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Clojure API for querying Ensembl database
Clojure
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src/ensembl
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README.md

ensembl

An experimental Clojure API wrapping the excellent Java Ensembl library JEnsembl, http://jensembl.sourceforge.net/.

This is alpha software: it is incomplete and the API is subject to change.

Please drop me a line if you would like to help with this effort or have suggestions for how the API should shape up.

Usage

(use 'ensembl.core)

(def ensreg (registry :ensembldb))

(def human (species "human" :registry ensreg)

or

(with-registry ensreg (def human (species "human")))

(list-chromosomes human)

License

Copyright (C) 2012 Ray Miller ray@1729.org.uk.

Distributed under the Eclipse Public License, the same as Clojure.

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