGTTGTGGGAC +NC_038235.1 8469 8494 RSVA_13_LEFT_3 1 + ACTCAAACAATTCAAACCATGGGAC +NC_038235.1 8469 8494 RSVA_13_LEFT_4 1 + ACTCAAACAATTCAAGCTATGGGAC +NC_038235.1 8469 8494 RSVA_13_LEFT_5 1 + ACTCAAACAATTCATACCATGGGAC +NC_038235.1 8471 8494 RSVA_13_LEFT_6 1 + TCAAACAATTCAAGCCATGGGAC +NC_038235.1 8466 8494 RSVA_13_LEFT_8 1 + TTAATTCAAACAATTCAAGCTATGGGAC +NC_038235.1 9389 9412 RSVA_13_RIGHT_0 1 - AAATCCGCATCTTAAGCCTAAGC +NC_038235.1 9389 9419 RSVA_13_RIGHT_1 1 - CATTATTGAATCCACATCTTAAACCTAAGC +NC_038235.1 9389 9412 RSVA_13_RIGHT_2 1 - GAATCCGCATCTTAAGCCTAAGC +NC_038235.1 9389 9414 RSVA_13_RIGHT_3 1 - TTGAATCCACATCTTAAGCCTAAGC +NC_038235.1 9308 9341 RSVA_14_LEFT_0 2 + CATGGAAAGATATTAGCCTTAGTAGATTAAATG +NC_038235.1 9309 9341 RSVA_14_LEFT_1 2 + GTGGAAAGATATTAGCCTTAGTAGATTAAATG +NC_038235.1 9310 9341 RSVA_14_LEFT_2 2 + TGGAAAGATATTAGCCTCAGTAGATTAAATG +NC_038235.1 9310 9341 RSVA_14_LEFT_3 2 + TGGAAAGATATTAGCCTTAGTAGATTGAATG +NC_038235.1 10217 10245 RSVA_14_RIGHT_0 2 - AATACTCTTCTTGATTTATCACTCTCGG +NC_038235.1 10217 10250 RSVA_14_RIGHT_1 2 - ACTCTAATACTCTTCTTGATTTATCACTATCAG +NC_038235.1 10217 10248 RSVA_14_RIGHT_2 2 - TCTAATACTCTTCTTGATTTATCACTCTCAG +NC_038235.1 10155 10180 RSVA_15_LEFT_0 1 + CCCTAGAAATTACATGCCATCACAC +NC_038235.1 10155 10180 RSVA_15_LEFT_1 1 + CCCTAGAAATTATATGCCGTCACAC +NC_038235.1 10151 10180 RSVA_15_LEFT_2 1 + GTTTTCCTAGAAATTATATGCCATCACAC +NC_038235.1 10153 10180 RSVA_15_LEFT_3 1 + TTCCCTAGAAATTATATGCCATCACAC +NC_038235.1 10154 10180 RSVA_15_LEFT_4 1 + TTCCTAGAAATTATATGCCGTCACAC +NC_038235.1 11138 11167 RSVA_15_RIGHT_0 1 - CACTCTTAGGACTTTCTTTATACTAGCTG +NC_038235.1 11138 11168 RSVA_15_RIGHT_1 1 - CCACTCTTAGAACTTTCTTTATACTAGCTG +NC_038235.1 11138 11168 RSVA_15_RIGHT_2 1 - CTACTCTTAGGACTTTCTTAATACTAGCTG +NC_038235.1 10924 10956 RSVA_16_LEFT_0 2 + GGTGACAATCAATCAATAGATATAAGTAAACC +NC_038235.1 10926 10956 RSVA_16_LEFT_1 2 + TGACAATCAATCAATAGATATAAGCAAACC +NC_038235.1 11858 11886 RSVA_16_RIGHT_0 2 - GGTAAACTTTCATAAACAACTCTTAGCC +NC_038235.1 11786 11814 RSVA_17_LEFT_0 1 + CACAACACTATACCACTACAGAGATAGA +NC_038235.1 11785 11814 RSVA_17_LEFT_1 1 + GCACAACATTATACCACTACAGAGATAGA +NC_038235.1 11784 11814 RSVA_17_LEFT_2 1 + TGCACAACATTATACTACTACAGAGATAGA +NC_038235.1 12782 12812 RSVA_17_RIGHT_0 1 - CTTGTTTTAACTTGTGAATATCAACATCAC +NC_038235.1 12719 12751 RSVA_18_LEFT_0 2 + ACAGAATTATTCTCATACCTAAGCTTAATGAG +NC_038235.1 12721 12751 RSVA_18_LEFT_1 2 + AGAATTATACTCATACCCAAGCTTAATGAG +NC_038235.1 12721 12751 RSVA_18_LEFT_2 2 + AGAATTATTCTCATACCCAAGCTTAATGAG +NC_038235.1 12724 12751 RSVA_18_LEFT_3 2 + ATTATTCTCATACCCAAGCTCAATGAG +NC_038235.1 12720 12751 RSVA_18_LEFT_4 2 + CAGAATTATTCTCATACCCAAACTTAATGAG +NC_038235.1 13629 13658 RSVA_18_RIGHT_0 2 - CCGGATTGGTTAATATATTTTCTAGGGTT +NC_038235.1 13629 13658 RSVA_18_RIGHT_1 2 - CCGGATTGGTTAGTATATTTTCTAAGGTT +NC_038235.1 13629 13658 RSVA_18_RIGHT_2 2 - CCGGATTGGTTAGTATATTTTCTAGAGTT +NC_038235.1 13629 13657 RSVA_18_RIGHT_3 2 - CGGATTGGTTAATATGTTTTCTAGGGTT +NC_038235.1 13629 13657 RSVA_18_RIGHT_4 2 - CGGATTGGTTAGTATACTTTCTAGGGTT +NC_038235.1 13629 13657 RSVA_18_RIGHT_5 2 - CGGATTGGTTAGTATATTTTCTAGGGTT +NC_038235.1 13629 13656 RSVA_18_RIGHT_6 2 - GGATTGGCTAGTATATTCTCTAGGGTT +NC_038235.1 13629 13656 RSVA_18_RIGHT_7 2 - GGATTGGTTAGTATGTTTTCTAGGGTT +NC_038235.1 13325 13353 RSVA_19_LEFT_0 1 + GGTTTCTTAAACGTCTTAATGTAGCAGA +NC_038235.1 13326 13353 RSVA_19_LEFT_1 1 + GTTTCTTAAGCGTCTTAATGTAGCAGA +NC_038235.1 13327 13353 RSVA_19_LEFT_2 1 + TTTCTTAAACGTCTTAATGTGGCAGA +NC_038235.1 14228 14253 RSVA_19_RIGHT_0 1 - CAATGAATGTTGTTGGTTGCATCTG +NC_038235.1 13774 13800 RSVA_20_LEFT_0 2 + ACCAATTACAGCAGACAAGATTTGTA +NC_038235.1 13772 13800 RSVA_20_LEFT_1 2 + GAACCAATTACAGCAAACAAGATTTGTA +NC_038235.1 14762 14790 RSVA_20_RIGHT_0 2 - AGTTTATTGCTGAAAACTTCATTACGTC +NC_001781.1 89 113 RSVB_1_LEFT_0 2 + CAATCAGAAATGGGGTGCAATTCA +NC_001781.1 90 113 RSVB_1_LEFT_1 2 + GATCAGAAATGGGGTGCAATTCA +NC_001781.1 88 113 RSVB_1_LEFT_2 2 + TTAATCAGAAATGGGGTGCAATTCA +NC_001781.1 86 113 RSVB_1_LEFT_3 2 + TTTATCAGAAATGGGGTGCAATTCA +NC_001781.1 1028 1055 RSVB_1_RIGHT_0 2 - ACTGTTGTTTAGAGAATTGCTTGGTT +NC_001781.1 1028 1054 RSVB_1_RIGHT_1 2 - ACTGTTGTTTGAGGAATAGTTTGGTT +NC_001781.1 1028 1056 RSVB_1_RIGHT_10 2 - TCACTGTTGTTTAAGGAATAGCTTAGTT +NC_001781.1 1028 1052 RSVB_1_RIGHT_11 2 - TGTTGTTTGGATAATGGCTTGGTT +NC_001781.1 1028 1053 RSVB_1_RIGHT_13 2 - TTGTTATTTGGAGAATGGCTTGGTT +NC_001781.1 1028 1053 RSVB_1_RIGHT_14 2 - TTGTTGTTTGAGGAATAGCTTGGTT +NC_001781.1 1028 1056 RSVB_1_RIGHT_2 2 - CACTGTTGTTTAGAGAATAGCTTGGTT +NC_001781.1 1028 1053 RSVB_1_RIGHT_4 2 - CTGTTGTTTGAGGAATAGCTTGGTT +NC_001781.1 1028 1053 RSVB_1_RIGHT_5 2 - CTGTTGTTTGGAGAATAGCTTGGTT +NC_001781.1 1028 1057 RSVB_1_RIGHT_6 2 - GCACTGTTGTTTAGAGAATAGCTTGATT +NC_001781.1 1028 1057 RSVB_1_RIGHT_7 2 - GCATTGTTGTTTAGAGAATAGCTTGGTT +NC_001781.1 1028 1051 RSVB_1_RIGHT_8 2 - GTTGTTTGGAGAATGGCTTGGTT +NC_001781.1 1028 1051 RSVB_1_RIGHT_9 2 - GTTGTTTGGGGAATAGCTTGGTT +NC_001781.1 254 286 RSVB_2_LEFT_0 2 + GGCATAGTTTTTATACATGTTATAACAAGCAG +NC_001781.1 1245 1274 RSVB_2_RIGHT_0 2 - GTTTAAGTGTTTTTGCACATCATAATTGG +NC_001781.1 1245 1272 RSVB_2_RIGHT_1 2 - TTAGGTGTTTTTGCACATCATAATTGG +NC_001781.1 1198 1226 RSVB_3_LEFT_0 1 + CAGCAAATACACTATTCAACGTAGTACA +NC_001781.1 1200 1226 RSVB_3_LEFT_1 1 + GCAAATACACCATTCAACGTAGTACA +NC_001781.1 2198 2222 RSVB_3_RIGHT_0 1 - TCCATTTTCTTTGAGTTGCTCTGC +NC_001781.1 2122 2142 RSVB_4_LEFT_0 2 + AGCAGGCCTAGGCATAATGG +NC_001781.1 2120 2142 RSVB_4_LEFT_1 2 + GCAGCAGGTCTAGGCATAATGG +NC_001781.1 3093 3122 RSVB_4_RIGHT_0 2 - GGTGTCTGTTTTATTGATGTTGTTGATTG +NC_001781.1 3093 3122 RSVB_4_RIGHT_1 2 - GGTGTCTGTTTTATTGATGTTTTTGATTG +NC_001781.1 3093 3118 RSVB_4_RIGHT_2 2 - TCTGTTTTGTTGATGCTGTTGATTG +NC_001781.1 3093 3123 RSVB_4_RIGHT_3 2 - TGATGTCTGTTTTATTGATGTTGTTGATTG +NC_001781.1 3093 3123 RSVB_4_RIGHT_4 2 - TGGTGTCTATTTTATTGATGTTGTTGATTG +NC_001781.1 3093 3123 RSVB_4_RIGHT_5 2 - TGGTGTCTGTTTTATTGATGTTATTGATTG +NC_001781.1 3093 3120 RSVB_4_RIGHT_6 2 - TGTCTGTTTTGTTGATGTTGTTGATTG +NC_001781.1 2901 2928 RSVB_5_LEFT_0 1 + ATTAATGACCAATGATAGGTTAGAGGC +NC_001781.1 3810 3837 RSVB_5_RIGHT_0 1 - GCATTGGTGATAGCATTTTTGAATTCG +NC_001781.1 3753 3782 RSVB_6_LEFT_0 2 + AAGATCAATTAGTGTCAAAAACAAGGATC +NC_001781.1 3754 3782 RSVB_6_LEFT_1 2 + AGATCAATCAGTGTCAAAAACAAAGATC +NC_001781.1 3754 3782 RSVB_6_LEFT_2 2 + AGATCAATTAGTGTCAAGAACAAGGATC +NC_001781.1 3755 3782 RSVB_6_LEFT_3 2 + GATCAATCAGTGTCAAAAACAAGGATC +NC_001781.1 3755 3782 RSVB_6_LEFT_4 2 + GATCAATTAGTGTCAAAAACAAGGACC +NC_001781.1 4733 4762 RSVB_6_RIGHT_0 2 - CAATTAGATGATTAAGAGTATCCCAGGTC +NC_001781.1 4733 4759 RSVB_6_RIGHT_1 2 - TTAGATGATTGAGAGTATCCCAGGTC +NC_001781.1 4325 4349 RSVB_7_LEFT_0 1 + AGAATTCACAAGCAAATTTTGGCC +NC_001781.1 5245 5270 RSVB_7_RIGHT_0 1 - GGTTTGTTGCTTGGTATTGTTTTGC +NC_001781.1 5245 5271 RSVB_7_RIGHT_1 1 - TGGTTTATTGCTTGGTATTGTTTTGC +NC_001781.1 5245 5271 RSVB_7_RIGHT_2 1 - TGGTTTGTTGCTTGGTATTGTTTTAC +NC_001781.1 5198 5222 RSVB_8_LEFT_1 2 + CGTTCCCTGTAGTATATGTGGCAA +NC_001781.1 5199 5222 RSVB_8_LEFT_2 2 + GTTCCCTGTAGTATCTGTGGCAA +NC_001781.1 5198 5222 RSVB_8_LEFT_3 2 + TGTTCCCTGTAGTATATGTGGCAA +NC_001781.1 5200 5222 RSVB_8_LEFT_4 2 + TTCCCTGCAGTATATGTGGCAA +NC_001781.1 5196 5222 RSVB_8_LEFT_5 2 + TTTGTTCCATGTAGTATATGTGGCAA +NC_001781.1 6121 6146 RSVB_8_RIGHT_0 2 - CAAGGTGTAGAACTTTGGATACAGC +NC_001781.1 6121 6147 RSVB_8_RIGHT_1 2 - TCAAGGTGTAGAACTTTTGATACAGC +NC_001781.1 6066 6089 RSVB_9_LEFT_0 1 + ACGAAGATTTCTGGGCTTCTTGT +NC_001781.1 6063 6089 RSVB_9_LEFT_1 1 + GAAACGAAGATTTCTAGGCTTCTTGT +NC_001781.1 7044 7065 RSVB_9_RIGHT_0 1 - AGGTTCTTGCCTTCCAGCTTG +NC_001781.1 7044 7065 RSVB_9_RIGHT_1 1 - AGGTTTTTGCCATCCAGCTTG +NC_001781.1 7044 7065 RSVB_9_RIGHT_2 1 - AGGTTTTTGCCTTCCAGCTTG +NC_001781.1 6983 7009 RSVB_10_LEFT_0 2 + ATTATGTGTCAAACAAAGGAGTGGAT +NC_001781.1 6982 7009 RSVB_10_LEFT_1 2 + GACTATGTGTCAAACAAAGGAGTAGAT +NC_001781.1 6981 7009 RSVB_10_LEFT_2 2 + TGATTATGTGTCAAACAAAGGAGTAGAC +NC_001781.1 6981 7009 RSVB_10_LEFT_3 2 + TGATTATGTGTCAAACAAAGGAGTAGAT +NC_001781.1 6979 7009 RSVB_10_LEFT_4 2 + TGTGATTATGTATCAAACAAAGGAGTAGAT +NC_001781.1 7904 7933 RSVB_10_RIGHT_0 2 - TCTCAATAAGAAGTTTACTCATAGCAACA +NC_001781.1 7831 7854 RSVB_11_LEFT_0 1 + ACGCTCTTGGTATAGTTGGAGTG +NC_001781.1 7827 7854 RSVB_11_LEFT_1 1 + GAATATGCTCTTGGTATAGTTGGAGTG +NC_001781.1 7832 7854 RSVB_11_LEFT_2 1 + TGCCCTTGGTATAGTTGGAGTG +NC_001781.1 8798 8822 RSVB_11_RIGHT_0 1 - GTAGCAATTTGTTCAGACGAGGAC +NC_001781.1 8602 8627 RSVB_12_LEFT_0 2 + GGAGTTACCTTTTTAACGGCCCTTA +NC_001781.1 8601 8627 RSVB_12_LEFT_1 2 + GGGAGTTATCTTTTTAACGGCCCTTA +NC_001781.1 9543 9573 RSVB_12_RIGHT_0 2 - TCGTTTCCTAAATTGATCTTCTTCTGTTAT +NC_001781.1 9316 9338 RSVB_13_LEFT_0 1 + TGACATGGAAAGACATCAGCCT +NC_001781.1 10237 10267 RSVB_13_RIGHT_0 1 - AGTAATACTCTAGTACTCTTCTTGATCTGT +NC_001781.1 10237 10266 RSVB_13_RIGHT_1 1 - GTAATACTCTAGTACTCTTCTCGATCTGT +NC_001781.1 10149 10182 RSVB_14_LEFT_0 2 + CTAATATGGACTAGTTTTCCTAGAAATTACATG +NC_001781.1 10155 10182 RSVB_14_LEFT_1 2 + TGGACTAGTTTTCCCAGAAATTACATG +NC_001781.1 11103 11128 RSVB_14_RIGHT_0 2 - GGATAGTTTTGCTCATGAACTGCAT +NC_001781.1 11103 11128 RSVB_14_RIGHT_1 2 - GGATTGTTTTGCTCATGAACTGCAT +NC_001781.1 11103 11128 RSVB_14_RIGHT_2 2 - GGATTGTTTTGCTCATGAATTGCAT +NC_001781.1 11103 11129 RSVB_14_RIGHT_3 2 - TGGATTGTTTTACTCATGAACTGCAT +NC_001781.1 11060 11081 RSVB_15_LEFT_0 1 + AGGCCATAAGCTCAAGGGAAC +NC_001781.1 11057 11081 RSVB_15_LEFT_1 1 + CATAGGCCATAAGCTTAAGGGAAC +NC_001781.1 11056 11081 RSVB_15_LEFT_2 1 + GCATAGGCCATAAGCTTAAAGGAAC +NC_001781.1 11055 11081 RSVB_15_LEFT_3 1 + GGTATAGGCCATAAGCTTAAGGGAAC +NC_001781.1 11967 11997 RSVB_15_RIGHT_0 1 - ATTAATATCAGTTGTATCTATCGCTGATGT +NC_001781.1 11967 12000 RSVB_15_RIGHT_1 1 - CCTATTAATATCAGTTGTATCTATTGCTGATGT +NC_001781.1 11742 11771 RSVB_16_LEFT_0 2 + TTAGCAGTAACAGAAGTCTTAAGTATAGC +NC_001781.1 12702 12728 RSVB_16_RIGHT_0 2 - GGACATATGTTTGTGAATTGTTCCAC +NC_001781.1 12614 12644 RSVB_17_LEFT_0 1 + TCATGTATTAACAGAAAAGTATGGAGATGA +NC_001781.1 13544 13568 RSVB_17_RIGHT_0 1 - AGCAGATGAGTGTTGTCTGAAAAG +NC_001781.1 13544 13571 RSVB_17_RIGHT_1 1 - GTTAGCAAATGAGTGTTGTCTGAAAAG +NC_001781.1 13405 13438 RSVB_18_LEFT_0 2 + CAACACACATGAAAGCTATATTATCTTACATAG +NC_001781.1 14308 14330 RSVB_18_RIGHT_0 2 - ACAGGTAATTCAGCATCGCAGA +NC_001781.1 14308 14331 RSVB_18_RIGHT_1 2 - GACAGGTAATTCAGCATCGCAAA +NC_001781.1 14308 14333 RSVB_18_RIGHT_2 2 - GTAACAGGTAATTCAGCATCACAGA +NC_001781.1 14308 14333 RSVB_18_RIGHT_3 2 - GTGACAGGTAATTCAGCATCACAAA +NC_001781.1 14308 14332 RSVB_18_RIGHT_4 2 - TGACAGGTAATTCAGCATCACAGA +NC_001781.1 13944 13970 RSVB_19_LEFT_0 1 + CTTCCTTGGCATCATGTCAATAGATT +NC_001781.1 14928 14958 RSVB_19_RIGHT_0 1 - CTTCTTAAGCTCATTGGTTGTTAAACTATT +NC_001781.1 14928 14956 RSVB_19_RIGHT_1 1 - TCTTGAGCTCATTGGTTGTTAAACTATT +NC_001781.1 14928 14953 RSVB_19_RIGHT_2 1 - TGAGCTCATTGGTTGTCAAACTATT \ No newline at end of file diff --git a/primerschemes/rsva-rsvb/1000/v1.0.0/reference.fasta b/primerschemes/rsva-rsvb/1000/v1.0.0/reference.fasta new file mode 100644 index 0000000..50a5028 --- /dev/null +++ b/primerschemes/rsva-rsvb/1000/v1.0.0/reference.fasta @@ -0,0 +1,439 @@ +>NC_038235.1 Human orthopneumovirus Subgroup A, complete cds +ACGCGAAAAAATGCGTACAACAAACTTGCATAAACCAAAAAAATGGGGCAAATAAGAATTTGATAAGTAC +CACTTAAATTTAACTCCCTTGGTTAGAGATGGGCAGCAATTCATTGAGTATGATAAAAGTTAGATTACAA +AATTTGTTTGACAATGATGAAGTAGCATTGTTAAAAATAACATGCTATACTGATAAATTAATACATTTAA +CTAACGCTTTGGCTAAGGCAGTGATACATACAATCAAATTGAATGGCATTGTGTTTGTGCATGTTATTAC +AAGTAGTGATATTTGCCCTAATAATAATATTGTAGTAAAATCCAATTTCACAACAATGCCAGTACTACAA +AATGGAGGTTATATATGGGAAATGATGGAATTAACACATTGCTCTCAACCTAATGGTCTACTAGATGACA +ATTGTGAAATTAAATTCTCCAAAAAACTAAGTGATTCAACAATGACCAATTATATGAATCAATTATCTGA +ATTACTTGGATTTGATCTTAATCCATAAATTATAATTAATATCAACTAGCAAATCAATGTCACTAACACC +ATTAGTTAATATAAAACTTAACAGAAGACAAAAATGGGGCAAATAAATCAATTCAGCCAACCCAACCATG +GACACAACCCACAATGATAATACACCACAAAGACTGATGATCACAGACATGAGACCGTTGTCACTTGAGA +CCATAATAACATCACTAACCAGAGACATCATAACACACAAATTTATATACTTGATAAATCATGAATGCAT +AGTGAGAAAACTTGATGAAAAACAGGCCACATTTACATTCCTGGTCAACTATGAAATGAAACTATTACAC +AAAGTAGGAAGCACTAAATATAAAAAATATACTGAATACAACACAAAATATGGCACTTTCCCTATGCCAA +TATTCATCAATCATGATGGGTTCTTAGAATGCATTGGCATTAAGCCTACAAAGCATACTCCCATAATATA +CAAGTATGATCTCAATCCATAAATTTCAACACAATATTCACACAATCTAAAACAACAACTCTATGCATAA +CTATACTCCATAGTCCAGATGGAGCCTGAAAATTATAGTAATTTAAAATTAAGGAGAGATATAAGATAGA +AGATGGGGCAAATACAAAGATGGCTCTTAGCAAAGTCAAGTTGAATGATACACTCAACAAAGATCAACTT +CTGTCATCCAGCAAATACACCATCCAACGGAGCACAGGAGATAGTATTGATACTCCTAATTATGATGTGC +AGAAACACATCAATAAGTTATGTGGCATGTTATTAATCACAGAAGATGCTAATCATAAATTCACTGGGTT +AATAGGTATGTTATATGCGATGTCTAGGTTAGGAAGAGAAGACACCATAAAAATACTCAGAGATGCGGGA +TATCATGTAAAAGCAAATGGAGTAGATGTAACAACACATCGTCAAGACATTAATGGAAAAGAAATGAAAT +TTGAAGTGTTAACATTGGCAAGCTTAACAACTGAAATTCAAATCAACATTGAGATAGAATCTAGAAAATC +CTACAAAAAAATGCTAAAAGAAATGGGAGAGGTAGCTCCAGAATACAGGCATGACTCTCCTGATTGTGGG +ATGATAATATTATGTATAGCAGCATTAGTAATAACTAAATTAGCAGCAGGGGACAGATCTGGTCTTACAG +CCGTGATTAGGAGAGCTAATAATGTCCTAAAAAATGAAATGAAACGTTACAAAGGCTTACTACCCAAGGA +CATAGCCAACAGCTTCTATGAAGTGTTTGAAAAACATCCCCACTTTATAGATGTTTTTGTTCATTTTGGT +ATAGCACAATCTTCTACCAGAGGTGGCAGTAGAGTTGAAGGGATTTTTGCAGGATTGTTTATGAATGCCT +ATGGTGCAGGGCAAGTGATGTTACGGTGGGGAGTCTTAGCAAAATCAGTTAAAAATATTATGTTAGGACA +TGCTAGTGTGCAAGCAGAAATGGAACAAGTTGTTGAGGTTTATGAATATGCCCAAAAATTGGGTGGTGAA +GCAGGATTCTACCATATATTGAACAACCCAAAAGCATCATTATTATCTTTGACTCAATTTCCTCACTTCT +CCAGTGTAGTATTAGGCAATGCTGCTGGCCTAGGCATAATGGGAGAGTACAGAGGTACACCGAGGAATCA +AGATCTATATGATGCAGCAAAGGCATATGCTGAACAACTCAAAGAAAATGGTGTGATTAACTACAGTGTA +CTAGACTTGACAGCAGAAGAACTAGAGGCTATCAAACATCAGCTTAATCCAAAAGATAATGATGTAGAGC +TTTGAGTTAATAAAAAATGGGGCAAATAAATCATCATGGAAAAGTTTGCTCCTGAATTCCATGGAGAAGA +TGCAAACAACAGGGCTACTAAATTCCTAGAATCAATAAAGGGCAAATTCACATCACCCAAAGATCCCAAG +AAAAAAGATAGTATCATATCTGTCAACTCAATAGATATAGAAGTAACCAAAGAAAGCCCTATAACATCAA +ATTCAACTATTATCAACCCAACAAATGAGACAGATGATACTGCAGGGAACAAGCCCAATTATCAAAGAAA +ACCTCTAGTAAGTTTCAAAGAAGACCCTACACCAAGTGATAATCCCTTTTCTAAACTATACAAAGAAACC +ATAGAAACATTTGATAACAATGAAGAAGAATCCAGCTATTCATACGAAGAAATAAATGATCAGACAAACG +ATAATATAACAGCAAGATTAGATAGGATTGATGAAAAATTAAGTGAAATACTAGGAATGCTTCACACATT +AGTAGTGGCAAGTGCAGGACCTACATCTGCTCGGGATGGTATAAGAGATGCCATGATTGGTTTAAGAGAA +GAAATGATAGAAAAAATCAGAACTGAAGCATTAATGACCAATGACAGATTAGAAGCTATGGCAAGACTCA +GGAATGAGGAAAGTGAAAAGATGGCAAAAGACACATCAGATGAAGTGTCTCTCAATCCAACATCAGAGAA +ATTGAACAACCTATTGGAAGGGAATGATAGTGACAATGATCTATCACTTGAAGATTTCTGATTAGTTACC +ACTCTTCACATCAACACACAATACCAACAGAAGACCAACAAACTAACCAACCCAATCATCCAACCAAACA +TCCATCCGCCAATCAGCCAAACAGCCAACAAAACAACCAGCCAATCCAAAACTAACCACCCGGAAAAAAT +CTATAATATAGTTACAAAAAAAGGAAAGGGTGGGGCAAATATGGAAACATACGTGAACAAGCTTCACGAA +GGCTCCACATACACAGCTGCTGTTCAATACAATGTCTTAGAAAAAGACGATGACCCTGCATCACTTACAA +TATGGGTGCCCATGTTCCAATCATCTATGCCAGCAGATTTACTTATAAAAGAACTAGCTAATGTCAACAT +ACTAGTGAAACAAATATCCACACCCAAGGGACCTTCACTAAGAGTCATGATAAACTCAAGAAGTGCAGTG +CTAGCACAAATGCCCAGCAAATTTACCATATGCGCTAATGTGTCCTTGGATGAAAGAAGCAAACTAGCAT +ATGATGTAACCACACCCTGTGAAATCAAGGCATGTAGTCTAACATGCCTAAAATCAAAAAATATGTTGAC +TACAGTTAAAGATCTCACTATGAAGACACTCAACCCTACACATGATATTATTGCTTTATGTGAATTTGAA +AACATAGTAACATCAAAAAAAGTCATAATACCAACATACCTAAGATCCATCAGTGTCAGAAATAAAGATC +TGAACACACTTGAAAATATAACAACCACTGAATTCAAAAATGCTATCACAAATGCAAAAATCATCCCTTA +CTCAGGATTACTATTAGTCATCACAGTGACTGACAACAAAGGAGCATTCAAATACATAAAGCCACAAAGT +CAATTCATAGTAGATCTTGGAGCTTACCTAGAAAAAGAAAGTATATATTATGTTACCACAAATTGGAAGC +ACACAGCTACACGATTTGCAATCAAACCCATGGAAGATTAACCTTTTTCCTCTACATCAGTGTGTTAATT +CATACAAACTTTCTACCTACATTCTTCACTTCACCATCACAATCACAAACACTCTGTGGTTCAACCAATC +AAACAAAACTTATCTGAAGTCCCAGATCATCCCAAGTCATTGTTTATCAGATCTAGTACTCAAATAAGTT +AATAAAAAATATACACATGGGGCAAATAATCATTGGAGGAAATCCAACTAATCACAATATCTGTTAACAT +AGACAAGTCCACACACCATACAGAATCAACCAATGGAAAATACATCCATAACAATAGAATTCTCAAGCAA +ATTCTGGCCTTACTTTACACTAATACACATGATCACAACAATAATCTCTTTGCTAATCATAATCTCCATC +ATGATTGCAATACTAAACAAACTTTGTGAATATAACGTATTCCATAACAAAACCTTTGAGTTACCAAGAG +CTCGAGTCAACACATAGCATTCATCAATCCAACAGCCCAAAACAGTAACCTTGCATTTAAAAATGAACAA +CCCCTACCTCTTTACAACACCTCATTAACATCCCACCATGCAAACCACTATCCATACTATAAAGTAGTTA +ATTAAAAATAGTCATAACAATGAACTAGGATATCAAGACTAACAATAACATTGGGGCAAATGCAAACATG +TCCAAAAACAAGGACCAACGCACCGCTAAGACATTAGAAAGGACCTGGGACACTCTCAATCATTTATTAT +TCATATCATCGTGCTTATATAAGTTAAATCTTAAATCTGTAGCACAAATCACATTATCCATTCTGGCAAT +GATAATCTCAACTTCACTTATAATTGCAGCCATCATATTCATAGCCTCGGCAAACCACAAAGTCACACCA +ACAACTGCAATCATACAAGATGCAACAAGCCAGATCAAGAACACAACCCCAACATACCTCACCCAGAATC +CTCAGCTTGGAATCAGTCCCTCTAATCCGTCTGAAATTACATCACAAATCACCACCATACTAGCTTCAAC +AACACCAGGAGTCAAGTCAACCCTGCAATCCACAACAGTCAAGACCAAAAACACAACAACAACTCAAACA +CAACCCAGCAAGCCCACCACAAAACAACGCCAAAACAAACCACCAAGCAAACCCAATAATGATTTTCACT +TTGAAGTGTTCAACTTTGTACCCTGCAGCATATGCAGCAACAATCCAACCTGCTGGGCTATCTGCAAAAG +AATACCAAACAAAAAACCAGGAAAGAAAACCACTACCAAGCCCACAAAAAAACCAACCCTCAAGACAACC +AAAAAAGATCCCAAACCTCAAACCACTAAATCAAAGGAAGTACCCACCACCAAGCCCACAGAAGAGCCAA +CCATCAACACCACCAAAACAAACATCATAACTACACTACTCACCTCCAACACCACAGGAAATCCAGAACT +CACAAGTCAAATGGAAACCTTCCACTCAACTTCCTCCGAAGGCAATCCAAGCCCTTCTCAAGTCTCTACA +ACATCCGAGTACCCATCACAACCTTCATCTCCACCCAACACACCACGCCAGTAGTTACTTAAAAACATAT +TATCACAAAAAGCCATGACCAACTTAAACAGAATCAAAATAAACTCTGGGGCAAATAACAATGGAGTTGC +TAATCCTCAAAGCAAATGCAATTACCACAATCCTCACTGCAGTCACATTTTGTTTTGCTTCTGGTCAAAA +CATCACTGAAGAATTTTATCAATCAACATGCAGTGCAGTTAGCAAAGGCTATCTTAGTGCTCTGAGAACT +GGTTGGTATACCAGTGTTATAACTATAGAATTAAGTAATATCAAGGAAAATAAGTGTAATGGAACAGATG +CTAAGGTAAAATTGATAAAACAAGAATTAGATAAATATAAAAATGCTGTAACAGAATTGCAGTTGCTCAT +GCAAAGCACACCACCAACAAACAATCGAGCCAGAAGAGAACTACCAAGGTTTATGAATTATACACTCAAC +AATGCCAAAAAAACCAATGTAACATTAAGCAAGAAAAGGAAAAGAAGATTTCTTGTTTTTTTGTTAGGTG +TTGGATCTGCAATCGCCAGTGGCGTTGCTGTATCTAAGGTCCTGCACCTAGAAGGGGAAGTGAACAAGAT +CAAAAGTGCTCTACTATCCACAAACAAGGCTCTAGTCAGCTTATCAAATGGAGTTAGTGTCTTAACCAGC +AAAGTGTTAGACCTCAAAAACTATATAGATAAACAATTGTTACCTATTGTGAACAAGCAAAGCTGCAGCA +TATCAAATATAGAAACTGTGATAGAGTTCCAACAAAAGAACAACAGACTACTAGAGATTACCAGGGAATT +TAGTGTTAATGCAGGTGTAACTACACCTGTAAGCACTTACATGTTAACTAATAGTGAATTATTGTCATTA +ATCAATGATATGCCTATAACAAATGATCAGAAAAAGTTAATGTCCAACAATGTTCAAATAGTTAGACAGC +AAAGTTACTCTATCATGTCCATAATAAAAGAGGAAGTCTTAGCATATGTAGTACAATTACCACTATATGG +TGTTATAGATACACCCTGTTGGAAACTACACACATCCCCTCTATGTACAACCAACACAAAAGAAGGGTCC +AACATCTGTTTAACAAGAACTGACAGAGGATGGTACTGTGACAATGCAGGATCAGTATCTTTCTTCCCAC +AAGCTGAAACATGTAAAGTTCAATCAAATCGAGTATTTTGTGACACAATGAACAGTTTAACATTACCAAG +TGAAATAAATCTCTGCAATGTTGACATATTCAACCCCAAATATGATTGTAAAATTATGACTTCAAAAACA +GATGTAAGCAGCTCCGTTATCACATCTCTAGGAGCCATTGTGTCATGCTATGGCAAAACTAAATGTACAG +CATCCAATAAAAATCGTGGAATCATAAAGACATTTTCTAACGGGTGCGATTATGTATCAAATAAAGGGAT +GGACACTGTGTCTGTAGGTAACACATTATATTATGTAAATAAGCAAGAAGGTAAAAGTCTCTATGTAAAA +GGTGAACCAATAATAAATTTCTATGACCCATTAGTATTCCCCTCTGATGAATTTGATGCATCAATATCTC +AAGTCAACGAGAAGATTAACCAGAGCCTAGCATTTATTCGTAAATCCGATGAATTATTACATAATGTAAA +TGCTGGTAAATCCACCACAAATATCATGATAACTACTATAATTATAGTGATTATAGTAATATTGTTATCA +TTAATTGCTGTTGGACTGCTCTTATACTGTAAGGCCAGAAGCACACCAGTCACACTAAGCAAAGATCAAC +TGAGTGGTATAAATAATATTGCATTTAGTAACTAAATAAAAATAGCACCTAATCATGTTCTTACAATGGT +TTACTATCTGCTCATAGACAACCCATCTGTCATTGGATTTTCTTAAAATCTGAACTTCATCGAAACTCTC +ATCTATAAACCATCTCACTTACACTATTTAAGTAGATTCCTAGTTTATAGTTATATAAAACACAATTGAA +TGCCAGATTAACTTACCATCTGTAAAAATGAAAACTGGGGCAAATATGTCACGAAGGAATCCTTGCAAAT +TTGAAATTCGAGGTCATTGCTTAAATGGTAAGAGGTGTCATTTTAGTCATAATTATTTTGAATGGCCACC +CCATGCACTGCTTGTAAGACAAAACTTTATGTTAAACAGAATACTTAAGTCTATGGATAAAAGTATAGAT +ACCTTATCAGAAATAAGTGGAGCTGCAGAGTTGGACAGAACAGAAGAGTATGCTCTTGGTGTAGTTGGAG +TGCTAGAGAGTTATATAGGATCAATAAACAATATAACTAAACAATCAGCATGTGTTGCCATGAGCAAACT +CCTCACTGAACTCAATAGTGATGATATCAAAAAGCTGAGGGACAATGAAGAGCTAAATTCACCCAAGATA +AGAGTGTACAATACTGTCATATCATATATTGAAAGCAACAGGAAAAACAATAAACAAACTATCCATCTGT +TAAAAAGATTGCCAGCAGACGTATTGAAGAAAACCATCAAAAACACATTGGATATCCATAAGAGCATAAC +CATCAACAACCCAAAAGAATCAACTGTTAGTGATACAAATGACCATGCCAAAAATAATGATACTACCTGA +CAAATATCCTTGTAGTATAACTTCCATACTAATAACAAGTAGATGTAGAGTTACTATGTATAATCAAAAG +AACACACTATATTTCAATCAAAACAACCCAAATAACCATATGTACTCACCGAATCAAACATTCAATGAAA +TCCATTGGACCTCTCAAGAATTGATTGACACAATTCAAATTTTTCTACAACATCTAGGTATTATTGAGGA +TATATATACAATATATATATTAGTGTCATAACACTCAATTCTAACACTCACCACATCGTTACATTATTAA +TTCAAACAATTCAAGTTGTGGGACAAAATGGATCCCATTATTAATGGAAATTCTGCTAATGTTTATCTAA +CCGATAGTTATTTAAAAGGTGTTATCTCTTTCTCAGAGTGTAATGCTTTAGGAAGTTACATATTCAATGG +TCCTTATCTCAAAAATGATTATACCAACTTAATTAGTAGACAAAATCCATTAATAGAACACATGAATCTA +AAGAAACTAAATATAACACAGTCCTTAATATCTAAGTATCATAAAGGTGAAATAAAATTAGAAGAACCTA +CTTATTTTCAGTCATTACTTATGACATACAAGAGTATGACCTCGTCAGAACAGATTGCTACCACTAATTT +ACTTAAAAAGATAATAAGAAGAGCTATAGAAATAAGTGATGTCAAAGTCTATGCTATATTGAATAAACTA +GGGCTTAAAGAAAAGGACAAGATTAAATCCAACAATGGACAAGATGAAGACAACTCAGTTATTACGACCA +TAATCAAAGATGATATACTTTCAGCTGTTAAAGATAATCAATCTCATCTTAAAGCAGACAAAAATCACTC +TACAAAACAAAAAGACACAATCAAAACAACACTCTTGAAGAAATTGATGTGTTCAATGCAACATCCTCCA +TCATGGTTAATACATTGGTTTAACTTATACACAAAATTAAACAACATATTAACACAGTATCGATCAAATG +AGGTAAAAAACCATGGGTTTACATTGATAGATAATCAAACTCTTAGTGGATTTCAATTTATTTTGAACCA +ATATGGTTGTATAGTTTATCATAAGGAACTCAAAAGAATTACTGTGACAACCTATAATCAATTCTTGACA +TGGAAAGATATTAGCCTTAGTAGATTAAATGTTTGTTTAATTACATGGATTAGTAACTGCTTGAACACAT +TAAATAAAAGCTTAGGCTTAAGATGCGGATTCAATAATGTTATCTTGACACAACTATTCCTTTATGGAGA +TTGTATACTAAAGCTATTTCACAATGAGGGGTTCTACATAATAAAAGAGGTAGAGGGATTTATTATGTCT +CTAATTTTAAATATAACAGAAGAAGATCAATTCAGAAAACGATTTTATAATAGTATGCTCAACAACATCA +CAGATGCTGCTAATAAAGCTCAGAAAAATCTGCTATCAAGAGTATGTCATACATTATTAGATAAGACAGT +GTCCGATAATATAATAAATGGCAGATGGATAATTCTATTAAGTAAGTTCCTTAAATTAATTAAGCTTGCA +GGTGACAATAACCTTAACAATCTGAGTGAACTATATTTTTTGTTCAGAATATTTGGACACCCAATGGTAG +ATGAAAGACAAGCCATGGATGCTGTTAAAATTAATTGCAATGAGACCAAATTTTACTTGTTAAGCAGTCT +GAGTATGTTAAGAGGTGCCTTTATATATAGAATTATAAAAGGGTTTGTAAATAATTACAACAGATGGCCT +ACTTTAAGAAATGCTATTGTTTTACCCTTAAGATGGTTAACTTACTATAAACTAAACACTTATCCTTCTT +TGTTGGAACTTACAGAAAGAGATTTGATTGTGTTATCAGGACTACGTTTCTATCGTGAGTTTCGGTTGCC +TAAAAAAGTGGATCTTGAAATGATTATAAATGATAAAGCTATATCACCTCCTAAAAATTTGATATGGACT +AGTTTCCCTAGAAATTACATGCCATCACACATACAAAACTATATAGAACATGAAAAATTAAAATTTTCCG +AGAGTGATAAATCAAGAAGAGTATTAGAGTATTATTTAAGAGATAACAAATTCAATGAATGTGATTTATA +CAACTGTGTAGTTAATCAAAGTTATCTCAACAACCCTAATCATGTGGTATCATTGACAGGCAAAGAAAGA +GAACTCAGTGTAGGTAGAATGTTTGCAATGCAACCGGGAATGTTCAGACAGGTTCAAATATTGGCAGAGA +AAATGATAGCTGAAAACATTTTACAATTCTTTCCTGAAAGTCTTACAAGATATGGTGATCTAGAACTACA +AAAAATATTAGAATTGAAAGCAGGAATAAGTAACAAATCAAATCGCTACAATGATAATTACAACAATTAC +ATTAGTAAGTGCTCTATCATCACAGATCTCAGCAAATTCAATCAAGCATTTCGATATGAAACGTCATGTA +TTTGTAGTGATGTGCTGGATGAACTGCATGGTGTACAATCTCTATTTTCCTGGTTACATTTAACTATTCC +TCATGTCACAATAATATGCACATATAGGCATGCACCCCCCTATATAGGAGATCATATTGTAGATCTTAAC +AATGTAGATGAACAAAGTGGATTATATAGATATCACATGGGTGGCATCGAAGGGTGGTGTCAAAAACTGT +GGACCATAGAAGCTATATCACTATTGGATCTAATATCTCTCAAAGGGAAATTCTCAATTACTGCTTTAAT +TAATGGTGACAATCAATCAATAGATATAAGCAAACCAATCAGACTCATGGAAGGTCAAACTCATGCTCAA +GCAGATTATTTGCTAGCATTAAATAGCCTTAAATTACTGTATAAAGAGTATGCAGGCATAGGCCACAAAT +TAAAAGGAACTGAGACTTATATATCACGAGATATGCAATTTATGAGTAAAACAATTCAACATAACGGTGT +ATATTACCCAGCTAGTATAAAGAAAGTCCTAAGAGTGGGACCGTGGATAAACACTATACTTGATGATTTC +AAAGTGAGTCTAGAATCTATAGGTAGTTTGACACAAGAATTAGAATATAGAGGTGAAAGTCTATTATGCA +GTTTAATATTTAGAAATGTATGGTTATATAATCAGATTGCTCTACAATTAAAAAATCATGCATTATGTAA +CAATAAACTATATTTGGACATATTAAAGGTTCTGAAACACTTAAAAACCTTTTTTAATCTTGATAATATT +GATACAGCATTAACATTGTATATGAATTTACCCATGTTATTTGGTGGTGGTGATCCCAACTTGTTATATC +GAAGTTTCTATAGAAGAACTCCTGACTTCCTCACAGAGGCTATAGTTCACTCTGTGTTCATACTTAGTTA +TTATACAAACCATGACTTAAAAGATAAACTTCAAGATCTGTCAGATGATAGATTGAATAAGTTCTTAACA +TGCATAATCACGTTTGACAAAAACCCTAATGCTGAATTCGTAACATTGATGAGAGATCCTCAAGCTTTAG +GGTCTGAGAGACAAGCTAAAATTACTAGCGAAATCAATAGACTGGCAGTTACAGAGGTTTTGAGTACAGC +TCCAAACAAAATATTCTCCAAAAGTGCACAACATTATACTACTACAGAGATAGATCTAAATGATATTATG +CAAAATATAGAACCTACATATCCTCATGGGCTAAGAGTTGTTTATGAAAGTTTACCCTTTTATAAAGCAG +AGAAAATAGTAAATCTTATATCAGGTACAAAATCTATAACTAACATACTGGAAAAAACTTCTGCCATAGA +CTTAACAGATATTGATAGAGCCACTGAGATGATGAGGAAAAACATAACTTTGCTTATAAGGATACTTCCA +TTGGATTGTAACAGAGATAAAAGAGAGATATTGAGTATGGAAAACCTAAGTATTACTGAATTAAGCAAAT +ATGTTAGGGAAAGATCTTGGTCTTTATCCAATATAGTTGGTGTTACATCACCCAGTATCATGTATACAAT +GGACATCAAATATACTACAAGCACTATATCTAGTGGCATAATTATAGAGAAATATAATGTTAACAGTTTA +ACACGTGGTGAGAGAGGACCCACTAAACCATGGGTTGGTTCATCTACACAAGAGAAAAAAACAATGCCAG +TTTATAATAGACAAGTCTTAACCAAAAAACAGAGAGATCAAATAGATCTATTAGCAAAATTGGATTGGGT +GTATGCATCTATAGATAACAAGGATGAATTCATGGAAGAACTCAGCATAGGAACCCTTGGGTTAACATAT +GAAAAGGCCAAGAAATTATTTCCACAATATTTAAGTGTCAATTATTTGCATCGCCTTACAGTCAGTAGTA +GACCATGTGAATTCCCTGCATCAATACCAGCTTATAGAACAACAAATTATCACTTTGACACTAGCCCTAT +TAATCGCATATTAACAGAAAAGTATGGTGATGAAGATATTGACATAGTATTCCAAAACTGTATAAGCTTT +GGCCTTAGTTTAATGTCAGTAGTAGAACAATTTACTAATGTATGTCCTAACAGAATTATTCTCATACCTA +AGCTTAATGAGATACATTTGATGAAACCTCCCATATTCACAGGTGATGTTGATATTCACAAGTTAAAACA +AGTGATACAAAAACAGCATATGTTTTTACCAGACAAAATAAGTTTGACTCAATATGTGGAATTATTCTTA +AGTAATAAAACACTCAAATCTGGATCTCATGTTAATTCTAATTTAATATTGGCACATAAAATATCTGACT +ATTTTCATAATACTTACATTTTAAGTACTAATTTAGCTGGACATTGGATTCTGATTATACAACTTATGAA +AGATTCTAAAGGTATTTTTGAAAAAGATTGGGGAGAGGGATATATAACTGATCATATGTTTATTAATTTG +AAAGTTTTCTTCAATGCTTATAAGACCTATCTCTTGTGTTTTCATAAAGGTTATGGCAAAGCAAAGCTGG +AGTGTGATATGAACACTTCAGATCTTCTATGTGTATTGGAATTAATAGACAGTAGTTATTGGAAGTCTAT +GTCTAAGGTATTTTTAGAACAAAAAGTTATCAAATACATTCTTAGCCAAGATGCAAGTTTACATAGAGTA +AAAGGATGTCATAGCTTCAAATTATGGTTTCTTAAACGTCTTAATGTAGCAGAATTCACAGTTTGCCCTT +GGGTTGTTAACATAGATTATCATCCAACACATATGAAAGCAATATTAACTTATATAGATCTTGTTAGAAT +GGGATTGATAAATATAGATAGAATACACATTAAAAATAAACACAAATTCAATGATGAATTTTATACTTCT +AATCTCTTCTACATTAATTATAACTTCTCAGATAATACTCATCTATTAACTAAACATATAAGGATTGCTA +ATTCTGAATTAGAAAATAATTACAACAAATTATATCATCCTACACCAGAAACCCTAGAGAATATACTAGC +CAATCCGATTAAAAGTAATGACAAAAAGACACTGAATGACTATTGTATAGGTAAAAATGTTGACTCAATA +ATGTTACCATTGTTATCTAATAAGAAGCTTATTAAATCGTCTGCAATGATTAGAACCAATTACAGCAAAC +AAGATTTGTATAATTTATTCCCTATGGTTGTGATTGATAGAATTATAGATCATTCAGGCAATACAGCCAA +ATCCAACCAACTTTACACTACTACTTCCCACCAAATATCTTTAGTGCACAATAGCACATCACTTTACTGC +ATGCTTCCTTGGCATCATATTAATAGATTCAATTTTGTATTTAGTTCTACAGGTTGTAAAATTAGTATAG +AGTATATTTTAAAAGATCTTAAAATTAAAGATCCCAATTGTATAGCATTCATAGGTGAAGGAGCAGGGAA +TTTATTATTGCGTACAGTAGTGGAACTTCATCCTGACATAAGATATATTTACAGAAGTCTGAAAGATTGC +AATGATCATAGTTTACCTATTGAGTTTTTAAGGCTGTACAATGGACATATCAACATTGATTATGGTGAAA +ATTTGACCATTCCTGCTACAGATGCAACCAACAACATTCATTGGTCTTATTTACATATAAAGTTTGCTGA +ACCTATCAGTCTTTTTGTCTGTGATGCCGAATTGTCTGTAACAGTCAACTGGAGTAAAATTATAATAGAA +TGGAGCAAGCATGTAAGAAAGTGCAAGTACTGTTCCTCAGTTAATAAATGTATGTTAATAGTAAAATATC +ATGCTCAAGATGATATTGATTTCAAATTAGACAATATAACTATATTAAAAACTTATGTATGCTTAGGCAG +TAAGTTAAAGGGATCGGAGGTTTACTTAGTCCTTACAATAGGTCCTGCGAATATATTCCCAGTATTTAAT +GTAGTACAAAATGCTAAATTGATACTATCAAGAACCAAAAATTTCATCATGCCTAAGAAAGCTGATAAAG +AGTCTATTGATGCAAATATTAAAAGTTTGATACCCTTTCTTTGTTACCCTATAACAAAAAAAGGAATTAA +TACTGCATTGTCAAAACTAAAGAGTGTTGTTAGTGGAGATATACTATCATATTCTATAGCTGGACGTAAT +GAAGTTTTCAGCAATAAACTTATAAATCATAAGCATATGAACATCTTAAAATGGTTCAATCATGTTTTAA +ATTTCAGATCAACAGAACTAAACTATAACCATTTATATATGGTAGAATCTACATATCCTTACCTAAGTGA +ATTGTTAAACAGCTTGACAACCAATGAACTTAAAAAACTGATTAAAATCACAGGTAGTCTGTTATACAAC +TTTCATAATGAATAATGAATAAAGATCTTATAATAAAAATTCCCATAGCTATACACTAACACTGTATTCA +ATTATAGTTATTAAAAATTAAAAATCATATAATTTTTTAAATAACTTTTAGTGAACTAATCCTAAAGTTA +TCATTTTAATCTTGGAGGAATAAATTTAAACCCTAATCTAATTGGTTTATATGTGTATTAACTAAATTAC +GAGATATTAGTTTTTGACACTTTTTTTCTCGT + +>NC_001781.1 Human orthopneumovirus Subgroup B, complete genome +ACGCGAAAAAATGCGTACTACAAACTTGCACATTCGGAAAAAATGGGGCAAATAAGAATTTGATAAGTGC +TATTTAAGTCTAACCTTTTCAATCAGAAATGGGGTGCAATTCACTGAGCATGATAAAGGTTAGATTACAA +AATTTATTTGACAATGACGAAGTAGCATTGTTAAAAATAACATGTTATACTGACAAATTAATTCTTCTGA +CCAATGCATTAGCCAAAGCAGCAATACATACAATTAAATTAAACGGTATAGTTTTTATACATGTTATAAC +AAGCAGTGAAGTGTGCCCTGATAACAACATTGTAGTAAAATCTAACTTTACAACAATGCCAATATTACAA +AACGGAGGATACATATGGGAATTGATTGAGTTGACACACTGCTCTCAATTAAACGGTCTAATGGATGATA +ATTGTGAAATCAAATTTTCTAAAAGACTAAGTGACTCAGTAATGACTAATTATATGAATCAAATATCTGA +TTTACTTGGGCTTGATCTCAATTCATGAATTATGTTTAGTCTAACTCAATAGACATGTGTTTATTACCAT +TTTAGTTAATATAAAAACTCATCAAAGGGAAATGGGGCAAATAAACTCACCTAATCAATCAAACTATGAG +CACTACAAATGACAACACTACTATGCAAAGATTAATGATCACGGACATGAGACCCCTGTCGATGGATTCA +ATAATAACATCTCTCACCAAAGAAATCATCACACACAAATTCATATACTTGATAAACAATGAATGTATTG +TAAGAAAACTTGATGAAAGACAAGCTACATTTACATTCTTAGTCAATTATGAGATGAAGCTACTGCACAA +AGTAGGGAGTACCAAATACAAGAAATACACTGAATATAATACAAAATATGGCACTTTCCCCATGCCTATA +TTTATCAATCATGGCGGGTTTCTAGAATGTATTGGCATTAAGCCTACAAAACACACTCCTATAATATACA +AATATGACCTCAACCCGTAAATTCCAACAAAAAAAACCAACCCAACCAAACCAAGCTATTCCTCAAACAA +CAATGCTCAATAGTTAAGAAGGAGCTAATCCGTTTTAGTAATTAAAAATAAAAGTAAAGCCAATAACATA +AATTGGGGCAAATACAAAGATGGCTCTTAGCAAAGTCAAGTTAAATGATACATTAAATAAGGATCAGCTG +CTGTCATCCAGCAAATACACTATTCAACGTAGTACAGGAGATAATATTGACACTCCCAATTATGATGTGC +AAAAACACCTAAACAAACTATGTGGTATGCTATTAATCACTGAAGATGCAAATCATAAATTCACAGGATT +AATAGGTATGTTATATGCTATGTCCAGGTTAGGAAGGGAAGACACTATAAAGATACTTAAAGATGCTGGA +TATCATGTTAAAGCTAATGGAGTAGATATAACAACATATCGTCAAGATATAAATGGAAAGGAAATGAAAT +TCGAAGTATTAACATTATCAAGCTTGACATCAGAAATACAAGTCAATATTGAGATAGAATCTAGAAAATC +CTACAAAAAAATGCTAAAAGAGATGGGAGAAGTGGCTCCAGAATATAGGCATGATTCTCCAGACTGTGGG +ATGATAATACTGTGTATAGCAGCACTTGTAATAACCAAATTAGCAGCAGGAGACAGATCAGGTCTTACAG +CAGTAATTAGGAGGGCAAACAATGTCTTAAAAAATGAAATAAAACGCTACAAGGGTCTCATACCAAAGGA +TATAGCTAACAGTTTTTATGAAGTGTTTGAAAAACACCCTCATCTTATAGATGTTTTTGTGCACTTTGGC +ATTGCACAATCATCAACAAGAGGGGGTAGTAGAGTTGAAGGAATCTTTGCAGGATTGTTTATGAATGCCT +ATGGTTCAGGGCAAGTAATGCTAAGATGGGGAGTTTTAGCCAAATCTGTAAAAAATATCATGCTAGGTCA +TGCTAGTGTCCAGGCAGAAATGGAGCAAGTTGTGGAAGTCTATGAGTATGCACAGAAGTTGGGAGGAGAA +GCTGGATTCTACCATATATTGAACAATCCAAAAGCATCATTGCTGTCATTAACTCAATTTCCTAACTTCT +CAAGTGTGGTCCTAGGCAATGCAGCAGGTCTAGGCATAATGGGAGAGTATAGAGGTACGCCAAGAAACCA +GGATCTTTATGATGCAGCCAAAGCATATGCAGAGCAACTCAAAGAAAATGGAGTAATAAACTACAGTGTA +TTAGACTTAACAGCAGAAGAATTGGAAGCCATAAAGAATCAACTCAACCCTAAAGAAGATGATGTAGAGC +TTTAAGTTAACAAAAAATACGGGGCAAATAAGTCAACATGGAGAAGTTTGCACCTGAATTTCATGGAGAA +GATGCAAATAACAAAGCTACCAAATTCCTAGAATCAATAAAGGGCAAGTTCGCATCATCCAAAGATCCTA +AGAAGAAAGATAGCATAATATCTGTTAACTCAATAGATATAGAAGTAACCAAAGAGAGCCCGATAACATC +TGGCACCAACATCATCAATCCAACAAGTGAAGCCGACAGTACCCCAGAAACCAAAGCCAACTACCCAAGA +AAACCCCTAGTAAGCTTCAAAGAAGATCTCACCCCAAGTGACAACCCTTTTTCTAAGTTGTACAAAGAAA +CAATAGAAACATTTGATAACAATGAAGAAGAATCTAGCTACTCATATGAAGAGATAAATGATCAAACAAA +TGACAACATTACAGCAAGACTAGATAGAATTGATGAAAAATTAAGTGAAATATTAGGAATGCTCCATACA +TTAGTAGTTGCAAGTGCAGGACCCACTTCAGCTCGCGATGGAATAAGAGATGCTATGGTTGGTCTGAGAG +AAGAAATGATAGAAAAAATAAGAGCGGAAGCATTAATGACCAATGATAGGTTAGAGGCTATGGCAAGACT +TAGGAATGAGGAAAGCGAAAAAATGGCAAAAGACACCTCAGATGAAGTGCCTCTTAATCCAACTTCCAAA +AAATTGAGTGACTTGTTGGAAGACAACGATAGTGACAATGATCTGTCACTTGATGATTTTTGATCAGTGA +TCAACTCACTCAGCAATCAACAACATCAATAAAACAGACATCAATCCATTGAATCAACTGCCAGACCGAA +CAAACAAATGTCCGTCAGCGGAACCACCAACCAATCAATCAACCAACTGATCCATCAGCAACCTGACGAA +ATTAACAATATAGTAACAAAAAAAGAACAAGATGGGGCAAATATGGAAACATACGTGAACAAGCTTCACG +AAGGCTCCACATACACAGCAGCTGTTCAGTACAATGTTCTAGAAAAAGATGATGATCCTGCATCACTAAC +AATATGGGTGCCTATGTTCCAGTCATCTGTACCAGCAGACTTGCTCATAAAAGAACTTGCAAGCATCAAC +ATACTAGTGAAGCAGATCTCTACGCCCAAAGGACCTTCACTACGAGTCACGATTAACTCAAGAAGTGCTG +TGCTGGCTCAAATGCCTAGTAATTTCATCATAAGCGCAAATGTATCATTAGATGAAAGAAGCAAATTAGC +ATATGATGTAACTACACCTTGTGAAATCAAAGCATGCAGTCTAACATGCTTAAAAGTGAAAAGTATGTTA +ACTACAGTCAAAGATCTTACCATGAAGACATTCAACCCCACTCATGAGATCATTGCTCTATGTGAATTTG +AAAATATTATGACATCAAAAAGAGTAATAATACCAACCTATCTAAGACCAATTAGTGTCAAAAACAAGGA +TCTGAACTCACTAGAAAACATAGCAACCACCGAATTCAAAAATGCTATCACCAATGCGAAAATTATTCCC +TATGCTGGATTAGTATTAGTTATCACAGTTACTGACAATAAAGGAGCATTCAAATATATCAAGCCACAGA +GTCAATTTATAGTAGATCTTGGTGCCTACCTAGAAAAAGAGAGCATATATTATGTGACTACTAATTGGAA +GCATACAGCTACACGTTTTTCAATCAAACCACTAGAGGATTAAATTTAATTATCAACACTGAATGACAGG +TCCACATATATCCTCAAACTACACACTATATCCAAACATCATGAACATCTACACTACACACTTCATCACA +CAAACCAATCCCACTCAAAATCCAAAATCACTACCAGCCACTATCTGCTAGACCTAGAGTGCGAATAGGT +AAATAAAACCAAAATATGGGGTAAATAGACATTAGTTAGAGTTCAATCAATCTCAACAACCATTTATACC +GCCAATTCAATACATATACTATAAATCTTAAAATGGGAAATACATCCATCACAATAGAATTCACAAGCAA +ATTTTGGCCCTATTTTACACTAATACATATGATCTTAACTCTAATCTCTTTACTAATTATAATCACTATT +ATGATTGCAATACTAAATAAGCTAAGTGAACATAAAACATTCTGTAACAATACTCTTGAACTAGGACAGA +TGCATCAAATCAACACATAGTGCTCTACCATCATGCTGTGTCAAATTATAATCCTGTATATATAAACAAA +CAAATCCAATCTTCTCACAGAGTCATGGTGTCGCAAAACCACGCCAACTATCATGGTAGCATAGAGTAGT +TATTTAAAAATTAACATAATGATGAATTATTAGTATGGGATCAAAAACAACATTGGGGCAAATGCAACCA +TGTCCAAACACAAGAATCAACGCACTGCCAGGACTCTAGAAAAGACCTGGGATACTCTCAATCATCTAAT +TGTAATATCCTCTTGTTTATACAGATTAAATTTAAAATCTATAGCACAAATAGCACTATCAGTTCTGGCA +ATGATAATCTCAACCTCTCTCATAATTGCAGCCATAATATTCATCATCTCTGCCAATCACAAAGTTACAC +TAACAACGGTCACAGTTCAAACAATAAAAAACCACACTGAAAAAAACATCACCACCTACCTTACTCAAGT +CCCACCAGAAAGGGTTAGCTCATCCAAACAACCTACAACCACATCACCAATCCACACAAATTCAGCCACA +ACATCACCCAACACAAAGTCAGAAACACACCACACAACAGCACAAACCAAAGGCAGAACCACCACCTCAA +CACAGACCAACAAGCCGAGCACAAAACCACGCCTAAAAAATCCACCAAAAAAACCAAAAGATGATTACCA +TTTTGAAGTGTTCAACTTCGTTCCCTGTAGTATATGTGGCAACAATCAACTTTGCAAATCCATCTGTAAA +ACAATACCAAGCAACAAACCAAAGAAGAAACCAACCATCAAACCCACAAACAAACCAACCACCAAAACCA +CAAACAAAAGAGACCCAAAAACACCAGCCAAAACGACGAAAAAAGAAACTACCACCAACCCAACAAAAAA +ACCAACCCTCACGACCACAGAAAGAGACACCAGCACCTCACAATCCACTGTGCTCGACACAACCACATTA +GAACACACAATCCAACAGCAATCCCTCCACTCAACCACCCCCGAAAACACACCCAACTCCACACAAACAC +CCACAGCATCCGAGCCCTCTACATCAAATTCCACCCAAAATACCCAATCACATGCTTAGTTATTCAAAAA +CTACATCTTAGCAGAAAACCGTGACCTATCAAGCAAGAACGAAATTAAACCTGGGGCAAATAACCATGGA +GCTGCTGATCCACAGGTTAAGTGCAATCTTCCTAACTCTTGCTATTAATGCATTGTACCTCACCTCAAGT +CAGAACATAACTGAGGAGTTTTACCAATCGACATGTAGTGCAGTTAGCAGAGGTTATTTTAGTGCTTTAA +GAACAGGTTGGTATACCAGTGTCATAACAATAGAATTAAGTAATATAAAAGAAACCAAATGCAATGGAAC +TGACACTAAAGTAAAACTTATAAAACAAGAATTAGATAAGTATAAGAATGCAGTGACAGAATTACAGCTA +CTTATGCAAAACACACCAGCTGCCAACAACCGGGCCAGAAGAGAAGCACCACAGTATATGAACTATACAA +TCAATACCACTAAAAACCTAAATGTATCAATAAGCAAGAAGAGGAAACGAAGATTTCTGGGCTTCTTGTT +AGGTGTAGGATCTGCAATAGCAAGTGGTATAGCTGTATCCAAAGTTCTACACCTTGAAGGAGAAGTGAAC +AAGATCAAAAATGCTTTGTTATCTACAAACAAAGCTGTAGTCAGTCTATCAAATGGGGTCAGTGTTTTAA +CCAGCAAAGTGTTAGATCTCAAGAATTACATAAATAACCAATTATTACCCATAGTAAATCAACAGAGCTG +TCGCATCTCCAACATTGAAACAGTTATAGAATTCCAGCAGAAGAACAGCAGATTGTTGGAAATCAACAGA +GAATTCAGTGTCAATGCAGGTGTAACAACACCTTTAAGCACTTACATGTTAACAAACAGTGAGTTACTAT +CATTGATCAATGATATGCCTATAACAAATGATCAGAAAAAATTAATGTCAAGCAATGTTCAGATAGTAAG +GCAACAAAGTTATTCTATCATGTCTATAATAAAGGAAGAAGTCCTTGCATATGTTGTACAGCTACCTATC +TATGGTGTAATAGATACACCTTGCTGGAAATTACACACATCACCTCTATGCACCACCAACATCAAAGAAG +GATCAAATATTTGTTTAACAAGGACTGATAGAGGATGGTATTGTGATAATGCAGGATCAGTATCCTTCTT +TCCACAGGCTGACACTTGTAAAGTACAGTCCAATCGAGTATTTTGTGACACTATGAACAGTTTGACATTA +CCAAGTGAAGTCAGCCTTTGTAACACTGACATATTCAATTCCAAGTATGACTGCAAAATTATGACATCAA +AAACAGACATAAGCAGCTCAGTAATTACTTCTCTTGGAGCTATAGTGTCATGCTATGGTAAAACTAAATG +CACTGCATCCAACAAAAATCGTGGGATTATAAAGACATTTTCTAATGGTTGTGACTATGTGTCAAACAAA +GGAGTAGATACTGTGTCAGTGGGCAACACTTTATACTATGTAAACAAGCTGGAAGGCAAGAACCTTTATG +TAAAAGGGGAACCTATAATAAATTACTATGACCCTCTAGTGTTTCCTTCTGATGAGTTTGATGCATCAAT +ATCTCAAGTCAATGAAAAAATCAATCAAAGTTTAGCTTTTATTCGTAGATCTGATGAATTACTACATAAT +GTAAATACTGGCAAATCTACTACAAATATTATGATAACTACAATTATTATAGTAATCATTGTAGTATTGT +TATCATTAATAGCTATTGGTTTGCTGTTGTATTGCAAAGCCAAAAACACACCAGTTACACTAAGCAAAGA +CCAACTAAGTGGAATCAATAATATTGCATTCAGCAAATAGACAAAAAACCACCTGATCATGTTTCAACAA +CAGTCTGCTGATCACCAATCCCAAATCAACCCATAACAAACACTTCAACATCACAGTACAGGCTGAATCA +TTTCTTCACATCATGCTACCCACACAACTAAGCTAGATCCTTAACTCATAGTTACATAAAAACCTCAAGT +ATCACAATCAAACACTAAATCAACACATCATTCACAAAATTAACAGCTGGGGCAAATATGTCGCGAAGAA +ATCCTTGTAAATTTGAGATTAGAGGTCATTGCTTGAATGGTAGAAGATGTCACTACAGTCATAATTACTT +TGAATGGCCTCCTCATGCCTTACTAGTGAGGCAAAACTTCATGTTAAACAAGATACTCAAGTCAATGGAC +AAAAGCATAGACACTTTGTCTGAAATAAGTGGAGCTGCTGAACTGGACAGAACAGAAGAATATGCTCTTG +GTATAGTTGGAGTGCTAGAGAGTTACATAGGATCTATAAACAACATAACAAAACAATCAGCATGTGTTGC +TATGAGTAAACTTCTTATTGAGATCAATAGTGATGACATTAAAAAGCTGAGAGATAATGAAGAACCCAAT +TCACCTAAGATAAGAGTGTACAATACTGTTATATCATACATTGAGAGCAATAGAAAAAACAACAAGCAAA +CAATCCATCTGCTCAAAAGACTACCAGCAGACGTGCTGAAGAAGACAATAAAAAACACATTAGATATCCA +CAAAAGCATAATCATAAGCAACCCAAAAGAGTCAACCGTGAATGATCAAAATGACCAAACCAAAAATAAT +GATATTACCGGATAAATATCCTTGTAGTATATCATCCATATTGATTTCAAGTGAAAGCATGATTGCTACA +TTCAATCATAAAAACATATTACAATTTAACCATAACCATTTGGATAACCACCAGCGTTTATTAAATAATA +TATTTGATGAAATTCATTGGACACCTAAAAACTTATTAGATGCCACTCAACAATTTCTCCAACATCTTAA +CATCCCTGAAGATATATATACAATATATATATTAGTGTCATAATGCTTGGCCATAACGATTCTATATCAT +CCAACCATAAAACTATCTTAATAAGGTTATGGGACAAAATGGATCCCATTATTAATGGAAACTCTGCTAA +TGTGTATCTAACTGATAGTTATTTAAAAGGTGTTATCTCTTTTTCAGAATGTAATGCTTTAGGGAGTTAC +CTTTTTAACGGCCCTTATCTCAAAAATGATTACACCAACTTAATTAGTAGACAAAGTCCACTACTAGAGC +ATATGAATCTTAAAAAACTAACTATAACACAGTCATTAATATCTAGATATCATAAAGGTGAACTGAAATT +AGAAGAACCAACTTATTTCCAGTCATTACTTATGACATATAAAAGCATGTCCTCGTCTGAACAAATTGCT +ACAACTAACTTACTTAAAAAAATAATACGAAGAGCTATAGAAATAAGTGATGTAAAGGTGTACGCCATCT +TGAATAAACTAGGACTAAAGGAAAAGGACAGAGTTAAGCCCAACAATAATTCAGGTGATGAAAACTCAGT +ACTTACAACTATAATTAAAGATGATATACTTTCGGCTGTGGAAAGCAATCAATCATATACAAATTCAGAC +AAAAATCACTCAGTAAATCAAAATATCACTATCAAAACAACACTCTTGAAAAAATTGATGTGTTCAATGC +AACATCCTCCATCATGGTTAATACACTGGTTCAATTTATATACAAAATTAAATAACATATTAACACAATA +TCGATCAAATGAGGTAAAAAGTCATGGGTTTATATTAATAGATAATCAAACTTTAAGTGGTTTTCAGTTT +ATTTTAAATCAATATGGTTGTATCGTTTATCATAAAGGACTCAAAAAAATCACAACTACTACTTACAATC +AATTTTTAACATGGAAAGACATCAGCCTTAGCAGATTAAATGTTTGCTTAATTACTTGGATAAGTAATTG +TTTGAATACATTAAATAAAAGCTTAGGGCTGAGATGTGGATTCAATAATGTTGTGTTATCACAATTATTT +CTTTATGGAGATTGTATACTGAAATTATTTCATAATGAAGGCTTCTACATAATAAAAGAAGTAGAGGGAT +TTATTATGTCTTTAATTCTAAACATAACAGAAGAAGATCAATTTAGGAAACGATTTTATAATAGCATGCT +AAATAACATCACAGATGCAGCTATTAAGGCTCAAAAGAACCTACTATCAAGGGTATGTCACACTTTATTA +GACAAGACAGTGTCTGATAATATCATAAATGGTAAATGGATAATCCTATTAAGTAAATTTCTTAAATTGA +TTAAGCTTGCAGGTGATAATAATCTCAATAATTTGAGTGAGCTATATTTTCTCTTCAGAATCTTTGGACA +TCCAATGGTTGATGAAAGACAAGCAATGGATGCTGTAAGAATTAACTGTAATGAAACTAAGTTCTACTTA +TTAAGTAGTCTAAGTACGTTAAGAGGTGCTTTCATTTATAGAATCATAAAAGGGTTTGTAAATACCTACA +ACAGATGGCCCACTTTAAGGAATGCTATTGTCCTACCTCTAAGATGGTTAAACTATTATAAACTTAATAC +TTATCCATCTCTACTTGAAATCACAGAAAATGATTTGATTATTTTATCAGGATTGCGGTTCTATCGTGAA +TTTCATCTGCCTAAAAAAGTGGATCTTGAAATGATAATAAATGACAAAGCCATTTCACCTCCAAAAGATC +TAATATGGACTAGTTTTCCTAGAAATTACATGCCATCACATATACAAAATTATATAGAACATGAAAAGTT +GAAGTTCTCTGAAAGCGACAGATCAAGAAGAGTACTAGAGTATTACTTGAGAGATAATAAATTCAATGAA +TGCGATCTATACAATTGTGTAGTCAATCAAAGCTATCTCAACAACTCTAATCACGTGGTATCACTAACTG +GTAAAGAAAGAGAGCTCAGTGTAGGTAGAATGTTTGCTATGCAACCAGGTATGTTTAGGCAAATCCAAAT +CTTAGCAGAGAAAATGATAGCCGAAAATATTTTACAATTCTTCCCTGAGAGTTTGACAAGATATGGTGAT +CTAGAGCTTCAAAAGATATTAGAATTAAAAGCAGGAATAAGCAACAAGTCAAATCGTTATAATGATAACT +ACAACAATTATATCAGTAAATGTTCTATCATTACAGATCTTAGCAAATTCAATCAAGCATTTAGATATGA +AACATCATGTATCTGCAGTGATGTATTAGATGAACTGCATGGAGTACAATCTCTGTTCTCTTGGTTGCAT +TTAACAATACCTCTTGTCACAATAATATGTACATATAGACATGCACCTCCTTTCATAAAGGATCATGTTG +TTAATCTTAATGAAGTTGATGAACAAAGTGGATTATACAGATATCATATGGGTGGTATTGAGGGCTGGTG +TCAAAAACTGTGGACCATTGAAGCTATATCATTATTAGATCTAATATCTCTCAAAGGGAAATTCTCTATC +ACAGCTCTGATAAATGGTGATAATCAGTCAATTGATATAAGTAAACCAGTTAGACTTATAGAGGGTCAGA +CCCATGCTCAAGCAGATTATTTGTTAGCATTAAATAGCCTTAAATTGCTATATAAAGAGTATGCAGGTAT +AGGCCATAAGCTTAAGGGAACAGAGACCTATATATCCCGAGATATGCAGTTCATGAGCAAAACAATCCAG +CACAATGGAGTGTACTATCCAGCCAGTATCAAAAAAGTCCTGAGAGTAGGTCCATGGATAAATACAATAC +TTGATGATTTTAAAGTTAGTTTAGAATCTATAGGTAGCTTAACACAGGAGTTAGAATACAGAGGGGAAAG +CTTATTATGCAGTTTAATATTTAGGAACATTTGGTTATACAATCAAATTGCTTTGCAACTCCGAAATCAT +GCATTATGTAACAATAAGCTATATTTAGATATATTGAAAGTATTAAAACACTTAAAAACTTTTTTTAATC +TTGATAGTATCGATATGGCGTTATCATTGTATATGAATTTGCCTATGCTGTTTGGTGGTGGTGATCCTAA +TTTGTTATATCGAAGCTTTTATAGGAGAACTCCAGACTTCCTTACAGAAGCTATAGTACATTCAGTGTTT +GTGTTGAGCTATTATACTGGTCACGATTTACAAGATAAGCTCCAGGATCTTCCAGATGATAGACTGAACA +AATTCTTGACATGTGTCATCACATTCGATAAAAATCCCAATGCCGAGTTTGTAACATTGATGAGGGATCC +ACAGGCGTTAGGGTCTGAAAGGCAAGCTAAAATTACTAGTGAGATTAATAGATTAGCAGTAACAGAAGTC +TTAAGTATAGCTCCAAACAAAATATTTTCTAAAAGTGCACAACATTATACTACCACTGAGATTGATCTAA +ATGACATTATGCAAAATATAGAACCAACTTACCCTCATGGATTAAGAGTTGTTTATGAAAGTCTACCTTT +TTATAAAGCAGAAAAAATAGTTAATCTTATATCAGGAACAAAATCCATAACTAATATACTTGAAAAAACA +TCAGCAATAGATACAACTGATATTAATAGGGCTACTGATATGATGAGGAAAAATATAACTTTACTTATAA +GGATACTTCCACTAGATTGTAACAAAGACAAAAGAGAGTTATTAAGTTTAGAAAATCTTAGTATAACTGA +ATTAAGCAAGTATGTAAGAGAAAGATCTTGGTCATTATCCAATATAGTAGGAGTAACATCGCCAAGTATT +ATGTTCACAATGGACATTAAATATACAACTAGCACTATAGCCAGTGGTATAATTATAGAAAAATATAATG +TTAATAGTTTAACTCGTGGTGAAAGAGGACCTACTAAGCCATGGGTAGGTTCATCTACGCAGGAGAAAAA +AACAATGCCAGTGTACAATAGACAAGTTTTAACCAAAAAGCAAAGAGACCAAATAGATTTATTAGCAAAA +TTAGACTGGGTATATGCATCCATAGACAACAAAGATGAATTCATGGAAGAACTGAGTACTGGAACACTTG +GACTGTCATATGAAAAAGCCAAAAAGTTGTTTCCACAATATCTAAGTGTCAATTATTTACACCGTTTAAC +AGTCAGTAGTAGACCATGTGAATTCCCTGCATCAATACCAGCTTATAGAACAACAAATTATCATTTCGAT +ACTAGTCCTATCAATCATGTATTAACAGAAAAGTATGGAGATGAAGATATCGACATTGTGTTTCAAAATT +GCATAAGTTTTGGTCTTAGCCTGATGTCGGTTGTGGAACAATTCACAAACATATGTCCTAATAGAATTAT +TCTCATACCGAAGCTGAATGAGATACATTTGATGAAACCTCCTATATTTACAGGAGATGTTGATATCATC +AAGTTGAAGCAAGTGATACAAAAACAGCATATGTTCCTACCAGATAAAATAAGTTTAACCCAATATGTAG +AATTATTCCTAAGTAACAAAGCACTTAAATCTGGATCTAACATCAATTCTAATTTAATATTAGTACATAA +AATGTCTGATTATTTTCATAATGCTTATATTTTAAGTACTAATTTAGCTGGACATTGGATTCTAATTATT +CAACTTATGAAAGATTCAAAAGGTATTTTTGAAAAAGATTGGGGAGAGGGGTACATAACTGATCATATGT +TCATTAATTTGAATGTTTTCTTTAATGCTTATAAGACTTATTTGCTATGTTTTCATAAAGGTTATGGTAA +AGCAAAATTAGAATGTGATATGAACACTTCAGATCTTCTTTGTGTTTTGGAGTTAATAGACAGTAGCTAC +TGGAAATCTATGTCTAAAGTTTTCCTAGAACAAAAAGTCATAAAATACATAGTCAATCAAGACACAAGTT +TGCATAGAATAAAAGGCTGTCACAGTTTTAAGTTGTGGTTTTTAAAACGCCTTAATAATGCTAAATTTAC +CGTATGCCCTTGGGTTGTTAACATAGATTATCACCCAACACATATGAAAGCTATATTATCTTACATAGAT +TTAGTTAGAATGGGGTTAATAAATGTAGATAAATTAACCATTAAAAATAAAAACAAATTCAATGATGAAT +TTTACACATCAAATCTCTTTTACATTAGTTATAACTTTTCAGACAACACTCATTTGCTAACAAAACAAAT +AAGAATTGCTAATTCAGAATTAGAAGATAATTATAACAAACTATATCACCCAACCCCAGAAACTTTAGAA +AATATATCATTAATTCCTGTTAAAAGTAATAATAGTAACAAACCTAAATTTTGTATAAGTGGAAATACCG +AATCTATAATGATGTCAACATTCTCTAATAAAATGCATATTAAATCTTCCACTGTTACCACAAGATTCAA +TTATAGCAAACAAGACTTGTACAATTTATTTCCAAATGTTGTGATAGACAGGATTATAGATCATTCAGGT +AATACAGCAAAATCTAACCAACTTTACATCACCACTTCACATCAGACATCTTTAGTAAGGAATAGTGCAT +CACTTTATTGCATGCTTCCTTGGCATCATGTCAATAGATTTAACTTTGTATTTAGTTCCACAGGATGCAA +GATCAGTATAGAGTATATTTTAAAAGATCTTAAGATTAAGGACCCCAGTTGTATAGCATTCATAGGTGAA +GGAGCTGGTAACTTATTATTACGTACGGTAGTAGAACTTCATCCAGACATAAGATACATTTACAGAAGTT +TAAAAGATTGCAATGATCATAGTTTACCTATTGAATTTCTAAGATTATACAACGGGCATATAAACATAGA +TTATGGTGAGAATTTAACCATTCCTGCTACAGATGCAACTAATAACATTCATTGGTCTTATTTACATATA +AAATTTGCAGAACCTATTAGCATCTTTGTCTGCGATGCTGAATTACCTGTTACAGCCAATTGGAGTAAAA +TTATAATTGAATGGAGTAAGCATGTAAGAAAGTGCAAGTACTGTTCTTCTGTAAATAGATGCATTTTAAT +CGCAAAATATCATGCTCAAGATGATATTGATTTCAAATTAGATAACATTACTATATTAAAAACTTACGTG +TGCCTAGGTAGCAAGTTAAAAGGATCTGAAGTTTACTTAGTCCTTACAATAGGCCCTGCAAATATACTTC +CTGTTTTTGATGTTGTGCAAAATGCTAAATTGATTTTTTCAAGAACTAAAAATTTCATTATGCCTAAAAA +AACTGACAAGGAATCTATCGATGCAAATATTAAAAGCTTAATACCTTTCCTTTGTTACCCTATAACAAAA +AAAGGAATTAAGACTTCATTGTCAAAATTGAAGAGTGTAGTTAATGGGGATATATTATCATATTCTATAG +CTGGACGTAATGAAGTATTCAGCAACAAGCTTATAAACCACAAGCATATGAATATCCTAAAATGGCTAGA +TCATGTTTTAAATTTTAGATCAGCTGAACTTAATTACAATCATTTATACATGATAGAGTCCACATATCCT +TACTTAAGTGAATTGTTAAATAGTTTAACAACCAATGAGCTCAAGAAACTGATTAAAATAACAGGTAGTG +TACTATACAACCTTCCCAACGAACAGTAACTTAAAATATCATTAACAAGTTTGGTCAAATTTAGATGCTA +ACACATCATTATATTATAGTTATTAAAAAATATGCAAACTTTTCAATAATTTAGCTTACTGATTCCAAAA +TTATCATTTTATTTTTAAGGGGTTGAATAAAAGTCTAAAACTAACAATGATACATGTGCATTTACAACAC +AACGAGACATTAGTTTTTGACACTTTTTTTCTCGT \ No newline at end of file diff --git a/primerschemes/rsva-rsvb/1000/v1.0.0/work/NC_001781.1.fasta b/primerschemes/rsva-rsvb/1000/v1.0.0/work/NC_001781.1.fasta new file mode 100644 index 0000000..09d4dba --- /dev/null +++ b/primerschemes/rsva-rsvb/1000/v1.0.0/work/NC_001781.1.fasta @@ -0,0 +1,220 @@ +>NC_001781.1 Human orthopneumovirus Subgroup B, complete genome +ACGCGAAAAAATGCGTACTACAAACTTGCACATTCGGAAAAAATGGGGCAAATAAGAATTTGATAAGTGC +TATTTAAGTCTAACCTTTTCAATCAGAAATGGGGTGCAATTCACTGAGCATGATAAAGGTTAGATTACAA +AATTTATTTGACAATGACGAAGTAGCATTGTTAAAAATAACATGTTATACTGACAAATTAATTCTTCTGA +CCAATGCATTAGCCAAAGCAGCAATACATACAATTAAATTAAACGGTATAGTTTTTATACATGTTATAAC +AAGCAGTGAAGTGTGCCCTGATAACAACATTGTAGTAAAATCTAACTTTACAACAATGCCAATATTACAA +AACGGAGGATACATATGGGAATTGATTGAGTTGACACACTGCTCTCAATTAAACGGTCTAATGGATGATA +ATTGTGAAATCAAATTTTCTAAAAGACTAAGTGACTCAGTAATGACTAATTATATGAATCAAATATCTGA +TTTACTTGGGCTTGATCTCAATTCATGAATTATGTTTAGTCTAACTCAATAGACATGTGTTTATTACCAT +TTTAGTTAATATAAAAACTCATCAAAGGGAAATGGGGCAAATAAACTCACCTAATCAATCAAACTATGAG +CACTACAAATGACAACACTACTATGCAAAGATTAATGATCACGGACATGAGACCCCTGTCGATGGATTCA +ATAATAACATCTCTCACCAAAGAAATCATCACACACAAATTCATATACTTGATAAACAATGAATGTATTG +TAAGAAAACTTGATGAAAGACAAGCTACATTTACATTCTTAGTCAATTATGAGATGAAGCTACTGCACAA +AGTAGGGAGTACCAAATACAAGAAATACACTGAATATAATACAAAATATGGCACTTTCCCCATGCCTATA +TTTATCAATCATGGCGGGTTTCTAGAATGTATTGGCATTAAGCCTACAAAACACACTCCTATAATATACA +AATATGACCTCAACCCGTAAATTCCAACAAAAAAAACCAACCCAACCAAACCAAGCTATTCCTCAAACAA +CAATGCTCAATAGTTAAGAAGGAGCTAATCCGTTTTAGTAATTAAAAATAAAAGTAAAGCCAATAACATA +AATTGGGGCAAATACAAAGATGGCTCTTAGCAAAGTCAAGTTAAATGATACATTAAATAAGGATCAGCTG +CTGTCATCCAGCAAATACACTATTCAACGTAGTACAGGAGATAATATTGACACTCCCAATTATGATGTGC +AAAAACACCTAAACAAACTATGTGGTATGCTATTAATCACTGAAGATGCAAATCATAAATTCACAGGATT +AATAGGTATGTTATATGCTATGTCCAGGTTAGGAAGGGAAGACACTATAAAGATACTTAAAGATGCTGGA +TATCATGTTAAAGCTAATGGAGTAGATATAACAACATATCGTCAAGATATAAATGGAAAGGAAATGAAAT +TCGAAGTATTAACATTATCAAGCTTGACATCAGAAATACAAGTCAATATTGAGATAGAATCTAGAAAATC +CTACAAAAAAATGCTAAAAGAGATGGGAGAAGTGGCTCCAGAATATAGGCATGATTCTCCAGACTGTGGG +ATGATAATACTGTGTATAGCAGCACTTGTAATAACCAAATTAGCAGCAGGAGACAGATCAGGTCTTACAG +CAGTAATTAGGAGGGCAAACAATGTCTTAAAAAATGAAATAAAACGCTACAAGGGTCTCATACCAAAGGA +TATAGCTAACAGTTTTTATGAAGTGTTTGAAAAACACCCTCATCTTATAGATGTTTTTGTGCACTTTGGC +ATTGCACAATCATCAACAAGAGGGGGTAGTAGAGTTGAAGGAATCTTTGCAGGATTGTTTATGAATGCCT +ATGGTTCAGGGCAAGTAATGCTAAGATGGGGAGTTTTAGCCAAATCTGTAAAAAATATCATGCTAGGTCA +TGCTAGTGTCCAGGCAGAAATGGAGCAAGTTGTGGAAGTCTATGAGTATGCACAGAAGTTGGGAGGAGAA +GCTGGATTCTACCATATATTGAACAATCCAAAAGCATCATTGCTGTCATTAACTCAATTTCCTAACTTCT +CAAGTGTGGTCCTAGGCAATGCAGCAGGTCTAGGCATAATGGGAGAGTATAGAGGTACGCCAAGAAACCA +GGATCTTTATGATGCAGCCAAAGCATATGCAGAGCAACTCAAAGAAAATGGAGTAATAAACTACAGTGTA +TTAGACTTAACAGCAGAAGAATTGGAAGCCATAAAGAATCAACTCAACCCTAAAGAAGATGATGTAGAGC +TTTAAGTTAACAAAAAATACGGGGCAAATAAGTCAACATGGAGAAGTTTGCACCTGAATTTCATGGAGAA +GATGCAAATAACAAAGCTACCAAATTCCTAGAATCAATAAAGGGCAAGTTCGCATCATCCAAAGATCCTA +AGAAGAAAGATAGCATAATATCTGTTAACTCAATAGATATAGAAGTAACCAAAGAGAGCCCGATAACATC +TGGCACCAACATCATCAATCCAACAAGTGAAGCCGACAGTACCCCAGAAACCAAAGCCAACTACCCAAGA +AAACCCCTAGTAAGCTTCAAAGAAGATCTCACCCCAAGTGACAACCCTTTTTCTAAGTTGTACAAAGAAA +CAATAGAAACATTTGATAACAATGAAGAAGAATCTAGCTACTCATATGAAGAGATAAATGATCAAACAAA +TGACAACATTACAGCAAGACTAGATAGAATTGATGAAAAATTAAGTGAAATATTAGGAATGCTCCATACA +TTAGTAGTTGCAAGTGCAGGACCCACTTCAGCTCGCGATGGAATAAGAGATGCTATGGTTGGTCTGAGAG +AAGAAATGATAGAAAAAATAAGAGCGGAAGCATTAATGACCAATGATAGGTTAGAGGCTATGGCAAGACT +TAGGAATGAGGAAAGCGAAAAAATGGCAAAAGACACCTCAGATGAAGTGCCTCTTAATCCAACTTCCAAA +AAATTGAGTGACTTGTTGGAAGACAACGATAGTGACAATGATCTGTCACTTGATGATTTTTGATCAGTGA +TCAACTCACTCAGCAATCAACAACATCAATAAAACAGACATCAATCCATTGAATCAACTGCCAGACCGAA +CAAACAAATGTCCGTCAGCGGAACCACCAACCAATCAATCAACCAACTGATCCATCAGCAACCTGACGAA +ATTAACAATATAGTAACAAAAAAAGAACAAGATGGGGCAAATATGGAAACATACGTGAACAAGCTTCACG +AAGGCTCCACATACACAGCAGCTGTTCAGTACAATGTTCTAGAAAAAGATGATGATCCTGCATCACTAAC +AATATGGGTGCCTATGTTCCAGTCATCTGTACCAGCAGACTTGCTCATAAAAGAACTTGCAAGCATCAAC +ATACTAGTGAAGCAGATCTCTACGCCCAAAGGACCTTCACTACGAGTCACGATTAACTCAAGAAGTGCTG +TGCTGGCTCAAATGCCTAGTAATTTCATCATAAGCGCAAATGTATCATTAGATGAAAGAAGCAAATTAGC +ATATGATGTAACTACACCTTGTGAAATCAAAGCATGCAGTCTAACATGCTTAAAAGTGAAAAGTATGTTA +ACTACAGTCAAAGATCTTACCATGAAGACATTCAACCCCACTCATGAGATCATTGCTCTATGTGAATTTG +AAAATATTATGACATCAAAAAGAGTAATAATACCAACCTATCTAAGACCAATTAGTGTCAAAAACAAGGA +TCTGAACTCACTAGAAAACATAGCAACCACCGAATTCAAAAATGCTATCACCAATGCGAAAATTATTCCC +TATGCTGGATTAGTATTAGTTATCACAGTTACTGACAATAAAGGAGCATTCAAATATATCAAGCCACAGA +GTCAATTTATAGTAGATCTTGGTGCCTACCTAGAAAAAGAGAGCATATATTATGTGACTACTAATTGGAA +GCATACAGCTACACGTTTTTCAATCAAACCACTAGAGGATTAAATTTAATTATCAACACTGAATGACAGG +TCCACATATATCCTCAAACTACACACTATATCCAAACATCATGAACATCTACACTACACACTTCATCACA +CAAACCAATCCCACTCAAAATCCAAAATCACTACCAGCCACTATCTGCTAGACCTAGAGTGCGAATAGGT +AAATAAAACCAAAATATGGGGTAAATAGACATTAGTTAGAGTTCAATCAATCTCAACAACCATTTATACC +GCCAATTCAATACATATACTATAAATCTTAAAATGGGAAATACATCCATCACAATAGAATTCACAAGCAA +ATTTTGGCCCTATTTTACACTAATACATATGATCTTAACTCTAATCTCTTTACTAATTATAATCACTATT +ATGATTGCAATACTAAATAAGCTAAGTGAACATAAAACATTCTGTAACAATACTCTTGAACTAGGACAGA +TGCATCAAATCAACACATAGTGCTCTACCATCATGCTGTGTCAAATTATAATCCTGTATATATAAACAAA +CAAATCCAATCTTCTCACAGAGTCATGGTGTCGCAAAACCACGCCAACTATCATGGTAGCATAGAGTAGT +TATTTAAAAATTAACATAATGATGAATTATTAGTATGGGATCAAAAACAACATTGGGGCAAATGCAACCA +TGTCCAAACACAAGAATCAACGCACTGCCAGGACTCTAGAAAAGACCTGGGATACTCTCAATCATCTAAT +TGTAATATCCTCTTGTTTATACAGATTAAATTTAAAATCTATAGCACAAATAGCACTATCAGTTCTGGCA +ATGATAATCTCAACCTCTCTCATAATTGCAGCCATAATATTCATCATCTCTGCCAATCACAAAGTTACAC +TAACAACGGTCACAGTTCAAACAATAAAAAACCACACTGAAAAAAACATCACCACCTACCTTACTCAAGT +CCCACCAGAAAGGGTTAGCTCATCCAAACAACCTACAACCACATCACCAATCCACACAAATTCAGCCACA +ACATCACCCAACACAAAGTCAGAAACACACCACACAACAGCACAAACCAAAGGCAGAACCACCACCTCAA +CACAGACCAACAAGCCGAGCACAAAACCACGCCTAAAAAATCCACCAAAAAAACCAAAAGATGATTACCA +TTTTGAAGTGTTCAACTTCGTTCCCTGTAGTATATGTGGCAACAATCAACTTTGCAAATCCATCTGTAAA +ACAATACCAAGCAACAAACCAAAGAAGAAACCAACCATCAAACCCACAAACAAACCAACCACCAAAACCA +CAAACAAAAGAGACCCAAAAACACCAGCCAAAACGACGAAAAAAGAAACTACCACCAACCCAACAAAAAA +ACCAACCCTCACGACCACAGAAAGAGACACCAGCACCTCACAATCCACTGTGCTCGACACAACCACATTA +GAACACACAATCCAACAGCAATCCCTCCACTCAACCACCCCCGAAAACACACCCAACTCCACACAAACAC +CCACAGCATCCGAGCCCTCTACATCAAATTCCACCCAAAATACCCAATCACATGCTTAGTTATTCAAAAA +CTACATCTTAGCAGAAAACCGTGACCTATCAAGCAAGAACGAAATTAAACCTGGGGCAAATAACCATGGA +GCTGCTGATCCACAGGTTAAGTGCAATCTTCCTAACTCTTGCTATTAATGCATTGTACCTCACCTCAAGT +CAGAACATAACTGAGGAGTTTTACCAATCGACATGTAGTGCAGTTAGCAGAGGTTATTTTAGTGCTTTAA +GAACAGGTTGGTATACCAGTGTCATAACAATAGAATTAAGTAATATAAAAGAAACCAAATGCAATGGAAC +TGACACTAAAGTAAAACTTATAAAACAAGAATTAGATAAGTATAAGAATGCAGTGACAGAATTACAGCTA +CTTATGCAAAACACACCAGCTGCCAACAACCGGGCCAGAAGAGAAGCACCACAGTATATGAACTATACAA +TCAATACCACTAAAAACCTAAATGTATCAATAAGCAAGAAGAGGAAACGAAGATTTCTGGGCTTCTTGTT +AGGTGTAGGATCTGCAATAGCAAGTGGTATAGCTGTATCCAAAGTTCTACACCTTGAAGGAGAAGTGAAC +AAGATCAAAAATGCTTTGTTATCTACAAACAAAGCTGTAGTCAGTCTATCAAATGGGGTCAGTGTTTTAA +CCAGCAAAGTGTTAGATCTCAAGAATTACATAAATAACCAATTATTACCCATAGTAAATCAACAGAGCTG +TCGCATCTCCAACATTGAAACAGTTATAGAATTCCAGCAGAAGAACAGCAGATTGTTGGAAATCAACAGA +GAATTCAGTGTCAATGCAGGTGTAACAACACCTTTAAGCACTTACATGTTAACAAACAGTGAGTTACTAT +CATTGATCAATGATATGCCTATAACAAATGATCAGAAAAAATTAATGTCAAGCAATGTTCAGATAGTAAG +GCAACAAAGTTATTCTATCATGTCTATAATAAAGGAAGAAGTCCTTGCATATGTTGTACAGCTACCTATC +TATGGTGTAATAGATACACCTTGCTGGAAATTACACACATCACCTCTATGCACCACCAACATCAAAGAAG +GATCAAATATTTGTTTAACAAGGACTGATAGAGGATGGTATTGTGATAATGCAGGATCAGTATCCTTCTT +TCCACAGGCTGACACTTGTAAAGTACAGTCCAATCGAGTATTTTGTGACACTATGAACAGTTTGACATTA +CCAAGTGAAGTCAGCCTTTGTAACACTGACATATTCAATTCCAAGTATGACTGCAAAATTATGACATCAA +AAACAGACATAAGCAGCTCAGTAATTACTTCTCTTGGAGCTATAGTGTCATGCTATGGTAAAACTAAATG +CACTGCATCCAACAAAAATCGTGGGATTATAAAGACATTTTCTAATGGTTGTGACTATGTGTCAAACAAA +GGAGTAGATACTGTGTCAGTGGGCAACACTTTATACTATGTAAACAAGCTGGAAGGCAAGAACCTTTATG +TAAAAGGGGAACCTATAATAAATTACTATGACCCTCTAGTGTTTCCTTCTGATGAGTTTGATGCATCAAT +ATCTCAAGTCAATGAAAAAATCAATCAAAGTTTAGCTTTTATTCGTAGATCTGATGAATTACTACATAAT +GTAAATACTGGCAAATCTACTACAAATATTATGATAACTACAATTATTATAGTAATCATTGTAGTATTGT +TATCATTAATAGCTATTGGTTTGCTGTTGTATTGCAAAGCCAAAAACACACCAGTTACACTAAGCAAAGA +CCAACTAAGTGGAATCAATAATATTGCATTCAGCAAATAGACAAAAAACCACCTGATCATGTTTCAACAA +CAGTCTGCTGATCACCAATCCCAAATCAACCCATAACAAACACTTCAACATCACAGTACAGGCTGAATCA +TTTCTTCACATCATGCTACCCACACAACTAAGCTAGATCCTTAACTCATAGTTACATAAAAACCTCAAGT +ATCACAATCAAACACTAAATCAACACATCATTCACAAAATTAACAGCTGGGGCAAATATGTCGCGAAGAA +ATCCTTGTAAATTTGAGATTAGAGGTCATTGCTTGAATGGTAGAAGATGTCACTACAGTCATAATTACTT +TGAATGGCCTCCTCATGCCTTACTAGTGAGGCAAAACTTCATGTTAAACAAGATACTCAAGTCAATGGAC +AAAAGCATAGACACTTTGTCTGAAATAAGTGGAGCTGCTGAACTGGACAGAACAGAAGAATATGCTCTTG +GTATAGTTGGAGTGCTAGAGAGTTACATAGGATCTATAAACAACATAACAAAACAATCAGCATGTGTTGC +TATGAGTAAACTTCTTATTGAGATCAATAGTGATGACATTAAAAAGCTGAGAGATAATGAAGAACCCAAT +TCACCTAAGATAAGAGTGTACAATACTGTTATATCATACATTGAGAGCAATAGAAAAAACAACAAGCAAA +CAATCCATCTGCTCAAAAGACTACCAGCAGACGTGCTGAAGAAGACAATAAAAAACACATTAGATATCCA +CAAAAGCATAATCATAAGCAACCCAAAAGAGTCAACCGTGAATGATCAAAATGACCAAACCAAAAATAAT +GATATTACCGGATAAATATCCTTGTAGTATATCATCCATATTGATTTCAAGTGAAAGCATGATTGCTACA +TTCAATCATAAAAACATATTACAATTTAACCATAACCATTTGGATAACCACCAGCGTTTATTAAATAATA +TATTTGATGAAATTCATTGGACACCTAAAAACTTATTAGATGCCACTCAACAATTTCTCCAACATCTTAA +CATCCCTGAAGATATATATACAATATATATATTAGTGTCATAATGCTTGGCCATAACGATTCTATATCAT +CCAACCATAAAACTATCTTAATAAGGTTATGGGACAAAATGGATCCCATTATTAATGGAAACTCTGCTAA +TGTGTATCTAACTGATAGTTATTTAAAAGGTGTTATCTCTTTTTCAGAATGTAATGCTTTAGGGAGTTAC +CTTTTTAACGGCCCTTATCTCAAAAATGATTACACCAACTTAATTAGTAGACAAAGTCCACTACTAGAGC +ATATGAATCTTAAAAAACTAACTATAACACAGTCATTAATATCTAGATATCATAAAGGTGAACTGAAATT +AGAAGAACCAACTTATTTCCAGTCATTACTTATGACATATAAAAGCATGTCCTCGTCTGAACAAATTGCT +ACAACTAACTTACTTAAAAAAATAATACGAAGAGCTATAGAAATAAGTGATGTAAAGGTGTACGCCATCT +TGAATAAACTAGGACTAAAGGAAAAGGACAGAGTTAAGCCCAACAATAATTCAGGTGATGAAAACTCAGT +ACTTACAACTATAATTAAAGATGATATACTTTCGGCTGTGGAAAGCAATCAATCATATACAAATTCAGAC +AAAAATCACTCAGTAAATCAAAATATCACTATCAAAACAACACTCTTGAAAAAATTGATGTGTTCAATGC +AACATCCTCCATCATGGTTAATACACTGGTTCAATTTATATACAAAATTAAATAACATATTAACACAATA +TCGATCAAATGAGGTAAAAAGTCATGGGTTTATATTAATAGATAATCAAACTTTAAGTGGTTTTCAGTTT +ATTTTAAATCAATATGGTTGTATCGTTTATCATAAAGGACTCAAAAAAATCACAACTACTACTTACAATC +AATTTTTAACATGGAAAGACATCAGCCTTAGCAGATTAAATGTTTGCTTAATTACTTGGATAAGTAATTG +TTTGAATACATTAAATAAAAGCTTAGGGCTGAGATGTGGATTCAATAATGTTGTGTTATCACAATTATTT +CTTTATGGAGATTGTATACTGAAATTATTTCATAATGAAGGCTTCTACATAATAAAAGAAGTAGAGGGAT +TTATTATGTCTTTAATTCTAAACATAACAGAAGAAGATCAATTTAGGAAACGATTTTATAATAGCATGCT +AAATAACATCACAGATGCAGCTATTAAGGCTCAAAAGAACCTACTATCAAGGGTATGTCACACTTTATTA +GACAAGACAGTGTCTGATAATATCATAAATGGTAAATGGATAATCCTATTAAGTAAATTTCTTAAATTGA +TTAAGCTTGCAGGTGATAATAATCTCAATAATTTGAGTGAGCTATATTTTCTCTTCAGAATCTTTGGACA +TCCAATGGTTGATGAAAGACAAGCAATGGATGCTGTAAGAATTAACTGTAATGAAACTAAGTTCTACTTA +TTAAGTAGTCTAAGTACGTTAAGAGGTGCTTTCATTTATAGAATCATAAAAGGGTTTGTAAATACCTACA +ACAGATGGCCCACTTTAAGGAATGCTATTGTCCTACCTCTAAGATGGTTAAACTATTATAAACTTAATAC +TTATCCATCTCTACTTGAAATCACAGAAAATGATTTGATTATTTTATCAGGATTGCGGTTCTATCGTGAA +TTTCATCTGCCTAAAAAAGTGGATCTTGAAATGATAATAAATGACAAAGCCATTTCACCTCCAAAAGATC +TAATATGGACTAGTTTTCCTAGAAATTACATGCCATCACATATACAAAATTATATAGAACATGAAAAGTT +GAAGTTCTCTGAAAGCGACAGATCAAGAAGAGTACTAGAGTATTACTTGAGAGATAATAAATTCAATGAA +TGCGATCTATACAATTGTGTAGTCAATCAAAGCTATCTCAACAACTCTAATCACGTGGTATCACTAACTG +GTAAAGAAAGAGAGCTCAGTGTAGGTAGAATGTTTGCTATGCAACCAGGTATGTTTAGGCAAATCCAAAT +CTTAGCAGAGAAAATGATAGCCGAAAATATTTTACAATTCTTCCCTGAGAGTTTGACAAGATATGGTGAT +CTAGAGCTTCAAAAGATATTAGAATTAAAAGCAGGAATAAGCAACAAGTCAAATCGTTATAATGATAACT +ACAACAATTATATCAGTAAATGTTCTATCATTACAGATCTTAGCAAATTCAATCAAGCATTTAGATATGA +AACATCATGTATCTGCAGTGATGTATTAGATGAACTGCATGGAGTACAATCTCTGTTCTCTTGGTTGCAT +TTAACAATACCTCTTGTCACAATAATATGTACATATAGACATGCACCTCCTTTCATAAAGGATCATGTTG +TTAATCTTAATGAAGTTGATGAACAAAGTGGATTATACAGATATCATATGGGTGGTATTGAGGGCTGGTG +TCAAAAACTGTGGACCATTGAAGCTATATCATTATTAGATCTAATATCTCTCAAAGGGAAATTCTCTATC +ACAGCTCTGATAAATGGTGATAATCAGTCAATTGATATAAGTAAACCAGTTAGACTTATAGAGGGTCAGA +CCCATGCTCAAGCAGATTATTTGTTAGCATTAAATAGCCTTAAATTGCTATATAAAGAGTATGCAGGTAT +AGGCCATAAGCTTAAGGGAACAGAGACCTATATATCCCGAGATATGCAGTTCATGAGCAAAACAATCCAG +CACAATGGAGTGTACTATCCAGCCAGTATCAAAAAAGTCCTGAGAGTAGGTCCATGGATAAATACAATAC +TTGATGATTTTAAAGTTAGTTTAGAATCTATAGGTAGCTTAACACAGGAGTTAGAATACAGAGGGGAAAG +CTTATTATGCAGTTTAATATTTAGGAACATTTGGTTATACAATCAAATTGCTTTGCAACTCCGAAATCAT +GCATTATGTAACAATAAGCTATATTTAGATATATTGAAAGTATTAAAACACTTAAAAACTTTTTTTAATC +TTGATAGTATCGATATGGCGTTATCATTGTATATGAATTTGCCTATGCTGTTTGGTGGTGGTGATCCTAA +TTTGTTATATCGAAGCTTTTATAGGAGAACTCCAGACTTCCTTACAGAAGCTATAGTACATTCAGTGTTT +GTGTTGAGCTATTATACTGGTCACGATTTACAAGATAAGCTCCAGGATCTTCCAGATGATAGACTGAACA +AATTCTTGACATGTGTCATCACATTCGATAAAAATCCCAATGCCGAGTTTGTAACATTGATGAGGGATCC +ACAGGCGTTAGGGTCTGAAAGGCAAGCTAAAATTACTAGTGAGATTAATAGATTAGCAGTAACAGAAGTC +TTAAGTATAGCTCCAAACAAAATATTTTCTAAAAGTGCACAACATTATACTACCACTGAGATTGATCTAA +ATGACATTATGCAAAATATAGAACCAACTTACCCTCATGGATTAAGAGTTGTTTATGAAAGTCTACCTTT +TTATAAAGCAGAAAAAATAGTTAATCTTATATCAGGAACAAAATCCATAACTAATATACTTGAAAAAACA +TCAGCAATAGATACAACTGATATTAATAGGGCTACTGATATGATGAGGAAAAATATAACTTTACTTATAA +GGATACTTCCACTAGATTGTAACAAAGACAAAAGAGAGTTATTAAGTTTAGAAAATCTTAGTATAACTGA +ATTAAGCAAGTATGTAAGAGAAAGATCTTGGTCATTATCCAATATAGTAGGAGTAACATCGCCAAGTATT +ATGTTCACAATGGACATTAAATATACAACTAGCACTATAGCCAGTGGTATAATTATAGAAAAATATAATG +TTAATAGTTTAACTCGTGGTGAAAGAGGACCTACTAAGCCATGGGTAGGTTCATCTACGCAGGAGAAAAA +AACAATGCCAGTGTACAATAGACAAGTTTTAACCAAAAAGCAAAGAGACCAAATAGATTTATTAGCAAAA +TTAGACTGGGTATATGCATCCATAGACAACAAAGATGAATTCATGGAAGAACTGAGTACTGGAACACTTG +GACTGTCATATGAAAAAGCCAAAAAGTTGTTTCCACAATATCTAAGTGTCAATTATTTACACCGTTTAAC +AGTCAGTAGTAGACCATGTGAATTCCCTGCATCAATACCAGCTTATAGAACAACAAATTATCATTTCGAT +ACTAGTCCTATCAATCATGTATTAACAGAAAAGTATGGAGATGAAGATATCGACATTGTGTTTCAAAATT +GCATAAGTTTTGGTCTTAGCCTGATGTCGGTTGTGGAACAATTCACAAACATATGTCCTAATAGAATTAT +TCTCATACCGAAGCTGAATGAGATACATTTGATGAAACCTCCTATATTTACAGGAGATGTTGATATCATC +AAGTTGAAGCAAGTGATACAAAAACAGCATATGTTCCTACCAGATAAAATAAGTTTAACCCAATATGTAG +AATTATTCCTAAGTAACAAAGCACTTAAATCTGGATCTAACATCAATTCTAATTTAATATTAGTACATAA +AATGTCTGATTATTTTCATAATGCTTATATTTTAAGTACTAATTTAGCTGGACATTGGATTCTAATTATT +CAACTTATGAAAGATTCAAAAGGTATTTTTGAAAAAGATTGGGGAGAGGGGTACATAACTGATCATATGT +TCATTAATTTGAATGTTTTCTTTAATGCTTATAAGACTTATTTGCTATGTTTTCATAAAGGTTATGGTAA +AGCAAAATTAGAATGTGATATGAACACTTCAGATCTTCTTTGTGTTTTGGAGTTAATAGACAGTAGCTAC +TGGAAATCTATGTCTAAAGTTTTCCTAGAACAAAAAGTCATAAAATACATAGTCAATCAAGACACAAGTT +TGCATAGAATAAAAGGCTGTCACAGTTTTAAGTTGTGGTTTTTAAAACGCCTTAATAATGCTAAATTTAC +CGTATGCCCTTGGGTTGTTAACATAGATTATCACCCAACACATATGAAAGCTATATTATCTTACATAGAT +TTAGTTAGAATGGGGTTAATAAATGTAGATAAATTAACCATTAAAAATAAAAACAAATTCAATGATGAAT +TTTACACATCAAATCTCTTTTACATTAGTTATAACTTTTCAGACAACACTCATTTGCTAACAAAACAAAT +AAGAATTGCTAATTCAGAATTAGAAGATAATTATAACAAACTATATCACCCAACCCCAGAAACTTTAGAA +AATATATCATTAATTCCTGTTAAAAGTAATAATAGTAACAAACCTAAATTTTGTATAAGTGGAAATACCG +AATCTATAATGATGTCAACATTCTCTAATAAAATGCATATTAAATCTTCCACTGTTACCACAAGATTCAA +TTATAGCAAACAAGACTTGTACAATTTATTTCCAAATGTTGTGATAGACAGGATTATAGATCATTCAGGT +AATACAGCAAAATCTAACCAACTTTACATCACCACTTCACATCAGACATCTTTAGTAAGGAATAGTGCAT +CACTTTATTGCATGCTTCCTTGGCATCATGTCAATAGATTTAACTTTGTATTTAGTTCCACAGGATGCAA +GATCAGTATAGAGTATATTTTAAAAGATCTTAAGATTAAGGACCCCAGTTGTATAGCATTCATAGGTGAA +GGAGCTGGTAACTTATTATTACGTACGGTAGTAGAACTTCATCCAGACATAAGATACATTTACAGAAGTT +TAAAAGATTGCAATGATCATAGTTTACCTATTGAATTTCTAAGATTATACAACGGGCATATAAACATAGA +TTATGGTGAGAATTTAACCATTCCTGCTACAGATGCAACTAATAACATTCATTGGTCTTATTTACATATA +AAATTTGCAGAACCTATTAGCATCTTTGTCTGCGATGCTGAATTACCTGTTACAGCCAATTGGAGTAAAA +TTATAATTGAATGGAGTAAGCATGTAAGAAAGTGCAAGTACTGTTCTTCTGTAAATAGATGCATTTTAAT +CGCAAAATATCATGCTCAAGATGATATTGATTTCAAATTAGATAACATTACTATATTAAAAACTTACGTG +TGCCTAGGTAGCAAGTTAAAAGGATCTGAAGTTTACTTAGTCCTTACAATAGGCCCTGCAAATATACTTC +CTGTTTTTGATGTTGTGCAAAATGCTAAATTGATTTTTTCAAGAACTAAAAATTTCATTATGCCTAAAAA +AACTGACAAGGAATCTATCGATGCAAATATTAAAAGCTTAATACCTTTCCTTTGTTACCCTATAACAAAA +AAAGGAATTAAGACTTCATTGTCAAAATTGAAGAGTGTAGTTAATGGGGATATATTATCATATTCTATAG +CTGGACGTAATGAAGTATTCAGCAACAAGCTTATAAACCACAAGCATATGAATATCCTAAAATGGCTAGA +TCATGTTTTAAATTTTAGATCAGCTGAACTTAATTACAATCATTTATACATGATAGAGTCCACATATCCT +TACTTAAGTGAATTGTTAAATAGTTTAACAACCAATGAGCTCAAGAAACTGATTAAAATAACAGGTAGTG +TACTATACAACCTTCCCAACGAACAGTAACTTAAAATATCATTAACAAGTTTGGTCAAATTTAGATGCTA +ACACATCATTATATTATAGTTATTAAAAAATATGCAAACTTTTCAATAATTTAGCTTACTGATTCCAAAA +TTATCATTTTATTTTTAAGGGGTTGAATAAAAGTCTAAAACTAACAATGATACATGTGCATTTACAACAC +AACGAGACATTAGTTTTTGACACTTTTTTTCTCGT + diff --git a/primerschemes/rsva-rsvb/1000/v1.0.0/work/NC_038235.1.fasta b/primerschemes/rsva-rsvb/1000/v1.0.0/work/NC_038235.1.fasta new file mode 100644 index 0000000..8e051a5 --- /dev/null +++ b/primerschemes/rsva-rsvb/1000/v1.0.0/work/NC_038235.1.fasta @@ -0,0 +1,220 @@ +>NC_038235.1 Human orthopneumovirus Subgroup A, complete cds +ACGCGAAAAAATGCGTACAACAAACTTGCATAAACCAAAAAAATGGGGCAAATAAGAATTTGATAAGTAC +CACTTAAATTTAACTCCCTTGGTTAGAGATGGGCAGCAATTCATTGAGTATGATAAAAGTTAGATTACAA +AATTTGTTTGACAATGATGAAGTAGCATTGTTAAAAATAACATGCTATACTGATAAATTAATACATTTAA +CTAACGCTTTGGCTAAGGCAGTGATACATACAATCAAATTGAATGGCATTGTGTTTGTGCATGTTATTAC +AAGTAGTGATATTTGCCCTAATAATAATATTGTAGTAAAATCCAATTTCACAACAATGCCAGTACTACAA +AATGGAGGTTATATATGGGAAATGATGGAATTAACACATTGCTCTCAACCTAATGGTCTACTAGATGACA +ATTGTGAAATTAAATTCTCCAAAAAACTAAGTGATTCAACAATGACCAATTATATGAATCAATTATCTGA +ATTACTTGGATTTGATCTTAATCCATAAATTATAATTAATATCAACTAGCAAATCAATGTCACTAACACC +ATTAGTTAATATAAAACTTAACAGAAGACAAAAATGGGGCAAATAAATCAATTCAGCCAACCCAACCATG +GACACAACCCACAATGATAATACACCACAAAGACTGATGATCACAGACATGAGACCGTTGTCACTTGAGA +CCATAATAACATCACTAACCAGAGACATCATAACACACAAATTTATATACTTGATAAATCATGAATGCAT +AGTGAGAAAACTTGATGAAAAACAGGCCACATTTACATTCCTGGTCAACTATGAAATGAAACTATTACAC +AAAGTAGGAAGCACTAAATATAAAAAATATACTGAATACAACACAAAATATGGCACTTTCCCTATGCCAA +TATTCATCAATCATGATGGGTTCTTAGAATGCATTGGCATTAAGCCTACAAAGCATACTCCCATAATATA +CAAGTATGATCTCAATCCATAAATTTCAACACAATATTCACACAATCTAAAACAACAACTCTATGCATAA +CTATACTCCATAGTCCAGATGGAGCCTGAAAATTATAGTAATTTAAAATTAAGGAGAGATATAAGATAGA +AGATGGGGCAAATACAAAGATGGCTCTTAGCAAAGTCAAGTTGAATGATACACTCAACAAAGATCAACTT +CTGTCATCCAGCAAATACACCATCCAACGGAGCACAGGAGATAGTATTGATACTCCTAATTATGATGTGC +AGAAACACATCAATAAGTTATGTGGCATGTTATTAATCACAGAAGATGCTAATCATAAATTCACTGGGTT +AATAGGTATGTTATATGCGATGTCTAGGTTAGGAAGAGAAGACACCATAAAAATACTCAGAGATGCGGGA +TATCATGTAAAAGCAAATGGAGTAGATGTAACAACACATCGTCAAGACATTAATGGAAAAGAAATGAAAT +TTGAAGTGTTAACATTGGCAAGCTTAACAACTGAAATTCAAATCAACATTGAGATAGAATCTAGAAAATC +CTACAAAAAAATGCTAAAAGAAATGGGAGAGGTAGCTCCAGAATACAGGCATGACTCTCCTGATTGTGGG +ATGATAATATTATGTATAGCAGCATTAGTAATAACTAAATTAGCAGCAGGGGACAGATCTGGTCTTACAG +CCGTGATTAGGAGAGCTAATAATGTCCTAAAAAATGAAATGAAACGTTACAAAGGCTTACTACCCAAGGA +CATAGCCAACAGCTTCTATGAAGTGTTTGAAAAACATCCCCACTTTATAGATGTTTTTGTTCATTTTGGT +ATAGCACAATCTTCTACCAGAGGTGGCAGTAGAGTTGAAGGGATTTTTGCAGGATTGTTTATGAATGCCT +ATGGTGCAGGGCAAGTGATGTTACGGTGGGGAGTCTTAGCAAAATCAGTTAAAAATATTATGTTAGGACA +TGCTAGTGTGCAAGCAGAAATGGAACAAGTTGTTGAGGTTTATGAATATGCCCAAAAATTGGGTGGTGAA +GCAGGATTCTACCATATATTGAACAACCCAAAAGCATCATTATTATCTTTGACTCAATTTCCTCACTTCT +CCAGTGTAGTATTAGGCAATGCTGCTGGCCTAGGCATAATGGGAGAGTACAGAGGTACACCGAGGAATCA +AGATCTATATGATGCAGCAAAGGCATATGCTGAACAACTCAAAGAAAATGGTGTGATTAACTACAGTGTA +CTAGACTTGACAGCAGAAGAACTAGAGGCTATCAAACATCAGCTTAATCCAAAAGATAATGATGTAGAGC +TTTGAGTTAATAAAAAATGGGGCAAATAAATCATCATGGAAAAGTTTGCTCCTGAATTCCATGGAGAAGA +TGCAAACAACAGGGCTACTAAATTCCTAGAATCAATAAAGGGCAAATTCACATCACCCAAAGATCCCAAG +AAAAAAGATAGTATCATATCTGTCAACTCAATAGATATAGAAGTAACCAAAGAAAGCCCTATAACATCAA +ATTCAACTATTATCAACCCAACAAATGAGACAGATGATACTGCAGGGAACAAGCCCAATTATCAAAGAAA +ACCTCTAGTAAGTTTCAAAGAAGACCCTACACCAAGTGATAATCCCTTTTCTAAACTATACAAAGAAACC +ATAGAAACATTTGATAACAATGAAGAAGAATCCAGCTATTCATACGAAGAAATAAATGATCAGACAAACG +ATAATATAACAGCAAGATTAGATAGGATTGATGAAAAATTAAGTGAAATACTAGGAATGCTTCACACATT +AGTAGTGGCAAGTGCAGGACCTACATCTGCTCGGGATGGTATAAGAGATGCCATGATTGGTTTAAGAGAA +GAAATGATAGAAAAAATCAGAACTGAAGCATTAATGACCAATGACAGATTAGAAGCTATGGCAAGACTCA +GGAATGAGGAAAGTGAAAAGATGGCAAAAGACACATCAGATGAAGTGTCTCTCAATCCAACATCAGAGAA +ATTGAACAACCTATTGGAAGGGAATGATAGTGACAATGATCTATCACTTGAAGATTTCTGATTAGTTACC +ACTCTTCACATCAACACACAATACCAACAGAAGACCAACAAACTAACCAACCCAATCATCCAACCAAACA +TCCATCCGCCAATCAGCCAAACAGCCAACAAAACAACCAGCCAATCCAAAACTAACCACCCGGAAAAAAT +CTATAATATAGTTACAAAAAAAGGAAAGGGTGGGGCAAATATGGAAACATACGTGAACAAGCTTCACGAA +GGCTCCACATACACAGCTGCTGTTCAATACAATGTCTTAGAAAAAGACGATGACCCTGCATCACTTACAA +TATGGGTGCCCATGTTCCAATCATCTATGCCAGCAGATTTACTTATAAAAGAACTAGCTAATGTCAACAT +ACTAGTGAAACAAATATCCACACCCAAGGGACCTTCACTAAGAGTCATGATAAACTCAAGAAGTGCAGTG +CTAGCACAAATGCCCAGCAAATTTACCATATGCGCTAATGTGTCCTTGGATGAAAGAAGCAAACTAGCAT +ATGATGTAACCACACCCTGTGAAATCAAGGCATGTAGTCTAACATGCCTAAAATCAAAAAATATGTTGAC +TACAGTTAAAGATCTCACTATGAAGACACTCAACCCTACACATGATATTATTGCTTTATGTGAATTTGAA +AACATAGTAACATCAAAAAAAGTCATAATACCAACATACCTAAGATCCATCAGTGTCAGAAATAAAGATC +TGAACACACTTGAAAATATAACAACCACTGAATTCAAAAATGCTATCACAAATGCAAAAATCATCCCTTA +CTCAGGATTACTATTAGTCATCACAGTGACTGACAACAAAGGAGCATTCAAATACATAAAGCCACAAAGT +CAATTCATAGTAGATCTTGGAGCTTACCTAGAAAAAGAAAGTATATATTATGTTACCACAAATTGGAAGC +ACACAGCTACACGATTTGCAATCAAACCCATGGAAGATTAACCTTTTTCCTCTACATCAGTGTGTTAATT +CATACAAACTTTCTACCTACATTCTTCACTTCACCATCACAATCACAAACACTCTGTGGTTCAACCAATC +AAACAAAACTTATCTGAAGTCCCAGATCATCCCAAGTCATTGTTTATCAGATCTAGTACTCAAATAAGTT +AATAAAAAATATACACATGGGGCAAATAATCATTGGAGGAAATCCAACTAATCACAATATCTGTTAACAT +AGACAAGTCCACACACCATACAGAATCAACCAATGGAAAATACATCCATAACAATAGAATTCTCAAGCAA +ATTCTGGCCTTACTTTACACTAATACACATGATCACAACAATAATCTCTTTGCTAATCATAATCTCCATC +ATGATTGCAATACTAAACAAACTTTGTGAATATAACGTATTCCATAACAAAACCTTTGAGTTACCAAGAG +CTCGAGTCAACACATAGCATTCATCAATCCAACAGCCCAAAACAGTAACCTTGCATTTAAAAATGAACAA +CCCCTACCTCTTTACAACACCTCATTAACATCCCACCATGCAAACCACTATCCATACTATAAAGTAGTTA +ATTAAAAATAGTCATAACAATGAACTAGGATATCAAGACTAACAATAACATTGGGGCAAATGCAAACATG +TCCAAAAACAAGGACCAACGCACCGCTAAGACATTAGAAAGGACCTGGGACACTCTCAATCATTTATTAT +TCATATCATCGTGCTTATATAAGTTAAATCTTAAATCTGTAGCACAAATCACATTATCCATTCTGGCAAT +GATAATCTCAACTTCACTTATAATTGCAGCCATCATATTCATAGCCTCGGCAAACCACAAAGTCACACCA +ACAACTGCAATCATACAAGATGCAACAAGCCAGATCAAGAACACAACCCCAACATACCTCACCCAGAATC +CTCAGCTTGGAATCAGTCCCTCTAATCCGTCTGAAATTACATCACAAATCACCACCATACTAGCTTCAAC +AACACCAGGAGTCAAGTCAACCCTGCAATCCACAACAGTCAAGACCAAAAACACAACAACAACTCAAACA +CAACCCAGCAAGCCCACCACAAAACAACGCCAAAACAAACCACCAAGCAAACCCAATAATGATTTTCACT +TTGAAGTGTTCAACTTTGTACCCTGCAGCATATGCAGCAACAATCCAACCTGCTGGGCTATCTGCAAAAG +AATACCAAACAAAAAACCAGGAAAGAAAACCACTACCAAGCCCACAAAAAAACCAACCCTCAAGACAACC +AAAAAAGATCCCAAACCTCAAACCACTAAATCAAAGGAAGTACCCACCACCAAGCCCACAGAAGAGCCAA +CCATCAACACCACCAAAACAAACATCATAACTACACTACTCACCTCCAACACCACAGGAAATCCAGAACT +CACAAGTCAAATGGAAACCTTCCACTCAACTTCCTCCGAAGGCAATCCAAGCCCTTCTCAAGTCTCTACA +ACATCCGAGTACCCATCACAACCTTCATCTCCACCCAACACACCACGCCAGTAGTTACTTAAAAACATAT +TATCACAAAAAGCCATGACCAACTTAAACAGAATCAAAATAAACTCTGGGGCAAATAACAATGGAGTTGC +TAATCCTCAAAGCAAATGCAATTACCACAATCCTCACTGCAGTCACATTTTGTTTTGCTTCTGGTCAAAA +CATCACTGAAGAATTTTATCAATCAACATGCAGTGCAGTTAGCAAAGGCTATCTTAGTGCTCTGAGAACT +GGTTGGTATACCAGTGTTATAACTATAGAATTAAGTAATATCAAGGAAAATAAGTGTAATGGAACAGATG +CTAAGGTAAAATTGATAAAACAAGAATTAGATAAATATAAAAATGCTGTAACAGAATTGCAGTTGCTCAT +GCAAAGCACACCACCAACAAACAATCGAGCCAGAAGAGAACTACCAAGGTTTATGAATTATACACTCAAC +AATGCCAAAAAAACCAATGTAACATTAAGCAAGAAAAGGAAAAGAAGATTTCTTGTTTTTTTGTTAGGTG +TTGGATCTGCAATCGCCAGTGGCGTTGCTGTATCTAAGGTCCTGCACCTAGAAGGGGAAGTGAACAAGAT +CAAAAGTGCTCTACTATCCACAAACAAGGCTCTAGTCAGCTTATCAAATGGAGTTAGTGTCTTAACCAGC +AAAGTGTTAGACCTCAAAAACTATATAGATAAACAATTGTTACCTATTGTGAACAAGCAAAGCTGCAGCA +TATCAAATATAGAAACTGTGATAGAGTTCCAACAAAAGAACAACAGACTACTAGAGATTACCAGGGAATT +TAGTGTTAATGCAGGTGTAACTACACCTGTAAGCACTTACATGTTAACTAATAGTGAATTATTGTCATTA +ATCAATGATATGCCTATAACAAATGATCAGAAAAAGTTAATGTCCAACAATGTTCAAATAGTTAGACAGC +AAAGTTACTCTATCATGTCCATAATAAAAGAGGAAGTCTTAGCATATGTAGTACAATTACCACTATATGG +TGTTATAGATACACCCTGTTGGAAACTACACACATCCCCTCTATGTACAACCAACACAAAAGAAGGGTCC +AACATCTGTTTAACAAGAACTGACAGAGGATGGTACTGTGACAATGCAGGATCAGTATCTTTCTTCCCAC +AAGCTGAAACATGTAAAGTTCAATCAAATCGAGTATTTTGTGACACAATGAACAGTTTAACATTACCAAG +TGAAATAAATCTCTGCAATGTTGACATATTCAACCCCAAATATGATTGTAAAATTATGACTTCAAAAACA +GATGTAAGCAGCTCCGTTATCACATCTCTAGGAGCCATTGTGTCATGCTATGGCAAAACTAAATGTACAG +CATCCAATAAAAATCGTGGAATCATAAAGACATTTTCTAACGGGTGCGATTATGTATCAAATAAAGGGAT +GGACACTGTGTCTGTAGGTAACACATTATATTATGTAAATAAGCAAGAAGGTAAAAGTCTCTATGTAAAA +GGTGAACCAATAATAAATTTCTATGACCCATTAGTATTCCCCTCTGATGAATTTGATGCATCAATATCTC +AAGTCAACGAGAAGATTAACCAGAGCCTAGCATTTATTCGTAAATCCGATGAATTATTACATAATGTAAA +TGCTGGTAAATCCACCACAAATATCATGATAACTACTATAATTATAGTGATTATAGTAATATTGTTATCA +TTAATTGCTGTTGGACTGCTCTTATACTGTAAGGCCAGAAGCACACCAGTCACACTAAGCAAAGATCAAC +TGAGTGGTATAAATAATATTGCATTTAGTAACTAAATAAAAATAGCACCTAATCATGTTCTTACAATGGT +TTACTATCTGCTCATAGACAACCCATCTGTCATTGGATTTTCTTAAAATCTGAACTTCATCGAAACTCTC +ATCTATAAACCATCTCACTTACACTATTTAAGTAGATTCCTAGTTTATAGTTATATAAAACACAATTGAA +TGCCAGATTAACTTACCATCTGTAAAAATGAAAACTGGGGCAAATATGTCACGAAGGAATCCTTGCAAAT +TTGAAATTCGAGGTCATTGCTTAAATGGTAAGAGGTGTCATTTTAGTCATAATTATTTTGAATGGCCACC +CCATGCACTGCTTGTAAGACAAAACTTTATGTTAAACAGAATACTTAAGTCTATGGATAAAAGTATAGAT +ACCTTATCAGAAATAAGTGGAGCTGCAGAGTTGGACAGAACAGAAGAGTATGCTCTTGGTGTAGTTGGAG +TGCTAGAGAGTTATATAGGATCAATAAACAATATAACTAAACAATCAGCATGTGTTGCCATGAGCAAACT +CCTCACTGAACTCAATAGTGATGATATCAAAAAGCTGAGGGACAATGAAGAGCTAAATTCACCCAAGATA +AGAGTGTACAATACTGTCATATCATATATTGAAAGCAACAGGAAAAACAATAAACAAACTATCCATCTGT +TAAAAAGATTGCCAGCAGACGTATTGAAGAAAACCATCAAAAACACATTGGATATCCATAAGAGCATAAC +CATCAACAACCCAAAAGAATCAACTGTTAGTGATACAAATGACCATGCCAAAAATAATGATACTACCTGA +CAAATATCCTTGTAGTATAACTTCCATACTAATAACAAGTAGATGTAGAGTTACTATGTATAATCAAAAG +AACACACTATATTTCAATCAAAACAACCCAAATAACCATATGTACTCACCGAATCAAACATTCAATGAAA +TCCATTGGACCTCTCAAGAATTGATTGACACAATTCAAATTTTTCTACAACATCTAGGTATTATTGAGGA +TATATATACAATATATATATTAGTGTCATAACACTCAATTCTAACACTCACCACATCGTTACATTATTAA +TTCAAACAATTCAAGTTGTGGGACAAAATGGATCCCATTATTAATGGAAATTCTGCTAATGTTTATCTAA +CCGATAGTTATTTAAAAGGTGTTATCTCTTTCTCAGAGTGTAATGCTTTAGGAAGTTACATATTCAATGG +TCCTTATCTCAAAAATGATTATACCAACTTAATTAGTAGACAAAATCCATTAATAGAACACATGAATCTA +AAGAAACTAAATATAACACAGTCCTTAATATCTAAGTATCATAAAGGTGAAATAAAATTAGAAGAACCTA +CTTATTTTCAGTCATTACTTATGACATACAAGAGTATGACCTCGTCAGAACAGATTGCTACCACTAATTT +ACTTAAAAAGATAATAAGAAGAGCTATAGAAATAAGTGATGTCAAAGTCTATGCTATATTGAATAAACTA +GGGCTTAAAGAAAAGGACAAGATTAAATCCAACAATGGACAAGATGAAGACAACTCAGTTATTACGACCA +TAATCAAAGATGATATACTTTCAGCTGTTAAAGATAATCAATCTCATCTTAAAGCAGACAAAAATCACTC +TACAAAACAAAAAGACACAATCAAAACAACACTCTTGAAGAAATTGATGTGTTCAATGCAACATCCTCCA +TCATGGTTAATACATTGGTTTAACTTATACACAAAATTAAACAACATATTAACACAGTATCGATCAAATG +AGGTAAAAAACCATGGGTTTACATTGATAGATAATCAAACTCTTAGTGGATTTCAATTTATTTTGAACCA +ATATGGTTGTATAGTTTATCATAAGGAACTCAAAAGAATTACTGTGACAACCTATAATCAATTCTTGACA +TGGAAAGATATTAGCCTTAGTAGATTAAATGTTTGTTTAATTACATGGATTAGTAACTGCTTGAACACAT +TAAATAAAAGCTTAGGCTTAAGATGCGGATTCAATAATGTTATCTTGACACAACTATTCCTTTATGGAGA +TTGTATACTAAAGCTATTTCACAATGAGGGGTTCTACATAATAAAAGAGGTAGAGGGATTTATTATGTCT +CTAATTTTAAATATAACAGAAGAAGATCAATTCAGAAAACGATTTTATAATAGTATGCTCAACAACATCA +CAGATGCTGCTAATAAAGCTCAGAAAAATCTGCTATCAAGAGTATGTCATACATTATTAGATAAGACAGT +GTCCGATAATATAATAAATGGCAGATGGATAATTCTATTAAGTAAGTTCCTTAAATTAATTAAGCTTGCA +GGTGACAATAACCTTAACAATCTGAGTGAACTATATTTTTTGTTCAGAATATTTGGACACCCAATGGTAG +ATGAAAGACAAGCCATGGATGCTGTTAAAATTAATTGCAATGAGACCAAATTTTACTTGTTAAGCAGTCT +GAGTATGTTAAGAGGTGCCTTTATATATAGAATTATAAAAGGGTTTGTAAATAATTACAACAGATGGCCT +ACTTTAAGAAATGCTATTGTTTTACCCTTAAGATGGTTAACTTACTATAAACTAAACACTTATCCTTCTT +TGTTGGAACTTACAGAAAGAGATTTGATTGTGTTATCAGGACTACGTTTCTATCGTGAGTTTCGGTTGCC +TAAAAAAGTGGATCTTGAAATGATTATAAATGATAAAGCTATATCACCTCCTAAAAATTTGATATGGACT +AGTTTCCCTAGAAATTACATGCCATCACACATACAAAACTATATAGAACATGAAAAATTAAAATTTTCCG +AGAGTGATAAATCAAGAAGAGTATTAGAGTATTATTTAAGAGATAACAAATTCAATGAATGTGATTTATA +CAACTGTGTAGTTAATCAAAGTTATCTCAACAACCCTAATCATGTGGTATCATTGACAGGCAAAGAAAGA +GAACTCAGTGTAGGTAGAATGTTTGCAATGCAACCGGGAATGTTCAGACAGGTTCAAATATTGGCAGAGA +AAATGATAGCTGAAAACATTTTACAATTCTTTCCTGAAAGTCTTACAAGATATGGTGATCTAGAACTACA +AAAAATATTAGAATTGAAAGCAGGAATAAGTAACAAATCAAATCGCTACAATGATAATTACAACAATTAC +ATTAGTAAGTGCTCTATCATCACAGATCTCAGCAAATTCAATCAAGCATTTCGATATGAAACGTCATGTA +TTTGTAGTGATGTGCTGGATGAACTGCATGGTGTACAATCTCTATTTTCCTGGTTACATTTAACTATTCC +TCATGTCACAATAATATGCACATATAGGCATGCACCCCCCTATATAGGAGATCATATTGTAGATCTTAAC +AATGTAGATGAACAAAGTGGATTATATAGATATCACATGGGTGGCATCGAAGGGTGGTGTCAAAAACTGT +GGACCATAGAAGCTATATCACTATTGGATCTAATATCTCTCAAAGGGAAATTCTCAATTACTGCTTTAAT +TAATGGTGACAATCAATCAATAGATATAAGCAAACCAATCAGACTCATGGAAGGTCAAACTCATGCTCAA +GCAGATTATTTGCTAGCATTAAATAGCCTTAAATTACTGTATAAAGAGTATGCAGGCATAGGCCACAAAT +TAAAAGGAACTGAGACTTATATATCACGAGATATGCAATTTATGAGTAAAACAATTCAACATAACGGTGT +ATATTACCCAGCTAGTATAAAGAAAGTCCTAAGAGTGGGACCGTGGATAAACACTATACTTGATGATTTC +AAAGTGAGTCTAGAATCTATAGGTAGTTTGACACAAGAATTAGAATATAGAGGTGAAAGTCTATTATGCA +GTTTAATATTTAGAAATGTATGGTTATATAATCAGATTGCTCTACAATTAAAAAATCATGCATTATGTAA +CAATAAACTATATTTGGACATATTAAAGGTTCTGAAACACTTAAAAACCTTTTTTAATCTTGATAATATT +GATACAGCATTAACATTGTATATGAATTTACCCATGTTATTTGGTGGTGGTGATCCCAACTTGTTATATC +GAAGTTTCTATAGAAGAACTCCTGACTTCCTCACAGAGGCTATAGTTCACTCTGTGTTCATACTTAGTTA +TTATACAAACCATGACTTAAAAGATAAACTTCAAGATCTGTCAGATGATAGATTGAATAAGTTCTTAACA +TGCATAATCACGTTTGACAAAAACCCTAATGCTGAATTCGTAACATTGATGAGAGATCCTCAAGCTTTAG +GGTCTGAGAGACAAGCTAAAATTACTAGCGAAATCAATAGACTGGCAGTTACAGAGGTTTTGAGTACAGC +TCCAAACAAAATATTCTCCAAAAGTGCACAACATTATACTACTACAGAGATAGATCTAAATGATATTATG +CAAAATATAGAACCTACATATCCTCATGGGCTAAGAGTTGTTTATGAAAGTTTACCCTTTTATAAAGCAG +AGAAAATAGTAAATCTTATATCAGGTACAAAATCTATAACTAACATACTGGAAAAAACTTCTGCCATAGA +CTTAACAGATATTGATAGAGCCACTGAGATGATGAGGAAAAACATAACTTTGCTTATAAGGATACTTCCA +TTGGATTGTAACAGAGATAAAAGAGAGATATTGAGTATGGAAAACCTAAGTATTACTGAATTAAGCAAAT +ATGTTAGGGAAAGATCTTGGTCTTTATCCAATATAGTTGGTGTTACATCACCCAGTATCATGTATACAAT +GGACATCAAATATACTACAAGCACTATATCTAGTGGCATAATTATAGAGAAATATAATGTTAACAGTTTA +ACACGTGGTGAGAGAGGACCCACTAAACCATGGGTTGGTTCATCTACACAAGAGAAAAAAACAATGCCAG +TTTATAATAGACAAGTCTTAACCAAAAAACAGAGAGATCAAATAGATCTATTAGCAAAATTGGATTGGGT +GTATGCATCTATAGATAACAAGGATGAATTCATGGAAGAACTCAGCATAGGAACCCTTGGGTTAACATAT +GAAAAGGCCAAGAAATTATTTCCACAATATTTAAGTGTCAATTATTTGCATCGCCTTACAGTCAGTAGTA +GACCATGTGAATTCCCTGCATCAATACCAGCTTATAGAACAACAAATTATCACTTTGACACTAGCCCTAT +TAATCGCATATTAACAGAAAAGTATGGTGATGAAGATATTGACATAGTATTCCAAAACTGTATAAGCTTT +GGCCTTAGTTTAATGTCAGTAGTAGAACAATTTACTAATGTATGTCCTAACAGAATTATTCTCATACCTA +AGCTTAATGAGATACATTTGATGAAACCTCCCATATTCACAGGTGATGTTGATATTCACAAGTTAAAACA +AGTGATACAAAAACAGCATATGTTTTTACCAGACAAAATAAGTTTGACTCAATATGTGGAATTATTCTTA +AGTAATAAAACACTCAAATCTGGATCTCATGTTAATTCTAATTTAATATTGGCACATAAAATATCTGACT +ATTTTCATAATACTTACATTTTAAGTACTAATTTAGCTGGACATTGGATTCTGATTATACAACTTATGAA +AGATTCTAAAGGTATTTTTGAAAAAGATTGGGGAGAGGGATATATAACTGATCATATGTTTATTAATTTG +AAAGTTTTCTTCAATGCTTATAAGACCTATCTCTTGTGTTTTCATAAAGGTTATGGCAAAGCAAAGCTGG +AGTGTGATATGAACACTTCAGATCTTCTATGTGTATTGGAATTAATAGACAGTAGTTATTGGAAGTCTAT +GTCTAAGGTATTTTTAGAACAAAAAGTTATCAAATACATTCTTAGCCAAGATGCAAGTTTACATAGAGTA +AAAGGATGTCATAGCTTCAAATTATGGTTTCTTAAACGTCTTAATGTAGCAGAATTCACAGTTTGCCCTT +GGGTTGTTAACATAGATTATCATCCAACACATATGAAAGCAATATTAACTTATATAGATCTTGTTAGAAT +GGGATTGATAAATATAGATAGAATACACATTAAAAATAAACACAAATTCAATGATGAATTTTATACTTCT +AATCTCTTCTACATTAATTATAACTTCTCAGATAATACTCATCTATTAACTAAACATATAAGGATTGCTA +ATTCTGAATTAGAAAATAATTACAACAAATTATATCATCCTACACCAGAAACCCTAGAGAATATACTAGC +CAATCCGATTAAAAGTAATGACAAAAAGACACTGAATGACTATTGTATAGGTAAAAATGTTGACTCAATA +ATGTTACCATTGTTATCTAATAAGAAGCTTATTAAATCGTCTGCAATGATTAGAACCAATTACAGCAAAC +AAGATTTGTATAATTTATTCCCTATGGTTGTGATTGATAGAATTATAGATCATTCAGGCAATACAGCCAA +ATCCAACCAACTTTACACTACTACTTCCCACCAAATATCTTTAGTGCACAATAGCACATCACTTTACTGC +ATGCTTCCTTGGCATCATATTAATAGATTCAATTTTGTATTTAGTTCTACAGGTTGTAAAATTAGTATAG +AGTATATTTTAAAAGATCTTAAAATTAAAGATCCCAATTGTATAGCATTCATAGGTGAAGGAGCAGGGAA +TTTATTATTGCGTACAGTAGTGGAACTTCATCCTGACATAAGATATATTTACAGAAGTCTGAAAGATTGC +AATGATCATAGTTTACCTATTGAGTTTTTAAGGCTGTACAATGGACATATCAACATTGATTATGGTGAAA +ATTTGACCATTCCTGCTACAGATGCAACCAACAACATTCATTGGTCTTATTTACATATAAAGTTTGCTGA +ACCTATCAGTCTTTTTGTCTGTGATGCCGAATTGTCTGTAACAGTCAACTGGAGTAAAATTATAATAGAA +TGGAGCAAGCATGTAAGAAAGTGCAAGTACTGTTCCTCAGTTAATAAATGTATGTTAATAGTAAAATATC +ATGCTCAAGATGATATTGATTTCAAATTAGACAATATAACTATATTAAAAACTTATGTATGCTTAGGCAG +TAAGTTAAAGGGATCGGAGGTTTACTTAGTCCTTACAATAGGTCCTGCGAATATATTCCCAGTATTTAAT +GTAGTACAAAATGCTAAATTGATACTATCAAGAACCAAAAATTTCATCATGCCTAAGAAAGCTGATAAAG +AGTCTATTGATGCAAATATTAAAAGTTTGATACCCTTTCTTTGTTACCCTATAACAAAAAAAGGAATTAA +TACTGCATTGTCAAAACTAAAGAGTGTTGTTAGTGGAGATATACTATCATATTCTATAGCTGGACGTAAT +GAAGTTTTCAGCAATAAACTTATAAATCATAAGCATATGAACATCTTAAAATGGTTCAATCATGTTTTAA +ATTTCAGATCAACAGAACTAAACTATAACCATTTATATATGGTAGAATCTACATATCCTTACCTAAGTGA +ATTGTTAAACAGCTTGACAACCAATGAACTTAAAAAACTGATTAAAATCACAGGTAGTCTGTTATACAAC +TTTCATAATGAATAATGAATAAAGATCTTATAATAAAAATTCCCATAGCTATACACTAACACTGTATTCA +ATTATAGTTATTAAAAATTAAAAATCATATAATTTTTTAAATAACTTTTAGTGAACTAATCCTAAAGTTA +TCATTTTAATCTTGGAGGAATAAATTTAAACCCTAATCTAATTGGTTTATATGTGTATTAACTAAATTAC +GAGATATTAGTTTTTGACACTTTTTTTCTCGT + diff --git a/primerschemes/rsva-rsvb/1000/v1.0.0/work/ref.fasta b/primerschemes/rsva-rsvb/1000/v1.0.0/work/ref.fasta new file mode 100644 index 0000000..208d3a7 --- /dev/null +++ b/primerschemes/rsva-rsvb/1000/v1.0.0/work/ref.fasta @@ -0,0 +1,440 @@ +>NC_038235.1 Human orthopneumovirus Subgroup A, complete cds +ACGCGAAAAAATGCGTACAACAAACTTGCATAAACCAAAAAAATGGGGCAAATAAGAATTTGATAAGTAC +CACTTAAATTTAACTCCCTTGGTTAGAGATGGGCAGCAATTCATTGAGTATGATAAAAGTTAGATTACAA +AATTTGTTTGACAATGATGAAGTAGCATTGTTAAAAATAACATGCTATACTGATAAATTAATACATTTAA +CTAACGCTTTGGCTAAGGCAGTGATACATACAATCAAATTGAATGGCATTGTGTTTGTGCATGTTATTAC +AAGTAGTGATATTTGCCCTAATAATAATATTGTAGTAAAATCCAATTTCACAACAATGCCAGTACTACAA +AATGGAGGTTATATATGGGAAATGATGGAATTAACACATTGCTCTCAACCTAATGGTCTACTAGATGACA +ATTGTGAAATTAAATTCTCCAAAAAACTAAGTGATTCAACAATGACCAATTATATGAATCAATTATCTGA +ATTACTTGGATTTGATCTTAATCCATAAATTATAATTAATATCAACTAGCAAATCAATGTCACTAACACC +ATTAGTTAATATAAAACTTAACAGAAGACAAAAATGGGGCAAATAAATCAATTCAGCCAACCCAACCATG +GACACAACCCACAATGATAATACACCACAAAGACTGATGATCACAGACATGAGACCGTTGTCACTTGAGA +CCATAATAACATCACTAACCAGAGACATCATAACACACAAATTTATATACTTGATAAATCATGAATGCAT +AGTGAGAAAACTTGATGAAAAACAGGCCACATTTACATTCCTGGTCAACTATGAAATGAAACTATTACAC +AAAGTAGGAAGCACTAAATATAAAAAATATACTGAATACAACACAAAATATGGCACTTTCCCTATGCCAA +TATTCATCAATCATGATGGGTTCTTAGAATGCATTGGCATTAAGCCTACAAAGCATACTCCCATAATATA +CAAGTATGATCTCAATCCATAAATTTCAACACAATATTCACACAATCTAAAACAACAACTCTATGCATAA +CTATACTCCATAGTCCAGATGGAGCCTGAAAATTATAGTAATTTAAAATTAAGGAGAGATATAAGATAGA +AGATGGGGCAAATACAAAGATGGCTCTTAGCAAAGTCAAGTTGAATGATACACTCAACAAAGATCAACTT +CTGTCATCCAGCAAATACACCATCCAACGGAGCACAGGAGATAGTATTGATACTCCTAATTATGATGTGC +AGAAACACATCAATAAGTTATGTGGCATGTTATTAATCACAGAAGATGCTAATCATAAATTCACTGGGTT +AATAGGTATGTTATATGCGATGTCTAGGTTAGGAAGAGAAGACACCATAAAAATACTCAGAGATGCGGGA +TATCATGTAAAAGCAAATGGAGTAGATGTAACAACACATCGTCAAGACATTAATGGAAAAGAAATGAAAT +TTGAAGTGTTAACATTGGCAAGCTTAACAACTGAAATTCAAATCAACATTGAGATAGAATCTAGAAAATC +CTACAAAAAAATGCTAAAAGAAATGGGAGAGGTAGCTCCAGAATACAGGCATGACTCTCCTGATTGTGGG +ATGATAATATTATGTATAGCAGCATTAGTAATAACTAAATTAGCAGCAGGGGACAGATCTGGTCTTACAG +CCGTGATTAGGAGAGCTAATAATGTCCTAAAAAATGAAATGAAACGTTACAAAGGCTTACTACCCAAGGA +CATAGCCAACAGCTTCTATGAAGTGTTTGAAAAACATCCCCACTTTATAGATGTTTTTGTTCATTTTGGT +ATAGCACAATCTTCTACCAGAGGTGGCAGTAGAGTTGAAGGGATTTTTGCAGGATTGTTTATGAATGCCT +ATGGTGCAGGGCAAGTGATGTTACGGTGGGGAGTCTTAGCAAAATCAGTTAAAAATATTATGTTAGGACA +TGCTAGTGTGCAAGCAGAAATGGAACAAGTTGTTGAGGTTTATGAATATGCCCAAAAATTGGGTGGTGAA +GCAGGATTCTACCATATATTGAACAACCCAAAAGCATCATTATTATCTTTGACTCAATTTCCTCACTTCT +CCAGTGTAGTATTAGGCAATGCTGCTGGCCTAGGCATAATGGGAGAGTACAGAGGTACACCGAGGAATCA +AGATCTATATGATGCAGCAAAGGCATATGCTGAACAACTCAAAGAAAATGGTGTGATTAACTACAGTGTA +CTAGACTTGACAGCAGAAGAACTAGAGGCTATCAAACATCAGCTTAATCCAAAAGATAATGATGTAGAGC +TTTGAGTTAATAAAAAATGGGGCAAATAAATCATCATGGAAAAGTTTGCTCCTGAATTCCATGGAGAAGA +TGCAAACAACAGGGCTACTAAATTCCTAGAATCAATAAAGGGCAAATTCACATCACCCAAAGATCCCAAG +AAAAAAGATAGTATCATATCTGTCAACTCAATAGATATAGAAGTAACCAAAGAAAGCCCTATAACATCAA +ATTCAACTATTATCAACCCAACAAATGAGACAGATGATACTGCAGGGAACAAGCCCAATTATCAAAGAAA +ACCTCTAGTAAGTTTCAAAGAAGACCCTACACCAAGTGATAATCCCTTTTCTAAACTATACAAAGAAACC +ATAGAAACATTTGATAACAATGAAGAAGAATCCAGCTATTCATACGAAGAAATAAATGATCAGACAAACG +ATAATATAACAGCAAGATTAGATAGGATTGATGAAAAATTAAGTGAAATACTAGGAATGCTTCACACATT +AGTAGTGGCAAGTGCAGGACCTACATCTGCTCGGGATGGTATAAGAGATGCCATGATTGGTTTAAGAGAA +GAAATGATAGAAAAAATCAGAACTGAAGCATTAATGACCAATGACAGATTAGAAGCTATGGCAAGACTCA +GGAATGAGGAAAGTGAAAAGATGGCAAAAGACACATCAGATGAAGTGTCTCTCAATCCAACATCAGAGAA +ATTGAACAACCTATTGGAAGGGAATGATAGTGACAATGATCTATCACTTGAAGATTTCTGATTAGTTACC +ACTCTTCACATCAACACACAATACCAACAGAAGACCAACAAACTAACCAACCCAATCATCCAACCAAACA +TCCATCCGCCAATCAGCCAAACAGCCAACAAAACAACCAGCCAATCCAAAACTAACCACCCGGAAAAAAT +CTATAATATAGTTACAAAAAAAGGAAAGGGTGGGGCAAATATGGAAACATACGTGAACAAGCTTCACGAA +GGCTCCACATACACAGCTGCTGTTCAATACAATGTCTTAGAAAAAGACGATGACCCTGCATCACTTACAA +TATGGGTGCCCATGTTCCAATCATCTATGCCAGCAGATTTACTTATAAAAGAACTAGCTAATGTCAACAT +ACTAGTGAAACAAATATCCACACCCAAGGGACCTTCACTAAGAGTCATGATAAACTCAAGAAGTGCAGTG +CTAGCACAAATGCCCAGCAAATTTACCATATGCGCTAATGTGTCCTTGGATGAAAGAAGCAAACTAGCAT +ATGATGTAACCACACCCTGTGAAATCAAGGCATGTAGTCTAACATGCCTAAAATCAAAAAATATGTTGAC +TACAGTTAAAGATCTCACTATGAAGACACTCAACCCTACACATGATATTATTGCTTTATGTGAATTTGAA +AACATAGTAACATCAAAAAAAGTCATAATACCAACATACCTAAGATCCATCAGTGTCAGAAATAAAGATC +TGAACACACTTGAAAATATAACAACCACTGAATTCAAAAATGCTATCACAAATGCAAAAATCATCCCTTA +CTCAGGATTACTATTAGTCATCACAGTGACTGACAACAAAGGAGCATTCAAATACATAAAGCCACAAAGT +CAATTCATAGTAGATCTTGGAGCTTACCTAGAAAAAGAAAGTATATATTATGTTACCACAAATTGGAAGC +ACACAGCTACACGATTTGCAATCAAACCCATGGAAGATTAACCTTTTTCCTCTACATCAGTGTGTTAATT +CATACAAACTTTCTACCTACATTCTTCACTTCACCATCACAATCACAAACACTCTGTGGTTCAACCAATC +AAACAAAACTTATCTGAAGTCCCAGATCATCCCAAGTCATTGTTTATCAGATCTAGTACTCAAATAAGTT +AATAAAAAATATACACATGGGGCAAATAATCATTGGAGGAAATCCAACTAATCACAATATCTGTTAACAT +AGACAAGTCCACACACCATACAGAATCAACCAATGGAAAATACATCCATAACAATAGAATTCTCAAGCAA +ATTCTGGCCTTACTTTACACTAATACACATGATCACAACAATAATCTCTTTGCTAATCATAATCTCCATC +ATGATTGCAATACTAAACAAACTTTGTGAATATAACGTATTCCATAACAAAACCTTTGAGTTACCAAGAG +CTCGAGTCAACACATAGCATTCATCAATCCAACAGCCCAAAACAGTAACCTTGCATTTAAAAATGAACAA +CCCCTACCTCTTTACAACACCTCATTAACATCCCACCATGCAAACCACTATCCATACTATAAAGTAGTTA +ATTAAAAATAGTCATAACAATGAACTAGGATATCAAGACTAACAATAACATTGGGGCAAATGCAAACATG +TCCAAAAACAAGGACCAACGCACCGCTAAGACATTAGAAAGGACCTGGGACACTCTCAATCATTTATTAT +TCATATCATCGTGCTTATATAAGTTAAATCTTAAATCTGTAGCACAAATCACATTATCCATTCTGGCAAT +GATAATCTCAACTTCACTTATAATTGCAGCCATCATATTCATAGCCTCGGCAAACCACAAAGTCACACCA +ACAACTGCAATCATACAAGATGCAACAAGCCAGATCAAGAACACAACCCCAACATACCTCACCCAGAATC +CTCAGCTTGGAATCAGTCCCTCTAATCCGTCTGAAATTACATCACAAATCACCACCATACTAGCTTCAAC +AACACCAGGAGTCAAGTCAACCCTGCAATCCACAACAGTCAAGACCAAAAACACAACAACAACTCAAACA +CAACCCAGCAAGCCCACCACAAAACAACGCCAAAACAAACCACCAAGCAAACCCAATAATGATTTTCACT +TTGAAGTGTTCAACTTTGTACCCTGCAGCATATGCAGCAACAATCCAACCTGCTGGGCTATCTGCAAAAG +AATACCAAACAAAAAACCAGGAAAGAAAACCACTACCAAGCCCACAAAAAAACCAACCCTCAAGACAACC +AAAAAAGATCCCAAACCTCAAACCACTAAATCAAAGGAAGTACCCACCACCAAGCCCACAGAAGAGCCAA +CCATCAACACCACCAAAACAAACATCATAACTACACTACTCACCTCCAACACCACAGGAAATCCAGAACT +CACAAGTCAAATGGAAACCTTCCACTCAACTTCCTCCGAAGGCAATCCAAGCCCTTCTCAAGTCTCTACA +ACATCCGAGTACCCATCACAACCTTCATCTCCACCCAACACACCACGCCAGTAGTTACTTAAAAACATAT +TATCACAAAAAGCCATGACCAACTTAAACAGAATCAAAATAAACTCTGGGGCAAATAACAATGGAGTTGC +TAATCCTCAAAGCAAATGCAATTACCACAATCCTCACTGCAGTCACATTTTGTTTTGCTTCTGGTCAAAA +CATCACTGAAGAATTTTATCAATCAACATGCAGTGCAGTTAGCAAAGGCTATCTTAGTGCTCTGAGAACT +GGTTGGTATACCAGTGTTATAACTATAGAATTAAGTAATATCAAGGAAAATAAGTGTAATGGAACAGATG +CTAAGGTAAAATTGATAAAACAAGAATTAGATAAATATAAAAATGCTGTAACAGAATTGCAGTTGCTCAT +GCAAAGCACACCACCAACAAACAATCGAGCCAGAAGAGAACTACCAAGGTTTATGAATTATACACTCAAC +AATGCCAAAAAAACCAATGTAACATTAAGCAAGAAAAGGAAAAGAAGATTTCTTGTTTTTTTGTTAGGTG +TTGGATCTGCAATCGCCAGTGGCGTTGCTGTATCTAAGGTCCTGCACCTAGAAGGGGAAGTGAACAAGAT +CAAAAGTGCTCTACTATCCACAAACAAGGCTCTAGTCAGCTTATCAAATGGAGTTAGTGTCTTAACCAGC +AAAGTGTTAGACCTCAAAAACTATATAGATAAACAATTGTTACCTATTGTGAACAAGCAAAGCTGCAGCA +TATCAAATATAGAAACTGTGATAGAGTTCCAACAAAAGAACAACAGACTACTAGAGATTACCAGGGAATT +TAGTGTTAATGCAGGTGTAACTACACCTGTAAGCACTTACATGTTAACTAATAGTGAATTATTGTCATTA +ATCAATGATATGCCTATAACAAATGATCAGAAAAAGTTAATGTCCAACAATGTTCAAATAGTTAGACAGC +AAAGTTACTCTATCATGTCCATAATAAAAGAGGAAGTCTTAGCATATGTAGTACAATTACCACTATATGG +TGTTATAGATACACCCTGTTGGAAACTACACACATCCCCTCTATGTACAACCAACACAAAAGAAGGGTCC +AACATCTGTTTAACAAGAACTGACAGAGGATGGTACTGTGACAATGCAGGATCAGTATCTTTCTTCCCAC +AAGCTGAAACATGTAAAGTTCAATCAAATCGAGTATTTTGTGACACAATGAACAGTTTAACATTACCAAG +TGAAATAAATCTCTGCAATGTTGACATATTCAACCCCAAATATGATTGTAAAATTATGACTTCAAAAACA +GATGTAAGCAGCTCCGTTATCACATCTCTAGGAGCCATTGTGTCATGCTATGGCAAAACTAAATGTACAG +CATCCAATAAAAATCGTGGAATCATAAAGACATTTTCTAACGGGTGCGATTATGTATCAAATAAAGGGAT +GGACACTGTGTCTGTAGGTAACACATTATATTATGTAAATAAGCAAGAAGGTAAAAGTCTCTATGTAAAA +GGTGAACCAATAATAAATTTCTATGACCCATTAGTATTCCCCTCTGATGAATTTGATGCATCAATATCTC +AAGTCAACGAGAAGATTAACCAGAGCCTAGCATTTATTCGTAAATCCGATGAATTATTACATAATGTAAA +TGCTGGTAAATCCACCACAAATATCATGATAACTACTATAATTATAGTGATTATAGTAATATTGTTATCA +TTAATTGCTGTTGGACTGCTCTTATACTGTAAGGCCAGAAGCACACCAGTCACACTAAGCAAAGATCAAC +TGAGTGGTATAAATAATATTGCATTTAGTAACTAAATAAAAATAGCACCTAATCATGTTCTTACAATGGT +TTACTATCTGCTCATAGACAACCCATCTGTCATTGGATTTTCTTAAAATCTGAACTTCATCGAAACTCTC +ATCTATAAACCATCTCACTTACACTATTTAAGTAGATTCCTAGTTTATAGTTATATAAAACACAATTGAA +TGCCAGATTAACTTACCATCTGTAAAAATGAAAACTGGGGCAAATATGTCACGAAGGAATCCTTGCAAAT +TTGAAATTCGAGGTCATTGCTTAAATGGTAAGAGGTGTCATTTTAGTCATAATTATTTTGAATGGCCACC +CCATGCACTGCTTGTAAGACAAAACTTTATGTTAAACAGAATACTTAAGTCTATGGATAAAAGTATAGAT +ACCTTATCAGAAATAAGTGGAGCTGCAGAGTTGGACAGAACAGAAGAGTATGCTCTTGGTGTAGTTGGAG +TGCTAGAGAGTTATATAGGATCAATAAACAATATAACTAAACAATCAGCATGTGTTGCCATGAGCAAACT +CCTCACTGAACTCAATAGTGATGATATCAAAAAGCTGAGGGACAATGAAGAGCTAAATTCACCCAAGATA +AGAGTGTACAATACTGTCATATCATATATTGAAAGCAACAGGAAAAACAATAAACAAACTATCCATCTGT +TAAAAAGATTGCCAGCAGACGTATTGAAGAAAACCATCAAAAACACATTGGATATCCATAAGAGCATAAC +CATCAACAACCCAAAAGAATCAACTGTTAGTGATACAAATGACCATGCCAAAAATAATGATACTACCTGA +CAAATATCCTTGTAGTATAACTTCCATACTAATAACAAGTAGATGTAGAGTTACTATGTATAATCAAAAG +AACACACTATATTTCAATCAAAACAACCCAAATAACCATATGTACTCACCGAATCAAACATTCAATGAAA +TCCATTGGACCTCTCAAGAATTGATTGACACAATTCAAATTTTTCTACAACATCTAGGTATTATTGAGGA +TATATATACAATATATATATTAGTGTCATAACACTCAATTCTAACACTCACCACATCGTTACATTATTAA +TTCAAACAATTCAAGTTGTGGGACAAAATGGATCCCATTATTAATGGAAATTCTGCTAATGTTTATCTAA +CCGATAGTTATTTAAAAGGTGTTATCTCTTTCTCAGAGTGTAATGCTTTAGGAAGTTACATATTCAATGG +TCCTTATCTCAAAAATGATTATACCAACTTAATTAGTAGACAAAATCCATTAATAGAACACATGAATCTA +AAGAAACTAAATATAACACAGTCCTTAATATCTAAGTATCATAAAGGTGAAATAAAATTAGAAGAACCTA +CTTATTTTCAGTCATTACTTATGACATACAAGAGTATGACCTCGTCAGAACAGATTGCTACCACTAATTT +ACTTAAAAAGATAATAAGAAGAGCTATAGAAATAAGTGATGTCAAAGTCTATGCTATATTGAATAAACTA +GGGCTTAAAGAAAAGGACAAGATTAAATCCAACAATGGACAAGATGAAGACAACTCAGTTATTACGACCA +TAATCAAAGATGATATACTTTCAGCTGTTAAAGATAATCAATCTCATCTTAAAGCAGACAAAAATCACTC +TACAAAACAAAAAGACACAATCAAAACAACACTCTTGAAGAAATTGATGTGTTCAATGCAACATCCTCCA +TCATGGTTAATACATTGGTTTAACTTATACACAAAATTAAACAACATATTAACACAGTATCGATCAAATG +AGGTAAAAAACCATGGGTTTACATTGATAGATAATCAAACTCTTAGTGGATTTCAATTTATTTTGAACCA +ATATGGTTGTATAGTTTATCATAAGGAACTCAAAAGAATTACTGTGACAACCTATAATCAATTCTTGACA +TGGAAAGATATTAGCCTTAGTAGATTAAATGTTTGTTTAATTACATGGATTAGTAACTGCTTGAACACAT +TAAATAAAAGCTTAGGCTTAAGATGCGGATTCAATAATGTTATCTTGACACAACTATTCCTTTATGGAGA +TTGTATACTAAAGCTATTTCACAATGAGGGGTTCTACATAATAAAAGAGGTAGAGGGATTTATTATGTCT +CTAATTTTAAATATAACAGAAGAAGATCAATTCAGAAAACGATTTTATAATAGTATGCTCAACAACATCA +CAGATGCTGCTAATAAAGCTCAGAAAAATCTGCTATCAAGAGTATGTCATACATTATTAGATAAGACAGT +GTCCGATAATATAATAAATGGCAGATGGATAATTCTATTAAGTAAGTTCCTTAAATTAATTAAGCTTGCA +GGTGACAATAACCTTAACAATCTGAGTGAACTATATTTTTTGTTCAGAATATTTGGACACCCAATGGTAG +ATGAAAGACAAGCCATGGATGCTGTTAAAATTAATTGCAATGAGACCAAATTTTACTTGTTAAGCAGTCT +GAGTATGTTAAGAGGTGCCTTTATATATAGAATTATAAAAGGGTTTGTAAATAATTACAACAGATGGCCT +ACTTTAAGAAATGCTATTGTTTTACCCTTAAGATGGTTAACTTACTATAAACTAAACACTTATCCTTCTT +TGTTGGAACTTACAGAAAGAGATTTGATTGTGTTATCAGGACTACGTTTCTATCGTGAGTTTCGGTTGCC +TAAAAAAGTGGATCTTGAAATGATTATAAATGATAAAGCTATATCACCTCCTAAAAATTTGATATGGACT +AGTTTCCCTAGAAATTACATGCCATCACACATACAAAACTATATAGAACATGAAAAATTAAAATTTTCCG +AGAGTGATAAATCAAGAAGAGTATTAGAGTATTATTTAAGAGATAACAAATTCAATGAATGTGATTTATA +CAACTGTGTAGTTAATCAAAGTTATCTCAACAACCCTAATCATGTGGTATCATTGACAGGCAAAGAAAGA +GAACTCAGTGTAGGTAGAATGTTTGCAATGCAACCGGGAATGTTCAGACAGGTTCAAATATTGGCAGAGA +AAATGATAGCTGAAAACATTTTACAATTCTTTCCTGAAAGTCTTACAAGATATGGTGATCTAGAACTACA +AAAAATATTAGAATTGAAAGCAGGAATAAGTAACAAATCAAATCGCTACAATGATAATTACAACAATTAC +ATTAGTAAGTGCTCTATCATCACAGATCTCAGCAAATTCAATCAAGCATTTCGATATGAAACGTCATGTA +TTTGTAGTGATGTGCTGGATGAACTGCATGGTGTACAATCTCTATTTTCCTGGTTACATTTAACTATTCC +TCATGTCACAATAATATGCACATATAGGCATGCACCCCCCTATATAGGAGATCATATTGTAGATCTTAAC +AATGTAGATGAACAAAGTGGATTATATAGATATCACATGGGTGGCATCGAAGGGTGGTGTCAAAAACTGT +GGACCATAGAAGCTATATCACTATTGGATCTAATATCTCTCAAAGGGAAATTCTCAATTACTGCTTTAAT +TAATGGTGACAATCAATCAATAGATATAAGCAAACCAATCAGACTCATGGAAGGTCAAACTCATGCTCAA +GCAGATTATTTGCTAGCATTAAATAGCCTTAAATTACTGTATAAAGAGTATGCAGGCATAGGCCACAAAT +TAAAAGGAACTGAGACTTATATATCACGAGATATGCAATTTATGAGTAAAACAATTCAACATAACGGTGT +ATATTACCCAGCTAGTATAAAGAAAGTCCTAAGAGTGGGACCGTGGATAAACACTATACTTGATGATTTC +AAAGTGAGTCTAGAATCTATAGGTAGTTTGACACAAGAATTAGAATATAGAGGTGAAAGTCTATTATGCA +GTTTAATATTTAGAAATGTATGGTTATATAATCAGATTGCTCTACAATTAAAAAATCATGCATTATGTAA +CAATAAACTATATTTGGACATATTAAAGGTTCTGAAACACTTAAAAACCTTTTTTAATCTTGATAATATT +GATACAGCATTAACATTGTATATGAATTTACCCATGTTATTTGGTGGTGGTGATCCCAACTTGTTATATC +GAAGTTTCTATAGAAGAACTCCTGACTTCCTCACAGAGGCTATAGTTCACTCTGTGTTCATACTTAGTTA +TTATACAAACCATGACTTAAAAGATAAACTTCAAGATCTGTCAGATGATAGATTGAATAAGTTCTTAACA +TGCATAATCACGTTTGACAAAAACCCTAATGCTGAATTCGTAACATTGATGAGAGATCCTCAAGCTTTAG +GGTCTGAGAGACAAGCTAAAATTACTAGCGAAATCAATAGACTGGCAGTTACAGAGGTTTTGAGTACAGC +TCCAAACAAAATATTCTCCAAAAGTGCACAACATTATACTACTACAGAGATAGATCTAAATGATATTATG +CAAAATATAGAACCTACATATCCTCATGGGCTAAGAGTTGTTTATGAAAGTTTACCCTTTTATAAAGCAG +AGAAAATAGTAAATCTTATATCAGGTACAAAATCTATAACTAACATACTGGAAAAAACTTCTGCCATAGA +CTTAACAGATATTGATAGAGCCACTGAGATGATGAGGAAAAACATAACTTTGCTTATAAGGATACTTCCA +TTGGATTGTAACAGAGATAAAAGAGAGATATTGAGTATGGAAAACCTAAGTATTACTGAATTAAGCAAAT +ATGTTAGGGAAAGATCTTGGTCTTTATCCAATATAGTTGGTGTTACATCACCCAGTATCATGTATACAAT +GGACATCAAATATACTACAAGCACTATATCTAGTGGCATAATTATAGAGAAATATAATGTTAACAGTTTA +ACACGTGGTGAGAGAGGACCCACTAAACCATGGGTTGGTTCATCTACACAAGAGAAAAAAACAATGCCAG +TTTATAATAGACAAGTCTTAACCAAAAAACAGAGAGATCAAATAGATCTATTAGCAAAATTGGATTGGGT +GTATGCATCTATAGATAACAAGGATGAATTCATGGAAGAACTCAGCATAGGAACCCTTGGGTTAACATAT +GAAAAGGCCAAGAAATTATTTCCACAATATTTAAGTGTCAATTATTTGCATCGCCTTACAGTCAGTAGTA +GACCATGTGAATTCCCTGCATCAATACCAGCTTATAGAACAACAAATTATCACTTTGACACTAGCCCTAT +TAATCGCATATTAACAGAAAAGTATGGTGATGAAGATATTGACATAGTATTCCAAAACTGTATAAGCTTT +GGCCTTAGTTTAATGTCAGTAGTAGAACAATTTACTAATGTATGTCCTAACAGAATTATTCTCATACCTA +AGCTTAATGAGATACATTTGATGAAACCTCCCATATTCACAGGTGATGTTGATATTCACAAGTTAAAACA +AGTGATACAAAAACAGCATATGTTTTTACCAGACAAAATAAGTTTGACTCAATATGTGGAATTATTCTTA +AGTAATAAAACACTCAAATCTGGATCTCATGTTAATTCTAATTTAATATTGGCACATAAAATATCTGACT +ATTTTCATAATACTTACATTTTAAGTACTAATTTAGCTGGACATTGGATTCTGATTATACAACTTATGAA +AGATTCTAAAGGTATTTTTGAAAAAGATTGGGGAGAGGGATATATAACTGATCATATGTTTATTAATTTG +AAAGTTTTCTTCAATGCTTATAAGACCTATCTCTTGTGTTTTCATAAAGGTTATGGCAAAGCAAAGCTGG +AGTGTGATATGAACACTTCAGATCTTCTATGTGTATTGGAATTAATAGACAGTAGTTATTGGAAGTCTAT +GTCTAAGGTATTTTTAGAACAAAAAGTTATCAAATACATTCTTAGCCAAGATGCAAGTTTACATAGAGTA +AAAGGATGTCATAGCTTCAAATTATGGTTTCTTAAACGTCTTAATGTAGCAGAATTCACAGTTTGCCCTT +GGGTTGTTAACATAGATTATCATCCAACACATATGAAAGCAATATTAACTTATATAGATCTTGTTAGAAT +GGGATTGATAAATATAGATAGAATACACATTAAAAATAAACACAAATTCAATGATGAATTTTATACTTCT +AATCTCTTCTACATTAATTATAACTTCTCAGATAATACTCATCTATTAACTAAACATATAAGGATTGCTA +ATTCTGAATTAGAAAATAATTACAACAAATTATATCATCCTACACCAGAAACCCTAGAGAATATACTAGC +CAATCCGATTAAAAGTAATGACAAAAAGACACTGAATGACTATTGTATAGGTAAAAATGTTGACTCAATA +ATGTTACCATTGTTATCTAATAAGAAGCTTATTAAATCGTCTGCAATGATTAGAACCAATTACAGCAAAC +AAGATTTGTATAATTTATTCCCTATGGTTGTGATTGATAGAATTATAGATCATTCAGGCAATACAGCCAA +ATCCAACCAACTTTACACTACTACTTCCCACCAAATATCTTTAGTGCACAATAGCACATCACTTTACTGC +ATGCTTCCTTGGCATCATATTAATAGATTCAATTTTGTATTTAGTTCTACAGGTTGTAAAATTAGTATAG +AGTATATTTTAAAAGATCTTAAAATTAAAGATCCCAATTGTATAGCATTCATAGGTGAAGGAGCAGGGAA +TTTATTATTGCGTACAGTAGTGGAACTTCATCCTGACATAAGATATATTTACAGAAGTCTGAAAGATTGC +AATGATCATAGTTTACCTATTGAGTTTTTAAGGCTGTACAATGGACATATCAACATTGATTATGGTGAAA +ATTTGACCATTCCTGCTACAGATGCAACCAACAACATTCATTGGTCTTATTTACATATAAAGTTTGCTGA +ACCTATCAGTCTTTTTGTCTGTGATGCCGAATTGTCTGTAACAGTCAACTGGAGTAAAATTATAATAGAA +TGGAGCAAGCATGTAAGAAAGTGCAAGTACTGTTCCTCAGTTAATAAATGTATGTTAATAGTAAAATATC +ATGCTCAAGATGATATTGATTTCAAATTAGACAATATAACTATATTAAAAACTTATGTATGCTTAGGCAG +TAAGTTAAAGGGATCGGAGGTTTACTTAGTCCTTACAATAGGTCCTGCGAATATATTCCCAGTATTTAAT +GTAGTACAAAATGCTAAATTGATACTATCAAGAACCAAAAATTTCATCATGCCTAAGAAAGCTGATAAAG +AGTCTATTGATGCAAATATTAAAAGTTTGATACCCTTTCTTTGTTACCCTATAACAAAAAAAGGAATTAA +TACTGCATTGTCAAAACTAAAGAGTGTTGTTAGTGGAGATATACTATCATATTCTATAGCTGGACGTAAT +GAAGTTTTCAGCAATAAACTTATAAATCATAAGCATATGAACATCTTAAAATGGTTCAATCATGTTTTAA +ATTTCAGATCAACAGAACTAAACTATAACCATTTATATATGGTAGAATCTACATATCCTTACCTAAGTGA +ATTGTTAAACAGCTTGACAACCAATGAACTTAAAAAACTGATTAAAATCACAGGTAGTCTGTTATACAAC +TTTCATAATGAATAATGAATAAAGATCTTATAATAAAAATTCCCATAGCTATACACTAACACTGTATTCA +ATTATAGTTATTAAAAATTAAAAATCATATAATTTTTTAAATAACTTTTAGTGAACTAATCCTAAAGTTA +TCATTTTAATCTTGGAGGAATAAATTTAAACCCTAATCTAATTGGTTTATATGTGTATTAACTAAATTAC +GAGATATTAGTTTTTGACACTTTTTTTCTCGT + +>NC_001781.1 Human orthopneumovirus Subgroup B, complete genome +ACGCGAAAAAATGCGTACTACAAACTTGCACATTCGGAAAAAATGGGGCAAATAAGAATTTGATAAGTGC +TATTTAAGTCTAACCTTTTCAATCAGAAATGGGGTGCAATTCACTGAGCATGATAAAGGTTAGATTACAA +AATTTATTTGACAATGACGAAGTAGCATTGTTAAAAATAACATGTTATACTGACAAATTAATTCTTCTGA +CCAATGCATTAGCCAAAGCAGCAATACATACAATTAAATTAAACGGTATAGTTTTTATACATGTTATAAC +AAGCAGTGAAGTGTGCCCTGATAACAACATTGTAGTAAAATCTAACTTTACAACAATGCCAATATTACAA +AACGGAGGATACATATGGGAATTGATTGAGTTGACACACTGCTCTCAATTAAACGGTCTAATGGATGATA +ATTGTGAAATCAAATTTTCTAAAAGACTAAGTGACTCAGTAATGACTAATTATATGAATCAAATATCTGA +TTTACTTGGGCTTGATCTCAATTCATGAATTATGTTTAGTCTAACTCAATAGACATGTGTTTATTACCAT +TTTAGTTAATATAAAAACTCATCAAAGGGAAATGGGGCAAATAAACTCACCTAATCAATCAAACTATGAG +CACTACAAATGACAACACTACTATGCAAAGATTAATGATCACGGACATGAGACCCCTGTCGATGGATTCA +ATAATAACATCTCTCACCAAAGAAATCATCACACACAAATTCATATACTTGATAAACAATGAATGTATTG +TAAGAAAACTTGATGAAAGACAAGCTACATTTACATTCTTAGTCAATTATGAGATGAAGCTACTGCACAA +AGTAGGGAGTACCAAATACAAGAAATACACTGAATATAATACAAAATATGGCACTTTCCCCATGCCTATA +TTTATCAATCATGGCGGGTTTCTAGAATGTATTGGCATTAAGCCTACAAAACACACTCCTATAATATACA +AATATGACCTCAACCCGTAAATTCCAACAAAAAAAACCAACCCAACCAAACCAAGCTATTCCTCAAACAA +CAATGCTCAATAGTTAAGAAGGAGCTAATCCGTTTTAGTAATTAAAAATAAAAGTAAAGCCAATAACATA +AATTGGGGCAAATACAAAGATGGCTCTTAGCAAAGTCAAGTTAAATGATACATTAAATAAGGATCAGCTG +CTGTCATCCAGCAAATACACTATTCAACGTAGTACAGGAGATAATATTGACACTCCCAATTATGATGTGC +AAAAACACCTAAACAAACTATGTGGTATGCTATTAATCACTGAAGATGCAAATCATAAATTCACAGGATT +AATAGGTATGTTATATGCTATGTCCAGGTTAGGAAGGGAAGACACTATAAAGATACTTAAAGATGCTGGA +TATCATGTTAAAGCTAATGGAGTAGATATAACAACATATCGTCAAGATATAAATGGAAAGGAAATGAAAT +TCGAAGTATTAACATTATCAAGCTTGACATCAGAAATACAAGTCAATATTGAGATAGAATCTAGAAAATC +CTACAAAAAAATGCTAAAAGAGATGGGAGAAGTGGCTCCAGAATATAGGCATGATTCTCCAGACTGTGGG +ATGATAATACTGTGTATAGCAGCACTTGTAATAACCAAATTAGCAGCAGGAGACAGATCAGGTCTTACAG +CAGTAATTAGGAGGGCAAACAATGTCTTAAAAAATGAAATAAAACGCTACAAGGGTCTCATACCAAAGGA +TATAGCTAACAGTTTTTATGAAGTGTTTGAAAAACACCCTCATCTTATAGATGTTTTTGTGCACTTTGGC +ATTGCACAATCATCAACAAGAGGGGGTAGTAGAGTTGAAGGAATCTTTGCAGGATTGTTTATGAATGCCT +ATGGTTCAGGGCAAGTAATGCTAAGATGGGGAGTTTTAGCCAAATCTGTAAAAAATATCATGCTAGGTCA +TGCTAGTGTCCAGGCAGAAATGGAGCAAGTTGTGGAAGTCTATGAGTATGCACAGAAGTTGGGAGGAGAA +GCTGGATTCTACCATATATTGAACAATCCAAAAGCATCATTGCTGTCATTAACTCAATTTCCTAACTTCT +CAAGTGTGGTCCTAGGCAATGCAGCAGGTCTAGGCATAATGGGAGAGTATAGAGGTACGCCAAGAAACCA +GGATCTTTATGATGCAGCCAAAGCATATGCAGAGCAACTCAAAGAAAATGGAGTAATAAACTACAGTGTA +TTAGACTTAACAGCAGAAGAATTGGAAGCCATAAAGAATCAACTCAACCCTAAAGAAGATGATGTAGAGC +TTTAAGTTAACAAAAAATACGGGGCAAATAAGTCAACATGGAGAAGTTTGCACCTGAATTTCATGGAGAA +GATGCAAATAACAAAGCTACCAAATTCCTAGAATCAATAAAGGGCAAGTTCGCATCATCCAAAGATCCTA +AGAAGAAAGATAGCATAATATCTGTTAACTCAATAGATATAGAAGTAACCAAAGAGAGCCCGATAACATC +TGGCACCAACATCATCAATCCAACAAGTGAAGCCGACAGTACCCCAGAAACCAAAGCCAACTACCCAAGA +AAACCCCTAGTAAGCTTCAAAGAAGATCTCACCCCAAGTGACAACCCTTTTTCTAAGTTGTACAAAGAAA +CAATAGAAACATTTGATAACAATGAAGAAGAATCTAGCTACTCATATGAAGAGATAAATGATCAAACAAA +TGACAACATTACAGCAAGACTAGATAGAATTGATGAAAAATTAAGTGAAATATTAGGAATGCTCCATACA +TTAGTAGTTGCAAGTGCAGGACCCACTTCAGCTCGCGATGGAATAAGAGATGCTATGGTTGGTCTGAGAG +AAGAAATGATAGAAAAAATAAGAGCGGAAGCATTAATGACCAATGATAGGTTAGAGGCTATGGCAAGACT +TAGGAATGAGGAAAGCGAAAAAATGGCAAAAGACACCTCAGATGAAGTGCCTCTTAATCCAACTTCCAAA +AAATTGAGTGACTTGTTGGAAGACAACGATAGTGACAATGATCTGTCACTTGATGATTTTTGATCAGTGA +TCAACTCACTCAGCAATCAACAACATCAATAAAACAGACATCAATCCATTGAATCAACTGCCAGACCGAA +CAAACAAATGTCCGTCAGCGGAACCACCAACCAATCAATCAACCAACTGATCCATCAGCAACCTGACGAA +ATTAACAATATAGTAACAAAAAAAGAACAAGATGGGGCAAATATGGAAACATACGTGAACAAGCTTCACG +AAGGCTCCACATACACAGCAGCTGTTCAGTACAATGTTCTAGAAAAAGATGATGATCCTGCATCACTAAC +AATATGGGTGCCTATGTTCCAGTCATCTGTACCAGCAGACTTGCTCATAAAAGAACTTGCAAGCATCAAC +ATACTAGTGAAGCAGATCTCTACGCCCAAAGGACCTTCACTACGAGTCACGATTAACTCAAGAAGTGCTG +TGCTGGCTCAAATGCCTAGTAATTTCATCATAAGCGCAAATGTATCATTAGATGAAAGAAGCAAATTAGC +ATATGATGTAACTACACCTTGTGAAATCAAAGCATGCAGTCTAACATGCTTAAAAGTGAAAAGTATGTTA +ACTACAGTCAAAGATCTTACCATGAAGACATTCAACCCCACTCATGAGATCATTGCTCTATGTGAATTTG +AAAATATTATGACATCAAAAAGAGTAATAATACCAACCTATCTAAGACCAATTAGTGTCAAAAACAAGGA +TCTGAACTCACTAGAAAACATAGCAACCACCGAATTCAAAAATGCTATCACCAATGCGAAAATTATTCCC +TATGCTGGATTAGTATTAGTTATCACAGTTACTGACAATAAAGGAGCATTCAAATATATCAAGCCACAGA +GTCAATTTATAGTAGATCTTGGTGCCTACCTAGAAAAAGAGAGCATATATTATGTGACTACTAATTGGAA +GCATACAGCTACACGTTTTTCAATCAAACCACTAGAGGATTAAATTTAATTATCAACACTGAATGACAGG +TCCACATATATCCTCAAACTACACACTATATCCAAACATCATGAACATCTACACTACACACTTCATCACA +CAAACCAATCCCACTCAAAATCCAAAATCACTACCAGCCACTATCTGCTAGACCTAGAGTGCGAATAGGT +AAATAAAACCAAAATATGGGGTAAATAGACATTAGTTAGAGTTCAATCAATCTCAACAACCATTTATACC +GCCAATTCAATACATATACTATAAATCTTAAAATGGGAAATACATCCATCACAATAGAATTCACAAGCAA +ATTTTGGCCCTATTTTACACTAATACATATGATCTTAACTCTAATCTCTTTACTAATTATAATCACTATT +ATGATTGCAATACTAAATAAGCTAAGTGAACATAAAACATTCTGTAACAATACTCTTGAACTAGGACAGA +TGCATCAAATCAACACATAGTGCTCTACCATCATGCTGTGTCAAATTATAATCCTGTATATATAAACAAA +CAAATCCAATCTTCTCACAGAGTCATGGTGTCGCAAAACCACGCCAACTATCATGGTAGCATAGAGTAGT +TATTTAAAAATTAACATAATGATGAATTATTAGTATGGGATCAAAAACAACATTGGGGCAAATGCAACCA +TGTCCAAACACAAGAATCAACGCACTGCCAGGACTCTAGAAAAGACCTGGGATACTCTCAATCATCTAAT +TGTAATATCCTCTTGTTTATACAGATTAAATTTAAAATCTATAGCACAAATAGCACTATCAGTTCTGGCA +ATGATAATCTCAACCTCTCTCATAATTGCAGCCATAATATTCATCATCTCTGCCAATCACAAAGTTACAC +TAACAACGGTCACAGTTCAAACAATAAAAAACCACACTGAAAAAAACATCACCACCTACCTTACTCAAGT +CCCACCAGAAAGGGTTAGCTCATCCAAACAACCTACAACCACATCACCAATCCACACAAATTCAGCCACA +ACATCACCCAACACAAAGTCAGAAACACACCACACAACAGCACAAACCAAAGGCAGAACCACCACCTCAA +CACAGACCAACAAGCCGAGCACAAAACCACGCCTAAAAAATCCACCAAAAAAACCAAAAGATGATTACCA +TTTTGAAGTGTTCAACTTCGTTCCCTGTAGTATATGTGGCAACAATCAACTTTGCAAATCCATCTGTAAA +ACAATACCAAGCAACAAACCAAAGAAGAAACCAACCATCAAACCCACAAACAAACCAACCACCAAAACCA +CAAACAAAAGAGACCCAAAAACACCAGCCAAAACGACGAAAAAAGAAACTACCACCAACCCAACAAAAAA +ACCAACCCTCACGACCACAGAAAGAGACACCAGCACCTCACAATCCACTGTGCTCGACACAACCACATTA +GAACACACAATCCAACAGCAATCCCTCCACTCAACCACCCCCGAAAACACACCCAACTCCACACAAACAC +CCACAGCATCCGAGCCCTCTACATCAAATTCCACCCAAAATACCCAATCACATGCTTAGTTATTCAAAAA +CTACATCTTAGCAGAAAACCGTGACCTATCAAGCAAGAACGAAATTAAACCTGGGGCAAATAACCATGGA +GCTGCTGATCCACAGGTTAAGTGCAATCTTCCTAACTCTTGCTATTAATGCATTGTACCTCACCTCAAGT +CAGAACATAACTGAGGAGTTTTACCAATCGACATGTAGTGCAGTTAGCAGAGGTTATTTTAGTGCTTTAA +GAACAGGTTGGTATACCAGTGTCATAACAATAGAATTAAGTAATATAAAAGAAACCAAATGCAATGGAAC +TGACACTAAAGTAAAACTTATAAAACAAGAATTAGATAAGTATAAGAATGCAGTGACAGAATTACAGCTA +CTTATGCAAAACACACCAGCTGCCAACAACCGGGCCAGAAGAGAAGCACCACAGTATATGAACTATACAA +TCAATACCACTAAAAACCTAAATGTATCAATAAGCAAGAAGAGGAAACGAAGATTTCTGGGCTTCTTGTT +AGGTGTAGGATCTGCAATAGCAAGTGGTATAGCTGTATCCAAAGTTCTACACCTTGAAGGAGAAGTGAAC +AAGATCAAAAATGCTTTGTTATCTACAAACAAAGCTGTAGTCAGTCTATCAAATGGGGTCAGTGTTTTAA +CCAGCAAAGTGTTAGATCTCAAGAATTACATAAATAACCAATTATTACCCATAGTAAATCAACAGAGCTG +TCGCATCTCCAACATTGAAACAGTTATAGAATTCCAGCAGAAGAACAGCAGATTGTTGGAAATCAACAGA +GAATTCAGTGTCAATGCAGGTGTAACAACACCTTTAAGCACTTACATGTTAACAAACAGTGAGTTACTAT +CATTGATCAATGATATGCCTATAACAAATGATCAGAAAAAATTAATGTCAAGCAATGTTCAGATAGTAAG +GCAACAAAGTTATTCTATCATGTCTATAATAAAGGAAGAAGTCCTTGCATATGTTGTACAGCTACCTATC +TATGGTGTAATAGATACACCTTGCTGGAAATTACACACATCACCTCTATGCACCACCAACATCAAAGAAG +GATCAAATATTTGTTTAACAAGGACTGATAGAGGATGGTATTGTGATAATGCAGGATCAGTATCCTTCTT +TCCACAGGCTGACACTTGTAAAGTACAGTCCAATCGAGTATTTTGTGACACTATGAACAGTTTGACATTA +CCAAGTGAAGTCAGCCTTTGTAACACTGACATATTCAATTCCAAGTATGACTGCAAAATTATGACATCAA +AAACAGACATAAGCAGCTCAGTAATTACTTCTCTTGGAGCTATAGTGTCATGCTATGGTAAAACTAAATG +CACTGCATCCAACAAAAATCGTGGGATTATAAAGACATTTTCTAATGGTTGTGACTATGTGTCAAACAAA +GGAGTAGATACTGTGTCAGTGGGCAACACTTTATACTATGTAAACAAGCTGGAAGGCAAGAACCTTTATG +TAAAAGGGGAACCTATAATAAATTACTATGACCCTCTAGTGTTTCCTTCTGATGAGTTTGATGCATCAAT +ATCTCAAGTCAATGAAAAAATCAATCAAAGTTTAGCTTTTATTCGTAGATCTGATGAATTACTACATAAT +GTAAATACTGGCAAATCTACTACAAATATTATGATAACTACAATTATTATAGTAATCATTGTAGTATTGT +TATCATTAATAGCTATTGGTTTGCTGTTGTATTGCAAAGCCAAAAACACACCAGTTACACTAAGCAAAGA +CCAACTAAGTGGAATCAATAATATTGCATTCAGCAAATAGACAAAAAACCACCTGATCATGTTTCAACAA +CAGTCTGCTGATCACCAATCCCAAATCAACCCATAACAAACACTTCAACATCACAGTACAGGCTGAATCA +TTTCTTCACATCATGCTACCCACACAACTAAGCTAGATCCTTAACTCATAGTTACATAAAAACCTCAAGT +ATCACAATCAAACACTAAATCAACACATCATTCACAAAATTAACAGCTGGGGCAAATATGTCGCGAAGAA +ATCCTTGTAAATTTGAGATTAGAGGTCATTGCTTGAATGGTAGAAGATGTCACTACAGTCATAATTACTT +TGAATGGCCTCCTCATGCCTTACTAGTGAGGCAAAACTTCATGTTAAACAAGATACTCAAGTCAATGGAC +AAAAGCATAGACACTTTGTCTGAAATAAGTGGAGCTGCTGAACTGGACAGAACAGAAGAATATGCTCTTG +GTATAGTTGGAGTGCTAGAGAGTTACATAGGATCTATAAACAACATAACAAAACAATCAGCATGTGTTGC +TATGAGTAAACTTCTTATTGAGATCAATAGTGATGACATTAAAAAGCTGAGAGATAATGAAGAACCCAAT +TCACCTAAGATAAGAGTGTACAATACTGTTATATCATACATTGAGAGCAATAGAAAAAACAACAAGCAAA +CAATCCATCTGCTCAAAAGACTACCAGCAGACGTGCTGAAGAAGACAATAAAAAACACATTAGATATCCA +CAAAAGCATAATCATAAGCAACCCAAAAGAGTCAACCGTGAATGATCAAAATGACCAAACCAAAAATAAT +GATATTACCGGATAAATATCCTTGTAGTATATCATCCATATTGATTTCAAGTGAAAGCATGATTGCTACA +TTCAATCATAAAAACATATTACAATTTAACCATAACCATTTGGATAACCACCAGCGTTTATTAAATAATA +TATTTGATGAAATTCATTGGACACCTAAAAACTTATTAGATGCCACTCAACAATTTCTCCAACATCTTAA +CATCCCTGAAGATATATATACAATATATATATTAGTGTCATAATGCTTGGCCATAACGATTCTATATCAT +CCAACCATAAAACTATCTTAATAAGGTTATGGGACAAAATGGATCCCATTATTAATGGAAACTCTGCTAA +TGTGTATCTAACTGATAGTTATTTAAAAGGTGTTATCTCTTTTTCAGAATGTAATGCTTTAGGGAGTTAC +CTTTTTAACGGCCCTTATCTCAAAAATGATTACACCAACTTAATTAGTAGACAAAGTCCACTACTAGAGC +ATATGAATCTTAAAAAACTAACTATAACACAGTCATTAATATCTAGATATCATAAAGGTGAACTGAAATT +AGAAGAACCAACTTATTTCCAGTCATTACTTATGACATATAAAAGCATGTCCTCGTCTGAACAAATTGCT +ACAACTAACTTACTTAAAAAAATAATACGAAGAGCTATAGAAATAAGTGATGTAAAGGTGTACGCCATCT +TGAATAAACTAGGACTAAAGGAAAAGGACAGAGTTAAGCCCAACAATAATTCAGGTGATGAAAACTCAGT +ACTTACAACTATAATTAAAGATGATATACTTTCGGCTGTGGAAAGCAATCAATCATATACAAATTCAGAC +AAAAATCACTCAGTAAATCAAAATATCACTATCAAAACAACACTCTTGAAAAAATTGATGTGTTCAATGC +AACATCCTCCATCATGGTTAATACACTGGTTCAATTTATATACAAAATTAAATAACATATTAACACAATA +TCGATCAAATGAGGTAAAAAGTCATGGGTTTATATTAATAGATAATCAAACTTTAAGTGGTTTTCAGTTT +ATTTTAAATCAATATGGTTGTATCGTTTATCATAAAGGACTCAAAAAAATCACAACTACTACTTACAATC +AATTTTTAACATGGAAAGACATCAGCCTTAGCAGATTAAATGTTTGCTTAATTACTTGGATAAGTAATTG +TTTGAATACATTAAATAAAAGCTTAGGGCTGAGATGTGGATTCAATAATGTTGTGTTATCACAATTATTT +CTTTATGGAGATTGTATACTGAAATTATTTCATAATGAAGGCTTCTACATAATAAAAGAAGTAGAGGGAT +TTATTATGTCTTTAATTCTAAACATAACAGAAGAAGATCAATTTAGGAAACGATTTTATAATAGCATGCT +AAATAACATCACAGATGCAGCTATTAAGGCTCAAAAGAACCTACTATCAAGGGTATGTCACACTTTATTA +GACAAGACAGTGTCTGATAATATCATAAATGGTAAATGGATAATCCTATTAAGTAAATTTCTTAAATTGA +TTAAGCTTGCAGGTGATAATAATCTCAATAATTTGAGTGAGCTATATTTTCTCTTCAGAATCTTTGGACA +TCCAATGGTTGATGAAAGACAAGCAATGGATGCTGTAAGAATTAACTGTAATGAAACTAAGTTCTACTTA +TTAAGTAGTCTAAGTACGTTAAGAGGTGCTTTCATTTATAGAATCATAAAAGGGTTTGTAAATACCTACA +ACAGATGGCCCACTTTAAGGAATGCTATTGTCCTACCTCTAAGATGGTTAAACTATTATAAACTTAATAC +TTATCCATCTCTACTTGAAATCACAGAAAATGATTTGATTATTTTATCAGGATTGCGGTTCTATCGTGAA +TTTCATCTGCCTAAAAAAGTGGATCTTGAAATGATAATAAATGACAAAGCCATTTCACCTCCAAAAGATC +TAATATGGACTAGTTTTCCTAGAAATTACATGCCATCACATATACAAAATTATATAGAACATGAAAAGTT +GAAGTTCTCTGAAAGCGACAGATCAAGAAGAGTACTAGAGTATTACTTGAGAGATAATAAATTCAATGAA +TGCGATCTATACAATTGTGTAGTCAATCAAAGCTATCTCAACAACTCTAATCACGTGGTATCACTAACTG +GTAAAGAAAGAGAGCTCAGTGTAGGTAGAATGTTTGCTATGCAACCAGGTATGTTTAGGCAAATCCAAAT +CTTAGCAGAGAAAATGATAGCCGAAAATATTTTACAATTCTTCCCTGAGAGTTTGACAAGATATGGTGAT +CTAGAGCTTCAAAAGATATTAGAATTAAAAGCAGGAATAAGCAACAAGTCAAATCGTTATAATGATAACT +ACAACAATTATATCAGTAAATGTTCTATCATTACAGATCTTAGCAAATTCAATCAAGCATTTAGATATGA +AACATCATGTATCTGCAGTGATGTATTAGATGAACTGCATGGAGTACAATCTCTGTTCTCTTGGTTGCAT +TTAACAATACCTCTTGTCACAATAATATGTACATATAGACATGCACCTCCTTTCATAAAGGATCATGTTG +TTAATCTTAATGAAGTTGATGAACAAAGTGGATTATACAGATATCATATGGGTGGTATTGAGGGCTGGTG +TCAAAAACTGTGGACCATTGAAGCTATATCATTATTAGATCTAATATCTCTCAAAGGGAAATTCTCTATC +ACAGCTCTGATAAATGGTGATAATCAGTCAATTGATATAAGTAAACCAGTTAGACTTATAGAGGGTCAGA +CCCATGCTCAAGCAGATTATTTGTTAGCATTAAATAGCCTTAAATTGCTATATAAAGAGTATGCAGGTAT +AGGCCATAAGCTTAAGGGAACAGAGACCTATATATCCCGAGATATGCAGTTCATGAGCAAAACAATCCAG +CACAATGGAGTGTACTATCCAGCCAGTATCAAAAAAGTCCTGAGAGTAGGTCCATGGATAAATACAATAC +TTGATGATTTTAAAGTTAGTTTAGAATCTATAGGTAGCTTAACACAGGAGTTAGAATACAGAGGGGAAAG +CTTATTATGCAGTTTAATATTTAGGAACATTTGGTTATACAATCAAATTGCTTTGCAACTCCGAAATCAT +GCATTATGTAACAATAAGCTATATTTAGATATATTGAAAGTATTAAAACACTTAAAAACTTTTTTTAATC +TTGATAGTATCGATATGGCGTTATCATTGTATATGAATTTGCCTATGCTGTTTGGTGGTGGTGATCCTAA +TTTGTTATATCGAAGCTTTTATAGGAGAACTCCAGACTTCCTTACAGAAGCTATAGTACATTCAGTGTTT +GTGTTGAGCTATTATACTGGTCACGATTTACAAGATAAGCTCCAGGATCTTCCAGATGATAGACTGAACA +AATTCTTGACATGTGTCATCACATTCGATAAAAATCCCAATGCCGAGTTTGTAACATTGATGAGGGATCC +ACAGGCGTTAGGGTCTGAAAGGCAAGCTAAAATTACTAGTGAGATTAATAGATTAGCAGTAACAGAAGTC +TTAAGTATAGCTCCAAACAAAATATTTTCTAAAAGTGCACAACATTATACTACCACTGAGATTGATCTAA +ATGACATTATGCAAAATATAGAACCAACTTACCCTCATGGATTAAGAGTTGTTTATGAAAGTCTACCTTT +TTATAAAGCAGAAAAAATAGTTAATCTTATATCAGGAACAAAATCCATAACTAATATACTTGAAAAAACA +TCAGCAATAGATACAACTGATATTAATAGGGCTACTGATATGATGAGGAAAAATATAACTTTACTTATAA +GGATACTTCCACTAGATTGTAACAAAGACAAAAGAGAGTTATTAAGTTTAGAAAATCTTAGTATAACTGA +ATTAAGCAAGTATGTAAGAGAAAGATCTTGGTCATTATCCAATATAGTAGGAGTAACATCGCCAAGTATT +ATGTTCACAATGGACATTAAATATACAACTAGCACTATAGCCAGTGGTATAATTATAGAAAAATATAATG +TTAATAGTTTAACTCGTGGTGAAAGAGGACCTACTAAGCCATGGGTAGGTTCATCTACGCAGGAGAAAAA +AACAATGCCAGTGTACAATAGACAAGTTTTAACCAAAAAGCAAAGAGACCAAATAGATTTATTAGCAAAA +TTAGACTGGGTATATGCATCCATAGACAACAAAGATGAATTCATGGAAGAACTGAGTACTGGAACACTTG +GACTGTCATATGAAAAAGCCAAAAAGTTGTTTCCACAATATCTAAGTGTCAATTATTTACACCGTTTAAC +AGTCAGTAGTAGACCATGTGAATTCCCTGCATCAATACCAGCTTATAGAACAACAAATTATCATTTCGAT +ACTAGTCCTATCAATCATGTATTAACAGAAAAGTATGGAGATGAAGATATCGACATTGTGTTTCAAAATT +GCATAAGTTTTGGTCTTAGCCTGATGTCGGTTGTGGAACAATTCACAAACATATGTCCTAATAGAATTAT +TCTCATACCGAAGCTGAATGAGATACATTTGATGAAACCTCCTATATTTACAGGAGATGTTGATATCATC +AAGTTGAAGCAAGTGATACAAAAACAGCATATGTTCCTACCAGATAAAATAAGTTTAACCCAATATGTAG +AATTATTCCTAAGTAACAAAGCACTTAAATCTGGATCTAACATCAATTCTAATTTAATATTAGTACATAA +AATGTCTGATTATTTTCATAATGCTTATATTTTAAGTACTAATTTAGCTGGACATTGGATTCTAATTATT +CAACTTATGAAAGATTCAAAAGGTATTTTTGAAAAAGATTGGGGAGAGGGGTACATAACTGATCATATGT +TCATTAATTTGAATGTTTTCTTTAATGCTTATAAGACTTATTTGCTATGTTTTCATAAAGGTTATGGTAA +AGCAAAATTAGAATGTGATATGAACACTTCAGATCTTCTTTGTGTTTTGGAGTTAATAGACAGTAGCTAC +TGGAAATCTATGTCTAAAGTTTTCCTAGAACAAAAAGTCATAAAATACATAGTCAATCAAGACACAAGTT +TGCATAGAATAAAAGGCTGTCACAGTTTTAAGTTGTGGTTTTTAAAACGCCTTAATAATGCTAAATTTAC +CGTATGCCCTTGGGTTGTTAACATAGATTATCACCCAACACATATGAAAGCTATATTATCTTACATAGAT +TTAGTTAGAATGGGGTTAATAAATGTAGATAAATTAACCATTAAAAATAAAAACAAATTCAATGATGAAT +TTTACACATCAAATCTCTTTTACATTAGTTATAACTTTTCAGACAACACTCATTTGCTAACAAAACAAAT +AAGAATTGCTAATTCAGAATTAGAAGATAATTATAACAAACTATATCACCCAACCCCAGAAACTTTAGAA +AATATATCATTAATTCCTGTTAAAAGTAATAATAGTAACAAACCTAAATTTTGTATAAGTGGAAATACCG +AATCTATAATGATGTCAACATTCTCTAATAAAATGCATATTAAATCTTCCACTGTTACCACAAGATTCAA +TTATAGCAAACAAGACTTGTACAATTTATTTCCAAATGTTGTGATAGACAGGATTATAGATCATTCAGGT +AATACAGCAAAATCTAACCAACTTTACATCACCACTTCACATCAGACATCTTTAGTAAGGAATAGTGCAT +CACTTTATTGCATGCTTCCTTGGCATCATGTCAATAGATTTAACTTTGTATTTAGTTCCACAGGATGCAA +GATCAGTATAGAGTATATTTTAAAAGATCTTAAGATTAAGGACCCCAGTTGTATAGCATTCATAGGTGAA +GGAGCTGGTAACTTATTATTACGTACGGTAGTAGAACTTCATCCAGACATAAGATACATTTACAGAAGTT +TAAAAGATTGCAATGATCATAGTTTACCTATTGAATTTCTAAGATTATACAACGGGCATATAAACATAGA +TTATGGTGAGAATTTAACCATTCCTGCTACAGATGCAACTAATAACATTCATTGGTCTTATTTACATATA +AAATTTGCAGAACCTATTAGCATCTTTGTCTGCGATGCTGAATTACCTGTTACAGCCAATTGGAGTAAAA +TTATAATTGAATGGAGTAAGCATGTAAGAAAGTGCAAGTACTGTTCTTCTGTAAATAGATGCATTTTAAT +CGCAAAATATCATGCTCAAGATGATATTGATTTCAAATTAGATAACATTACTATATTAAAAACTTACGTG +TGCCTAGGTAGCAAGTTAAAAGGATCTGAAGTTTACTTAGTCCTTACAATAGGCCCTGCAAATATACTTC +CTGTTTTTGATGTTGTGCAAAATGCTAAATTGATTTTTTCAAGAACTAAAAATTTCATTATGCCTAAAAA +AACTGACAAGGAATCTATCGATGCAAATATTAAAAGCTTAATACCTTTCCTTTGTTACCCTATAACAAAA +AAAGGAATTAAGACTTCATTGTCAAAATTGAAGAGTGTAGTTAATGGGGATATATTATCATATTCTATAG +CTGGACGTAATGAAGTATTCAGCAACAAGCTTATAAACCACAAGCATATGAATATCCTAAAATGGCTAGA +TCATGTTTTAAATTTTAGATCAGCTGAACTTAATTACAATCATTTATACATGATAGAGTCCACATATCCT +TACTTAAGTGAATTGTTAAATAGTTTAACAACCAATGAGCTCAAGAAACTGATTAAAATAACAGGTAGTG +TACTATACAACCTTCCCAACGAACAGTAACTTAAAATATCATTAACAAGTTTGGTCAAATTTAGATGCTA +ACACATCATTATATTATAGTTATTAAAAAATATGCAAACTTTTCAATAATTTAGCTTACTGATTCCAAAA +TTATCATTTTATTTTTAAGGGGTTGAATAAAAGTCTAAAACTAACAATGATACATGTGCATTTACAACAC +AACGAGACATTAGTTTTTGACACTTTTTTTCTCGT + From cdbad2163e287842668bae7fe8b3b7181e273452 Mon Sep 17 00:00:00 2001 From: ChrisgKent Date: Tue, 19 Mar 2024 16:09:25 +0000 Subject: [PATCH 3/3] Auto updating index --- index.json | 33 ++++++++++++++++++++++++++++++++- 1 file changed, 32 insertions(+), 1 deletion(-) diff --git a/index.json b/index.json index bda7574..6d03e16 100644 --- a/index.json +++ b/index.json @@ -1,5 +1,5 @@ { - "github-commit-sha": "e1e427fa134614b79cdde6d18d7a9cef94841e96", + "github-commit-sha": "9858689631eaaaed8ab3adf8e92a93cd1238c381", "primerschemes": { "artic-measles": { "400": { @@ -550,6 +550,37 @@ } } }, + "rsva-rsvb": { + "1000": { + "v1.0.0": { + "algorithmversion": "primalscheme3:0.1.0", + "ampliconsize": 1000, + "articbedversion": "v3.0", + "authors": [ + "BCCDC", + "Quick-lab" + ], + "citations": [], + "collections": [ + "WHOLE-GENOME", + "MULTI-TARGET" + ], + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/rsva-rsvb/1000/v1.0.0/info.json", + "license": "CC BY-SA 4.0", + "primer_bed_md5": "8c710359de1fbf4c57dc93e466ae3125", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/rsva-rsvb/1000/v1.0.0/primer.bed", + "primerclass": "primerschemes", + "reference_fasta_md5": "e2ca3da2ff7d2290cd2011d031ec7744", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/rsva-rsvb/1000/v1.0.0/reference.fasta", + "schemename": "rsva-rsvb", + "schemeversion": "v1.0.0", + "species": [ + 11250 + ], + "status": "tested" + } + } + }, "who-tb-amr-panel": { "1000": { "v1.0.0": {