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25 Open 48 Closed
25 Open 48 Closed
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Issues list

example VCF
#80 opened May 27, 2024 by ilivyatan
Question regarding combine mutational signature from different resources
#78 opened Mar 8, 2024 by marshelma
tri.counts.method for hg38 genome
#77 opened Aug 23, 2023 by tanubrata
moving data content to sysdata?
#74 opened Jul 8, 2022 by pawelqs
whichsignatures not working
#73 opened Feb 16, 2022 by temizna
Normalisation approaches for targeted panels
#72 opened Jan 28, 2022 by ARChakravarthy
1
Normalization method for whole exome data
#68 opened Jan 20, 2021 by seunghun23
mut.to.sigs.input for DBS signatures creates empty output
#67 opened Aug 7, 2020 by kittysher
5
plotSignatures do not display title
#65 opened Jun 28, 2020 by Jingjiao-ma
1
normalization of hg38 exome
#64 opened Jun 26, 2020 by ChelseaCHENX
1
vcf.to.sigs.input() Error arguments imply differing number of rows: 1, 0
#63 opened Jun 15, 2020 by alpreyes
4
Cosine Similarity
#62 opened May 10, 2020 by DarioS
Error With bwakit Alignments
#61 opened May 6, 2020 by DarioS
Trinucleotide Counts for More Genomes
#51 opened Jun 17, 2019 by DarioS
makePie fails with only 1 signature weight non-zero and/or with unknown=0
#49 opened Mar 20, 2019 by tedtoal
Unknown error with my data
#48 opened Mar 14, 2019 by beginner984
custom panel normalization
#47 opened Dec 26, 2018 by idanbudin
1
Mutational Signatures for mouse mutation data?
#45 opened Nov 5, 2018 by SNRNS
How to make signatures for multiple samples at once?
#44 opened Oct 18, 2018 by stevekm
Filtering exome SNVs
#43 opened Oct 10, 2018 by ysbioinfo
Weighting of mutations
#34 opened Jun 11, 2018 by lima1
chr name problem for GRCh38
#31 opened Apr 22, 2018 by Wszwei
Normalization method for RNA-Seq data?
#25 opened Dec 19, 2017 by stevekm
vcf.to.sigs.input breaks when file contains annotations (ID field)
#24 opened Nov 14, 2017 by markozecevic
More normalization
#18 opened Jun 13, 2017 by sigven
ProTip! Adding no:label will show everything without a label.