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@matthewreyna matthewreyna released this Jan 18, 2018 · 3 commits to master since this release

  • Minor updates
  • Performance improvements
Assets 2

@matthewreyna matthewreyna released this Jan 1, 2018 · 6 commits to master since this release

  • Breaking changes.
  • Simplified interface.
  • Added consensus statistical test.
  • Updated visualizations.
  • Accumulated performance improvements.
Assets 2

@matthewreyna matthewreyna released this Jan 1, 2018 · 55 commits to master since this release

  • Accumulated updates and performance improvements.
Assets 2

@mdml mdml released this Jun 24, 2015 · 131 commits to master since this release

  • Update influence matrices to be stored/loaded as HDF5 by default.
  • Fix transpose error in generating influence matrices.
  • Small bug fixes to visualization.
Assets 2

@jveldridge jveldridge released this Dec 12, 2014 · 165 commits to master since this release

Initial non-beta release of HotNet2 associated with the publication of:

M.D.M. Leiserson, F. Vandin, H.T. Wu, J.R. Dobson, J.V. Eldridge, J.L. Thomas, A. Papoutsaki, Y. Kim, B. Niu, M. McLellan, M.S. Lawrence, A.G. Perez, D. Tamborero, Y. Cheng, G.A. Ryslik, N. Lopez-Bigas, G. Getz, L. Ding, and B.J. Raphael. (2014) Pan-Cancer Network Analysis Identifies Combinations of Rare Somatic Mutations across Pathways and Protein Complexes. Nature Genetics. In press.

This release supports running both HotNet2 as well as the classic HotNet algorithm and contains significant
performance and output visualization improvements over previous versions.

Assets 2
Pre-release

@jveldridge jveldridge released this Feb 8, 2014 · 432 commits to master since this release

Fixes visualization bugs.

Assets 2
Pre-release

@raphael-group raphael-group released this Jan 10, 2014 · 432 commits to master since this release

v0.0.1-beta

Fixed formatting in example/README.md
Assets 2
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