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@ramseylab

Ramsey Laboratory at Oregon State University

Computational Systems Biology

Pinned

  1. cs340 Public

    Some code for the course CS340, Introduction to Databases, at Oregon State University

    Python 1 4

  2. RTX-KG2 Public

    Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

  3. cerenkov3 Public

    Computational elucidation of the regulatory noncoding variome 3

    Python

  4. ARAX Public

    Our work on the NCATS Biomedical Data Translator project.

  5. Dizzy Public

    Framework for stochastic kinetic modeling of biochemical reaction networks (Java code)

    Java 1

  6. csx46 Public

    Code for the 2020 class Networks in Computational Biology (CS446/546) at Oregon State University

    Jupyter Notebook 13 4

Repositories

  • lab.saramsey.org Public

    Ramsey Lab website

    HTML 0 Apache-2.0 0 0 0 Updated Sep 19, 2022
  • ldnh Public

    Process square-wave voltammograms using LDNH method

    R 1 MIT 0 0 0 Updated Aug 2, 2022
  • cs340 Public

    Some code for the course CS340, Introduction to Databases, at Oregon State University

    Python 1 MIT 4 1 0 Updated May 26, 2022
  • RTX-KG2 Public

    Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    0 0 0 0 Updated Feb 9, 2022
  • htsrecomb Public

    Code for finding putative recombination events from high-throughput sequence data from bacterial co-culture experiments

    R 0 Apache-2.0 0 0 0 Updated Nov 24, 2021
  • cerenkov Public

    Computational elucidation of the regulatory noncoding variome

    Python 1 Apache-2.0 0 2 0 Updated Mar 27, 2021
  • ARAX Public

    Our work on the NCATS Biomedical Data Translator project.

    0 0 0 0 Updated Nov 4, 2020
  • csx46 Public

    Code for the 2020 class Networks in Computational Biology (CS446/546) at Oregon State University

    Jupyter Notebook 13 Apache-2.0 4 0 0 Updated Oct 29, 2020
  • aws-manage Public

    Web tool for managing Ramsey Lab EC2 instances

    Python 0 Apache-2.0 0 4 0 Updated Aug 6, 2020
  • vmb651 Public

    Bioinformatics Workshop

    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Apr 14, 2020

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