CRAN package check test suite fails for Fedora and Solaris

[rcst]

CRAN Package Check Results for Package rim

Last updated on 2021-06-28 04:56:18 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.4.0	26.08	31.87	57.95	OK
r-devel-linux-x86_64-debian-gcc	0.4.0	15.05	25.17	40.22	OK
r-devel-linux-x86_64-fedora-clang	0.4.0			86.48	ERROR
r-devel-linux-x86_64-fedora-gcc	0.4.0			73.71	ERROR
r-devel-windows-x86_64	0.4.0	29.00	60.00	89.00	OK
r-devel-windows-x86_64-gcc10-UCRT	0.4.0				OK
r-patched-linux-x86_64	0.4.0	17.07	30.92	47.99	OK
r-patched-solaris-x86	0.4.0			4.90	ERROR
r-release-linux-x86_64	0.4.0	17.36	31.06	48.42	OK
r-release-macos-x86_64	0.4.0				OK
r-release-windows-ix86+x86_64	0.4.0	42.00	56.00	98.00	OK
r-oldrel-macos-x86_64	0.4.0				OK

Check Details

Version: 0.4.0

Check: tests

Result: ERROR

     Running ‘testthat.R’ [7s/10s]

    Running the tests in ‘tests/testthat.R’ failed.

    Complete output:

     > library(testthat)

     > test_check("rim")

     Loading required package: rim

     Maxima successfully registered as knitr engine!

     Quitting from lines 16-18 (/data/gannet/ripley/R/packages/tests-clang/rim.Rcheck/rim/extdata/test.Rmd)

     ══ Skipped tests ═══════════════════════════════════════════════════════════════

     • No warnings to be tested under Maxima 5.43.0

     (1)

    

     ══ Failed tests ════════════════════════════════════════════════════════════════

     ── Error (test-apropos.R:4:3): apropos returns formatted strings ───────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i3) <<prompt;

     Backtrace:

     █

     1. ├─testthat::expect_match(maxima.apropos("int"), "^[[:space:]|[:print:]]$") test-apropos.R:4:2

     2. └─rim::maxima.apropos("int")

     3. └─maxima.env$maxima$get(paste0("apropos("", keystring, "");"))

     ── Error (test-ask-user.R:6:3): ask prompts are returned ───────────────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i4) <<prompt;

     Backtrace:

     █

     1. ├─testthat::expect_match(maxima.get("y;"), "^[[:space:]|[:print:]]$") test-ask-user.R:6:2

     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")

     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))

     4. └─rim::maxima.get("y;")

     5. └─maxima.env$maxima$get(command)

     ── Error (test-engine.R:11:3): maxima knitr engine works ───────────────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i5) <<prompt;

     Backtrace:

     █

     1. └─knitr::knit(input = fr[1], output = fo, quiet = TRUE, envir = .GlobalEnv) test-engine.R:11:2

     2. └─knitr:::process_file(text, output)

     3. ├─base::withCallingHandlers(...)

     4. ├─knitr:::process_group(group)

     5. └─knitr:::process_group.block(group)

     6. └─knitr:::call_block(x)

     7. └─knitr:::block_exec(params)

     8. ├─knitr:::in_dir(input_dir(), engine(options))

     9. └─rim:::engine(options)

     10. └─maxima.env$mx$get(code[i])

     ── Error (test-execute.R:5:3): execution returns formatted strings ─────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i7) <<prompt;

     Backtrace:

     █

     1. ├─testthat::expect_match(maxima.get("2+2;"), "^4$") test-execute.R:5:2

     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")

     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))

     4. └─rim::maxima.get("2+2;")

     5. └─maxima.env$maxima$get(command)

     ── Error (test-setformat.R:8:3): changing the output format works ──────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i10) <<prompt;

     Backtrace:

     █

     1. ├─testthat::expect_match(maxima.get("2+2;"), "4") test-setformat.R:8:2

     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")

     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))

     4. └─rim::maxima.get("2+2;")

     5. └─maxima.env$maxima$get(command)

    

     [ FAIL 5 | WARN 0 | SKIP 1 | PASS 4 ]

     Error: Test failures

     Execution halted

Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.4.0

Check: tests

Result: ERROR

     Running ‘testthat.R’ [9s/13s]

    Running the tests in ‘tests/testthat.R’ failed.

    Complete output:

     > library(testthat)

     > test_check("rim")

     Loading required package: rim

     Maxima successfully registered as knitr engine!

     Quitting from lines 10-13 (/data/gannet/ripley/R/packages/tests-devel/rim.Rcheck/rim/extdata/test.Rmd)

     ══ Skipped tests ═══════════════════════════════════════════════════════════════

     • No warnings to be tested under Maxima 5.43.0

     (1)

    

     ══ Failed tests ════════════════════════════════════════════════════════════════

     ── Error (test-ask-user.R:6:3): ask prompts are returned ───────────────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i4) <<prompt;

     Backtrace:

     █

     1. ├─testthat::expect_match(maxima.get("y;"), "^[[:space:]|[:print:]]*$") test-ask-user.R:6:2

     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")

     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))

     4. └─rim::maxima.get("y;")

     5. └─maxima.env$maxima$get(command)

     ── Error (test-engine.R:11:3): maxima knitr engine works ───────────────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i4) <<prompt;

     Backtrace:

     █

     1. └─knitr::knit(input = fr[1], output = fo, quiet = TRUE, envir = .GlobalEnv) test-engine.R:11:2

     2. └─knitr:::process_file(text, output)

     3. ├─base::withCallingHandlers(...)

     4. ├─knitr:::process_group(group)

     5. └─knitr:::process_group.block(group)

     6. └─knitr:::call_block(x)

     7. └─knitr:::block_exec(params)

     8. ├─knitr:::in_dir(input_dir(), engine(options))

     9. └─rim:::engine(options)

     10. └─maxima.env$mx$get(code[i])

     ── Error (test-execute.R:6:3): execution returns formatted strings ─────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i10) <<prompt;

     Backtrace:

     █

     1. ├─testthat::expect_match(...) test-execute.R:6:2

     2. └─rim::maxima.get("jacobian( [alpha / (alpha + beta), 1 / sqrt(alpha + beta)], [alpha, beta] )")

     3. └─maxima.env$maxima$get(command)

     ── Error (test-setformat.R:8:3): changing the output format works ──────────────

     Error: Unsupported:

     incorrect syntax: Premature termination of input at ;.

     ;

     ^

     prompt;>>(%i13) <<prompt;

     Backtrace:

     █

     1. ├─testthat::expect_match(maxima.get("2+2;"), "4") test-setformat.R:8:2

     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")

     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))

     4. └─rim::maxima.get("2+2;")

     5. └─maxima.env$maxima$get(command)

    

     [ FAIL 4 | WARN 0 | SKIP 1 | PASS 6 ]

     Error: Test failures

     Execution halted

Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.4.0

Check: whether package can be installed

Result: ERROR

    Installation failed.

Flavor: r-patched-solaris-x86

[rcst]

After a first inspection using Fedora 34 in VM the errors seem to be caused by an unfortunate reading-split of lines.

On my for example I get a read out from the socket like this:

out;>>
(
%o3) log(x)
<<out;
prompt;>>(%i4) <<prompt;

Which then fails to read the output label being used as validation in Reply$initialize(con)

39: regex(text = [...], pattern = "out;>>\\s+\\((%o(\\d+))\\)\\s\\n?([[:space:]|[:print:]]*)\\s+<<out;")

[rcst]

fixed in 541d167