/GenomicSignatures

Code for Genomic Signatures
  1. Mathematica 100.0%
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Latest commit fe1586d May 6, 2016 @rallis Update README.md
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alltogether/experiment/fasta Package and Notebook code Nov 27, 2015
separation_planes
GenChaosGame.m
GenDistanceFunctions.m Package and Notebook code Nov 27, 2015
GenMDSTools.m
README.md
main.nb Package and Notebook code Nov 27, 2015

README.md

GenomicSignatures

Code for Genomic Signatures

Instructions

  1. Place fasta files inside the directory "/alltogether/experiment/fasta"
  2. Start running cell after cell from Mathematica notebook "main.nb"

Separation planes

Mathematica code and text files with sets of points for each map, can be found on /separation_planes directory. Open separation_planes_code.nb file, change the input file name and run the code to see the computation of separation plane for the map specified.