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README.md

Sequence Alignment

This is a small project that computes the dynamic programming matrices for any two sequences and a score function using these algorithms:

  • Needleman-Wunsch
  • Smith-Waterman
  • Overlap-Alignment

In addition, it computes the traceback for these matrices and present the optimal alignment.
That project handled as an homework assignment for the course: "Algorithms in Computational Biology".



Enjoy!