extensions[ R ] breed [households household] breed [sounders sounder] breed [boars boar] breed [sows sow] breed [killed killi] households-own [ HH_income ;; hh_num ;; wealthi ;; ] sounders-own [sounder_id age scount srange ] boars-own [age ;; bcagey ;; mypsi ;; pig_num ;; prRemoved ;brange ] sows-own [age litter mypsi myqual sowLitter boarLitter pig_num scagey sounder_id prRemoved nearby-classmates ;; agentset of turtles within some specified radius closest-classmate ;; the nearest turtle stopped? ;; if the turtle hasn't moved origin ;; the turtle's original position close-classmates ;; turtles within the too-close range far-classmates ;; turtles within the too-far range total-distance-moved ;; total distance moved by the turtle previous-patch ;; patch the turtle was previously on ] patches-own [ var_cost_corn var_cost_soy var_cost_crp adj_y_corn adj_y_soy adj_y_crp boarCount sowCount sowTerritoryStrength maxPigsPerPatch owner pigcount psi psi_lastPeriod parcel_NI quality sounderTerritory sts bts boarTerritoryStrength pigTerritoryStrength damage patch_gross_margin plan_gross_margin action a_corn a_soy a_crp PatchAttractivenessPriortoLandClaim localAttractiveness localsounderTerritoryStrength notmine tempattr local-dead planPigTerritoryStrength ] globals [ ; y_corn ; y_soy ; y_crp ; epsilon ; p_corn ; p_soy ; p_crp ; vc_corn ; vc_soy ; vc_crp ; init_hh ; init_sounder ; sex_ratio ; initBoarN ; init_pigs ; allowableOverCap ; max_pigs sowCountSum boarCountSum pigCountSum killed-count ; defaultLitter ; cdecay ; minSounderN ; maxSounderN ] ;==================SETUP FUNCTIONS===================================== to setup ca random-seed 28128868 reset-ticks set-default-shape households "house" set-default-shape sows "arrow" set-default-shape boars "circle 2" setup-patches setup-seededHH setup-hh setup-landgrab setup-sounders setup-boars setup-sows set epsilon 1.19e-07 end to setup-patches ask patches [ set maxPigsPerPatch ((max_pigs / (2401 + epsilon)) + allowableOverCap) set owner -1 ;;set land as unclaimed set pigcount 0 ;;sets the pig count on a parcel at 0 set psi 0 ;;sets the initial total effective hunting effort at 0 set psi_lastPeriod 0 ;;sets initial previous period hunting effort at 0 set parcel_NI 0 set quality random-float 1 set adj_y_corn (quality * y_corn) set adj_y_soy (quality * y_soy) set adj_y_crp y_crp ] end to setup-seededHH ask n-of init_hh patches [ sprout-households 1 ] end to setup-hh ask households [ set hh_num who set wealthi 0 set label hh_num let temp hh_num ask patch-here [set owner temp set pcolor red] ; build a farmstead but you can farm here ] end to setup-landgrab while [any? patches with [owner = -1]][ ask n-of init_hh patches with [owner != -1] [ let tempowner owner if any? neighbors with [owner = -1][ ask one-of neighbors with [owner = -1] [ set owner tempowner set pcolor pcolor + 2 ] ] ] ] end to setup-sounders create-sounders init_sounder [ set age 0 set sounder_id who set scount 0 setxy random-xcor random-ycor set color 60 pd ] end to setup-boars let b round (sex_ratio * init_pigs) create-boars b [ set size 1 set color 97 set age 0 setxy random-xcor random-ycor pd ] end to setup-sows let s round (((1 - sex_ratio) * init_pigs) / init_sounder) ask sounders [ hatch-sows s [ set pig_num self set size 1 set color 136 set age 0 set xcor xcor - 0.5 + random-float 1 set ycor ycor - 0.5 + random-float 1 set origin patch-here set stopped? false set total-distance-moved 0 pd ] ] end ;================GO Functions============================================== to go census ;assess ;plan ;execute scare-pigs make-pigs move-pigs census if rule = "at-random" [ at-random ] if rule = "myopic-pmax" [ plan ] if rule = "at-random-with-uniform-removal" [ at-random-with-uniform-removal ] setPrRemoved remove-sows remove-boars