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External pointer is not valid #121

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brudis-r7 opened this Issue Sep 9, 2016 · 0 comments

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brudis-r7 commented Sep 9, 2016

Fell into this today:

xml2::read_html("<!DOCTYPE html>")
Rscript -e 'xml2::read_html("<!DOCTYPE html>")' # to ensure it's not RStudio or R GUI causing the issue
{xml_document}
Error in eval(substitute(expr), envir, enclos) :
  external pointer is not valid
Calls: <Anonymous> ... xml_attrs -> xml_attrs.xml_node -> node_attrs -> .Call
Execution halted

That's with the github version of xml2. With the CRAN version of xml2 it hard crashes R.

Of note:

Rscript -e 'XML::htmlParse("<!DOCTYPE html>")'

works fine.

I'm trying to put together some small reproducible examples that also break both xml2 and XML but I suspect I'll be filing those bugs with the libxml2 folks.


Rscript -e "library(xml2); library(XML); devtools::session_info()"
Loading required package: methods
Session info -------------------------------------------------------------------
 setting  value
 version  R version 3.3.1 Patched (2016-06-22 r70818)
 system   x86_64, darwin13.4.0
 ui       X11
 language (EN)
 collate  en_US.UTF-8
 tz       America/New_York
 date     2016-09-09

Packages -----------------------------------------------------------------------
 package  * version     date       source
 devtools   1.11.1.9000 2016-06-01 Github (hadley/devtools@75b7d12)
 digest     0.6.10      2016-08-02 cran (@0.6.10)
 memoise    1.0.0       2016-01-29 CRAN (R 3.3.0)
 Rcpp       0.12.7      2016-09-05 cran (@0.12.7)
 withr      1.0.1       2016-02-04 CRAN (R 3.3.0)
 XML      * 3.98-1.4    2016-03-01 CRAN (R 3.3.0)
 xml2     * 1.0.0.9000  2016-09-09 Github (hadley/xml2@1a75d4a)
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