Another issue with the duplicate recommended packages

[gaborcsardi]

https://github.com/r-universe/cafferychen777/actions/runs/6056986512/job/16440799469

$repos
                                                    binaries 
 "https://cafferychen777.r-universe.dev/bin/linux/jammy/4.3" 
                                                    universe 
                     "https://cafferychen777.r-universe.dev/" 
                                                         P3M 
"https://packagemanager.posit.co/all/__linux__/jammy/latest" 
                                                        CRAN 
                               "https://cloud.r-project.org/" 
                                                    BioCsoft 
               "https://bioconductor.org/packages/3.17/bioc" 
                                                     BioCann 
    "https://bioconductor.org/packages/3.17/data/annotation" 
                                                     BioCexp 
    "https://bioconductor.org/packages/3.17/data/experiment" 

> pak::pkg_install('/github/workspace/ggpicrust2_1.7.2.tar.gz')

v Updated metadata database: 4.23 MB in 12 files.

i Updating metadata database
v Updating metadata database ... done

Error: 
! error in pak subprocess
Caused by error: 
! Could not solve package dependencies:
* local::/github/workspace/ggpicrust2_1.7.2.tar.gz:
  * Can't install dependency ggplot2
  * Can't install dependency lefser
  * Can't install dependency Maaslin2
  * Can't install dependency MicrobiomeStat
* MicrobiomeStat: Can't install dependency MASS
* MASS: Needs R >= 4.4
* ggplot2: Can't install dependency MASS
* lefser: Can't install dependency MASS
* Maaslin2: Can't install dependency MASS

[gaborcsardi]

This is now fixed in dev pak:

> source("https://pak.r-lib.org/install.R")
Installing pak from stream stable.
[...]
> pak::pkg_remove("MASS", lib = .Library)
> pak::pkg_install("cafferychen777/ggpicrust2")
! Using bundled GitHub PAT. Please add your own PAT using `gitcreds::gitcreds_set()`.
✔ Updated metadata database: 4.24 MB in 10 files.
✔ Updating metadata database ... done
Error:
! error in pak subprocess
Caused by error:
! Could not solve package dependencies:
* cafferychen777/ggpicrust2:
  * Can't install dependency ggplot2
  * Can't install dependency lefser
  * Can't install dependency Maaslin2
  * Can't install dependency MicrobiomeStat
* MicrobiomeStat: Can't install dependency MASS
* MASS: Needs R >= 4.4
* ggplot2: Can't install dependency MASS
* lefser: Can't install dependency MASS
* Maaslin2: Can't install dependency MASS
Type .Last.error to see the more details.

> source("https://pak.r-lib.org/install.R?stream=devel")
Installing pak from stream devel.
[...]
> pak::pkg_install("cafferychen777/ggpicrust2")
! Using bundled GitHub PAT. Please add your own PAT using `gitcreds::gitcreds_set()`.
✔ Loading metadata database ... done

→ Will install 184 packages.
→ Will update 1 package.
→ Will download 1 CRAN package (121.47 kB).
→ Will download 184 packages with unknown size.
[...]
+ MASS                           7.3-60     [dl]
[...]