@reichlab

The Reich Lab at UMass-Amherst

Pinned repositories

  1. flusight

    Influenza forecasts visualizer

    JavaScript 17 4

  2. kcde

    Kernel conditional density estimation with flexible kernel specifications.

    R 1 1

  3. reichlab.github.io

    The website for the Reich Lab @ UMass-Amherst.

    HTML 1 17

  4. adaptively-weighted-ensemble

    Code and manuscript for adaptively weighted ensembles via stacking

    HTML 5 2

  5. ALERT

    Implementation of the ALERT algorithm for detecting the onset of influenza season.

    R 5 4

  6. activemonitr

    Modeling of costs and risks of active monitoring during pandemics.

    TeX

  • The website for the Reich Lab @ UMass-Amherst.

    HTML 1 17 Apache-2.0 Updated Aug 20, 2018
  • Interactive visualization for time series forecasts

    JavaScript 7 2 MIT Updated Aug 12, 2018
  • Python GPL-3.0 Updated Aug 8, 2018
  • Influenza forecasts visualizer

    JavaScript 17 4 MIT Updated Jul 15, 2018
  • Hedging algorithms with lag

    Python GPL-3.0 Updated Jun 22, 2018
  • Command line package/script management for R based on packrat.

    R GPL-3.0 Updated Jun 15, 2018
  • MMWR Weeks for JS

    TypeScript MIT Updated May 14, 2018
  • MMWR weeks for Python

    Python 1 GPL-3.0 Updated May 14, 2018
  • Code and submissions for 2017-2018 CDC flu prediction contest

    R 1 2 Updated May 13, 2018
  • Lag aware online ensembling

    Jupyter Notebook GPL-3.0 Updated May 3, 2018
  • Dynamic weight ensembles

    Jupyter Notebook GPL-3.0 Updated Apr 14, 2018
  • Neural network based ensemble of flu prediction models.

    Jupyter Notebook GPL-3.0 Updated Apr 11, 2018
  • Node toolkit for CDC FluSight format CSVs

    TypeScript MIT Updated Apr 7, 2018
  • C++ Updated Mar 25, 2018
  • Database summary diff reporting tool

    Python GPL-3.0 Updated Feb 26, 2018
  • Scripts for working with travis across github repos

    Shell GPL-3.0 Updated Feb 16, 2018
  • The code and data required to make annual predictions for Thailand

    TeX 2 LGPL-3.0 Updated Jan 24, 2018
  • Modeling of costs and risks of active monitoring during pandemics.

    TeX GPL-2.0 Updated Jan 18, 2018
  • sarimaTD R package: SARIMA Models with Transformations and Seasonal Differencing

    R 1 Updated Dec 19, 2017
  • An R package containing functions used in the CDC Flu Forecasting competition

    R 4 GPL-3.0 Updated Oct 5, 2017
  • Code and manuscript for adaptively weighted ensembles via stacking

    HTML 5 2 GPL-3.0 Updated Aug 26, 2017
  • Article: Infectious Disease Prediction with Kernel Conditional Density Estimation.

    PostScript Updated Aug 16, 2017
  • Repository for testing prediction models with flusight

    Python GPL-3.0 Updated Jul 23, 2017
  • R package implement model stacking for models that output predictive distributions.

    R 2 GPL-3.0 Updated May 10, 2017
  • The xgboost package for gradient boosting, modified to allow inference with non-convex loss functions.

    C++ Updated Apr 25, 2017
  • R package using gradient boosting to implement model stacking for models that output predictive distributions.

    R 1 Updated Apr 14, 2017
  • Kernel conditional density estimation with flexible kernel specifications.

    R 1 1 Updated Apr 5, 2017
  • R package for simulating TSIR models.

    R 1 GPL-3.0 Updated Feb 23, 2017
  • If you clone this project, change to the root directory, and do `remake::make()` it will download time-series for Dengue in Thailand, at the moment a few things are hard-coded still.

    R Updated Feb 7, 2017
  • A Shiny app for visualizing predictions.

    R GPL-3.0 Updated Oct 7, 2016