OakVar: Genomic Variant Analysis Platform
Mission
- OakVar is a bridge between cutting-edge genomics research and everyday people.
- OakVar democratizes access to genomics knowledge for all.
What it does
- Annotate genomic variants with diverse annotation sources.
- Make databases of annotated variants.
- Query annotated variants with filter sets.
- Make reports in diverse formats.
- Visualize annotated variants with graphical user interface.
- Works via CLI and GUI.
- Easily develop, run, and distribute CLI and GUI genomics apps. OakVar acts as an operating system for genomics apps.
- Connect genomic data to AI/ML models.
Internship (currently full)
The main project will be OakVar. Full remote work. Unpaid position (no funding yet). Please send your application to rkim@oakbioinformatics.com.
Resources
Ready to start? OakVar Documentation
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Medium: https://medium.com/oakvar
Discord: https://discord.gg/wZfkTMKTjG
Reddit: https://www.reddit.com/r/oakvar
Email: rkim@oakbioinformatics.com
Many Thanks to Our Sponsors
Organizational Sponsors
Individual Sponsors
License
OakVar is licensed under dual licensing: 1) APGL v3 or higher and 2) paid subscription for commercial use. For full license information, see LICENSE.