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CElegansNeuroConstructBundle
============================
This file contains instructions for installing the software bundle and
running neuroConstruct.
A full guide to getting started is on the OpenWorm Wiki:
https://github.com/openworm/OpenWorm/wiki/Running-the-C.-elegans-model-in-neuroConstruct
Mac / Linux / Unix:
-------------------
Prerequisites:
To run this software, you will need the Java Development Kit (JDK).
You can download the right version for your machine from the Oracle website:
http://www.oracle.com/technetwork/java/javase/downloads/index.html
You may need to set up your PATH environment variable so that your system can
find the Java installation. Instructions on how to do this are here:
https://www.java.com/en/download/help/path.xml
Setup instructions:
unzip CElegansNeuroConstructBundle-snapshot-{{DATE}}.zip
cd CElegansNeuroConstructBundle-snapshot-{{DATE}}
./setup.sh
To run:
cd CElegansNeuroConstructBundle-snapshot-{{DATE}}/neuroConstruct
./nC.sh
Windows:
--------
Prerequisites:
To run this software, you will need the Java Development Kit (JDK).
You can download the right version for your machine from the Oracle website:
http://www.oracle.com/technetwork/java/javase/downloads/index.html
You may need to set up your PATH environment variable so that Windows can
find the Java installation. Instructions on how to do this are here:
https://www.java.com/en/download/help/path.xml
Setup instructions:
Extract the zip file by right-clicking and selecting "Extract all".
Browse to the extracted folder.
Run the file "setup.bat".
To run:
Go to folder "CElegansNeuroConstructBundle-snapshot-{{DATE}}/neuroConstruct"
Run the file "nC.bat".
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