Code for Genomic Signatures
Mathematica
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alltogether/experiment/fasta
separation_planes
GenChaosGame.m
GenDistanceFunctions.m
GenMDSTools.m
README.md
main.nb

README.md

GenomicSignatures

Code for Genomic Signatures

Instructions

  1. Place fasta files inside the directory "/alltogether/experiment/fasta"
  2. Start running cell after cell from Mathematica notebook "main.nb"

Separation planes

Mathematica code and text files with sets of points for each map, can be found on /separation_planes directory. Open separation_planes_code.nb file, change the input file name and run the code to see the computation of separation plane for the map specified.