count-the-dead census assess-damage set-patch-gross-margin ;realize killTheDead tick show (sentence "ticks:" ticks) if ticks > 15 [ STOP ] end to census count-sows count-boars establish-sounder-territory establish-sow-territory-strength establish-boar-territory-strength set-pig-territory-strength set pigCountSum boarCountSum + sowCountSum end to count-sows ask patches [ ifelse any? sows-here [set sowCount count sows-here] [set sowCount 0] ] set sowCountSum count sows end to count-boars ask patches [ ifelse any? boars-here [set boarCount count boars-here] [set boarCount 0] ] set boarCountSum count boars end to establish-sounder-territory if any? sounders[ ask sounders [ if any? sows with [sounder_id = [sounder_id] of myself] [ let sid sounder_id ask patches in-radius 4 [; range of 5 set sounderTerritory sid ] ] ] ] end to establish-sow-territory-strength ask patches [ if any? sows [ let sh count sows-here let s1 count sows in-radius 1 let s2 count sows in-radius 2 let s3 count sows in-radius 3 let s4 count sows in-radius 4 let s5 count sows in-radius 5 set sts (sh + s1 - sh * (1 / 4) + s2 - s1 * (1 / 8) + s3 - s2 * (1 / 16) + s4 - s3 * (1 / 32) + s5 - s4 * (1 / 64)) ] set sowTerritoryStrength sts set sts 0 ] end to establish-boar-territory-strength ask patches[ if any? boars [ let bh count boars-here let b1 count boars in-radius 1 let b2 count boars in-radius 2 let b3 count boars in-radius 3 let b4 count boars in-radius 4 let b5 count boars in-radius 5 set bts (bh + (b1 - bh) * (1 / 4) + (b2 - b1) * (1 / 8) + (b3 - b2) * (1 / 16) + (b4 - b3) * (1 / 32) + (b5 - b4) * (1 / 64)) ] set boarTerritoryStrength bts set bts 0 ] end to set-pig-territory-strength ask patches [ set pigTerritoryStrength (boarTerritoryStrength + sowTerritoryStrength + epsilon) ] end to set-patch-gross-margin ask patches [ set action round (planPigTerritoryStrength * psi) set patch_gross_margin (a_corn * ((p_corn * adj_y_corn * (1 - (0.9 + (-0.899) / (1 + ((pigTerritoryStrength) / 14.21) ^ 5))) - vc_corn - (7837 * action - 5303 * action ^ 2))) + a_soy * (p_soy * adj_y_soy * (1 - (0.9 + (-0.899) / (1 + ((pigTerritoryStrength) / 14.21) ^ 5))) - vc_soy - (7837 * action - 5303 * action ^ 2)) + a_crp * (p_crp * adj_y_crp - vc_crp - (7837 * action - 5303 * action ^ 2))) ] end to scare-pigs if any? sows [ ask sows [ set scagey cdecay * scagey + [psi_lastPeriod] of patch-here set myqual [quality] of patch-here show scagey ] ] if any? boars [ ask boars [ set bcagey cdecay * bcagey + [1 / 2 * psi_lastPeriod] of patch-here show bcagey ] ] end to make-pigs ask sows [ set litter ((1 - pigCountSum / (max_pigs)) * defaultLitter) * (myqual - scagey) ifelse litter > 0 [ set litter litter ] [set litter 0 ] set boarLitter round (litter * sex_ratio + random-float 0.5 ) set sowLitter round (litter * (1 - sex_ratio) + random-float 0.5 ) hatch-boars boarLitter [set age 0] hatch sowLitter [set age 0] ] end to prepareToMove ; land desirability is ;inversely related to population ;inversely related to pressure ;inversely related to other sounder's territory strength ;positively related to quality ask patches[ ; find patch populations, set as proportion to full capacity ; establish attractiveness pre-land claim (additive) ifelse (boarCount + sowCount) < 1 [set tempattr (1 + quality)] [set tempattr ((1 / (boarCount + sowCount + 1)) + quality)] ;let tempattr ((1 / x) + (z)) ; recall psi t-1 let y psi_lastPeriod ifelse y < 0.01 ; inverse epsilon small numbers are very big and that is ;nonsense anyway [set PatchAttractivenessPriortoLandClaim tempattr] [set PatchAttractivenessPriortoLandClaim (tempattr + (1 / y))] ] end to move-sounders if any? sounders [ ;set over-all attractiveness of patches prepareToMove ;set current territory ;evaluate attractiveness for each sounder ;sounders