A Python package for Approximate Bayesian Computation
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README.md

SimpleABC

A Python package for Approximate Bayesian Computation Version 0.2.0

TODO

  • Example scripts
  • Support alternate importance sampling kernel support in Model class
  • Set default importance sampling kernel
  • More ABC algorithms
  • Parallelize PMC
  • Better parallelization all around

Install

Clone this repo with git.

SSH

git clone git@github.com:rcmorehead/SIMPLE-ABC.git

HTTPS

git clone https://github.com/rcmorehead/SIMPLE-ABC.git

Maybe one day I'll set up pip, if you are lucky

Overview

abc_overview.jpg

References

###ABC Sunnåker et al. - Approximate Bayesian Computation

###Population Monte Carlo for ABC Beaumont et al. -Adaptive approximate Bayesian computation
arxiv version