Data Structure & Algorithms Project
Python Fortran Makefile
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charmm
development
extrastuff
helper
pdb_data
satk
xyz coord
3HHB.pdb
3MU6.pdb
3NXY.pdb
3NXY_res-renum.pdb
3QV1.pdb
COPYING
Filename.py
Final (3).pptx.pdf
Newcoordintes.py
Newcoordintes0.py
README
README.md
__init__.py
com.py
fetch.py
file1
main.py
menu-func.py
menu.py
methonine.py
name.py
pdb_addH.py
pdb_atom_renumber.py
pdb_bfactor.py
pdb_centerasu.py
pdb_centermass.py
pdb_clean.py
pdb_closecontacts.py
pdb_contact.py
pdb_contactplot.py
pdb_coulomb.py
pdb_dist-filter.py
pdb_disulfide.py
pdb_download.py
pdb_download.pyc
pdb_exper.py
pdb_iondist.py
pdb_ligand.py
pdb_moment.py
pdb_mutator.py
pdb_neighbors.py
pdb_offset.py
pdb_oligomer.py
pdb_param.py
pdb_pdb2dir.py
pdb_residue_renumber.py
pdb_sasa.py
pdb_satk.py
pdb_seq.py
pdb_seq.pyc
pdb_splitnmr.py
pdb_subset.py
pdb_torsion.py
pdb_watercontact.py
pdftofasta.py
re
related.py
related.py~
rmsd.py
rmsd.py~
test1.py
test2.py

README.md

#PROJECT PYPLOT

Thanks to RCSB, PyProt, Biostar, mySQLdb, Stack Overflow, PyMol, Python.org and of course Google.

Project PyPlot is a simple implementation of multiple libraries made using the language Python. It connects to the mySQL database and using the link in the database, downloads the pdb file and renders it in PyMol software. It further displays several information related to the protein.

P.S. All the PyProt Modules used are the standalone versions obtained from their Github Repo. A sample pdb file 3NXY.pdb is added to the repository from the RCSB PDB for testing purposes. The educational version of PyMol has been used to make and present this project.

P.P.S: For an advanced explantion: Please refer to the pdf in this repository.