From d96a5d1ac676ea07b3ec22c0990102c47fdff063 Mon Sep 17 00:00:00 2001 From: Alberto Mercurio Date: Sat, 11 Jan 2025 16:39:58 +0100 Subject: [PATCH 1/3] Create bibliography file --- Makefile | 3 +- QuantumToolbox.jl/lowrank.qmd | 2 +- _environment | 2 +- _quarto.yml | 2 + bibliography.bib | 72 +++++++++++++++++++++++++++++++++++ 5 files changed, 77 insertions(+), 4 deletions(-) create mode 100644 bibliography.bib diff --git a/Makefile b/Makefile index 290ba60..86deb51 100644 --- a/Makefile +++ b/Makefile @@ -6,8 +6,7 @@ include _environment default: help render: - ${JULIA} --project=@. -e 'import Pkg; Pkg.resolve(); Pkg.instantiate(); Pkg.precompile(); using QuantumToolbox, HierarchicalEOM;' - ${JULIA} --project=@. -e 'using QuantumToolbox, HierarchicalEOM;' + ${JULIA} --project=@. -e 'import Pkg; Pkg.resolve();' ${QUARTO} render preview: diff --git a/QuantumToolbox.jl/lowrank.qmd b/QuantumToolbox.jl/lowrank.qmd index 27e5cca..ef6ccf4 100644 --- a/QuantumToolbox.jl/lowrank.qmd +++ b/QuantumToolbox.jl/lowrank.qmd @@ -7,7 +7,7 @@ date-format: iso engine: julia --- -In this tutorial, we will show how to solve the master equation using the low-rank method. For a detailed explanation of the method, we recommend to read the article: [Phys. Rev. Research 6, 023072 (2024)](https://doi.org/10.1103/PhysRevResearch.6.023072). +In this tutorial, we will show how to solve the master equation using the low-rank method. For a detailed explanation of the method, we recommend to read the Ref. [@gravina2024adaptive]. As a test, we will consider the dissipative Ising model with a transverse field. The Hamiltonian is given by diff --git a/_environment b/_environment index 388ce63..e71fdb6 100644 --- a/_environment +++ b/_environment @@ -1 +1 @@ -JULIA_NUM_THREADS=16 +JULIA_NUM_THREADS=4 diff --git a/_quarto.yml b/_quarto.yml index 3f08198..82aafa2 100644 --- a/_quarto.yml +++ b/_quarto.yml @@ -24,6 +24,8 @@ website: - icon: github href: https://github.com/qutip/qutip-julia-tutorials +bibliography: bibliography.bib + format: html: theme: diff --git a/bibliography.bib b/bibliography.bib new file mode 100644 index 0000000..e540ce5 --- /dev/null +++ b/bibliography.bib @@ -0,0 +1,72 @@ +@book{Gardiner-Zoller2004, + title = {Quantum Noise}, + ISBN = {9783540223016}, + url = {https://link.springer.com/book/9783540223016}, + publisher = {Springer Berlin, Heidelberg}, + author = {Gardiner, Crispin and Zoller, Peter}, + year = {2004}, + month = aug +} + +@book{Nielsen-Chuang2011, + title = {Quantum Computation and Quantum Information: 10th Anniversary Edition}, + ISBN = {9780511976667}, + DOI = {10.1017/cbo9780511976667}, + publisher = {Cambridge University Press}, + author = {Nielsen, Michael A. and Chuang, Isaac L.}, + year = {2012}, + month = jun +} + +@article{Jozsa1994, + author = {Richard Jozsa}, + title = {Fidelity for Mixed Quantum States}, + journal = {Journal of Modern Optics}, + volume = {41}, + number = {12}, + pages = {2315--2323}, + year = {1994}, + publisher = {Taylor \& Francis}, + doi = {10.1080/09500349414552171} +} + +@article{gravina2024adaptive, + title = {{Adaptive variational low-rank dynamics for open quantum systems}}, + author = {Gravina, Luca and Savona, Vincenzo}, + journal = {Phys. Rev. Res.}, + volume = {6}, + issue = {2}, + pages = {023072}, + numpages = {18}, + year = {2024}, + month = {Apr}, + publisher = {American Physical Society}, + doi = {10.1103/PhysRevResearch.6.023072} +} + +@article{Tanimura1989, + title = {Time Evolution of a Quantum System in Contact with a Nearly Gaussian-Markoffian Noise Bath}, + volume = {58}, + ISSN = {1347-4073}, + DOI = {10.1143/jpsj.58.101}, + number = {1}, + journal = {Journal of the Physical Society of Japan}, + publisher = {Physical Society of Japan}, + author = {Tanimura, Yoshitaka and Kubo, Ryogo}, + year = {1989}, + month = jan, + pages = {101–114} +} + +@article{Huang2023, + doi = {10.1038/s42005-023-01427-2}, + year = {2023}, + month = {Oct}, + publisher = {Nature Portfolio}, + volume = {6}, + number = {1}, + pages = {313}, + author = {Huang, Yi-Te and Kuo, Po-Chen and Lambert, Neill and Cirio, Mauro and Cross, Simon and Yang, Shen-Liang and Nori, Franco and Chen, Yueh-Nan}, + title = {An efficient {J}ulia framework for hierarchical equations of motion in open quantum systems}, + journal = {Communications Physics} +} \ No newline at end of file From 509523a902bae3d7c0b0eafc4c2229c77650a612 Mon Sep 17 00:00:00 2001 From: Alberto Mercurio Date: Sat, 11 Jan 2025 18:25:53 +0100 Subject: [PATCH 2/3] Change README --- README.md | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/README.md b/README.md index 0a02c0a..40bdde1 100644 --- a/README.md +++ b/README.md @@ -25,8 +25,7 @@ make render or ```shell source _environment -julia --project=@. -e 'import Pkg; Pkg.resolve(); Pkg.instantiate(); Pkg.precompile()' -julia --project=@. -e 'using QuantumToolbox, HierarchicalEOM;' +julia --project=@. -e 'import Pkg; Pkg.resolve();' quarto render ``` From 6e1030475769dfc4629a86053b6b889de421cf43 Mon Sep 17 00:00:00 2001 From: Alberto Mercurio Date: Mon, 13 Jan 2025 10:07:07 +0100 Subject: [PATCH 3/3] Remove unused entries in bib file --- bibliography.bib | 59 ------------------------------------------------ 1 file changed, 59 deletions(-) diff --git a/bibliography.bib b/bibliography.bib index e540ce5..0ec9ddd 100644 --- a/bibliography.bib +++ b/bibliography.bib @@ -1,35 +1,3 @@ -@book{Gardiner-Zoller2004, - title = {Quantum Noise}, - ISBN = {9783540223016}, - url = {https://link.springer.com/book/9783540223016}, - publisher = {Springer Berlin, Heidelberg}, - author = {Gardiner, Crispin and Zoller, Peter}, - year = {2004}, - month = aug -} - -@book{Nielsen-Chuang2011, - title = {Quantum Computation and Quantum Information: 10th Anniversary Edition}, - ISBN = {9780511976667}, - DOI = {10.1017/cbo9780511976667}, - publisher = {Cambridge University Press}, - author = {Nielsen, Michael A. and Chuang, Isaac L.}, - year = {2012}, - month = jun -} - -@article{Jozsa1994, - author = {Richard Jozsa}, - title = {Fidelity for Mixed Quantum States}, - journal = {Journal of Modern Optics}, - volume = {41}, - number = {12}, - pages = {2315--2323}, - year = {1994}, - publisher = {Taylor \& Francis}, - doi = {10.1080/09500349414552171} -} - @article{gravina2024adaptive, title = {{Adaptive variational low-rank dynamics for open quantum systems}}, author = {Gravina, Luca and Savona, Vincenzo}, @@ -43,30 +11,3 @@ @article{gravina2024adaptive publisher = {American Physical Society}, doi = {10.1103/PhysRevResearch.6.023072} } - -@article{Tanimura1989, - title = {Time Evolution of a Quantum System in Contact with a Nearly Gaussian-Markoffian Noise Bath}, - volume = {58}, - ISSN = {1347-4073}, - DOI = {10.1143/jpsj.58.101}, - number = {1}, - journal = {Journal of the Physical Society of Japan}, - publisher = {Physical Society of Japan}, - author = {Tanimura, Yoshitaka and Kubo, Ryogo}, - year = {1989}, - month = jan, - pages = {101–114} -} - -@article{Huang2023, - doi = {10.1038/s42005-023-01427-2}, - year = {2023}, - month = {Oct}, - publisher = {Nature Portfolio}, - volume = {6}, - number = {1}, - pages = {313}, - author = {Huang, Yi-Te and Kuo, Po-Chen and Lambert, Neill and Cirio, Mauro and Cross, Simon and Yang, Shen-Liang and Nori, Franco and Chen, Yueh-Nan}, - title = {An efficient {J}ulia framework for hierarchical equations of motion in open quantum systems}, - journal = {Communications Physics} -} \ No newline at end of file