move ask sounders [ let tempPig sounder_id ask patches in-radius srange [ let nm (int sounderTerritory - int tempPig) ^ 2 ifelse nm > 0 [set notmine 1][set notmine 0] set localsounderTerritoryStrength pigTerritoryStrength * notmine set localAttractiveness (PatchAttractivenessPriortoLandClaim - localsounderTerritoryStrength) ;if localAttractiveness < 0.001 [set localAttractiveness 0] ] if any? patches in-radius srange with [localAttractiveness >= [localAttractiveness] of myself][ ;[move-to one-of neighbors with [localAttractiveness >= [localAttractiveness] of myself] let ideal-site max-one-of patches in-radius srange [localAttractiveness] move-to ideal-site ;move sows to sounder (to be dispersed) if any? sows with [sounder_id = [sounder_id] of myself] [ ask sows with [sounder_id = [sounder_id] of myself] [move-to one-of patches with [tempPig = [sounder_id] of myself] ] ] ] ] ] end to move-sows if any? sows [ ask sows [ set previous-patch patch-here set close-classmates other sows in-radius too-close set far-classmates other sows in-radius too-far ifelse any? close-classmates ; move to an open space [ facexy (mean [xcor] of close-classmates) (mean [ycor] of close-classmates) rt 180 fd step-size set stopped? false ] [ ifelse not any? far-classmates ; move to a more populated space in the 'room' [ facexy mean [xcor] of other sows mean [ycor] of other sows fd step-size set stopped? false ] [ set stopped? true ] ] set total-distance-moved (total-distance-moved + (distance previous-patch)) ] ] end to move-boars if any? boars [ ask boars [ let b brange ask patches in-radius brange [ set localsounderTerritoryStrength pigTerritoryStrength set localAttractiveness (PatchAttractivenessPriortoLandClaim - localsounderTerritoryStrength) if localAttractiveness < 0.001 [set localAttractiveness 0] ] if any? patches in-radius brange with [localAttractiveness >= [localAttractiveness] of myself] [ ; [move-to one-of neighbors with [localAttractiveness >= [localAttractiveness] of myself]] let ideal-site one-of patches in-radius brange with [localAttractiveness >= [localAttractiveness] of myself] move-to ideal-site ] ] ] end to small-sounder if any? sounders [ ask sounders [ set scount count sows with [sounder_id = [sounder_id] of self] ] if any? sounders with [scount < minSounderN] [ ask sows with [sounder_id = [sounder_id] of self] [ set sounder_id [sounder_id] of min-one-of (other turtles) [ distance myself] ] ] ask sounders [ set scount count sows with [sounder_id = [sounder_id] of myself] if scount < 1 [die] ] ] end to big-sounder if any? sounders [ let zz (maxSounderN + ALLOWABLEOVERCAP) ask sounders [ set scount count sows with [sounder_id = [sounder_id] of myself] if scount > zz [ let oldme who hatch-sounders 1 [ set age 0 set sounder_id who let sid sounder_id let op scount - zz ask n-of op sows with [sounder_id = oldme] [ set sounder_id sid ] ] ] ] ] end to move-pigs ; land desirability is ;inversely related to population ;inversely related to pressure ;inversely related to other sounder's territory strength ;positively related to quality census ; count and claim prepareToMove move-sounders ; move-sows ;temporarily disable individual sow movement move-boars small-sounder big-sounder end to plan ask patches [ set planPigTerritoryStrength pigTerritoryStrength ;clear R r:clearLocal r:gc ;load GAMS r:eval "library(gdxrrw)" ; initialize GAMS libraries r:eval "igdx('')" ; pull in parameter values from initial GAMS file r:eval "gdxs <- 'start.gdx'" r:eval "k <- rgdx.set(gdxs,'k')" r:eval "P <- rgdx.param(gdxs,'P')" r:eval "Yield <- rgdx.param(gdxs,'Yield')" r:eval "VC <- rgdx.param(gdxs,'VC')" r:eval "initPigs <- rgdx.scalar(gdxs,'initPigs')" ; send updated parameter values from NetLogo to R r:put "p_c" p_corn r:put "p_s" p_soy r:put "p_cr" p_crp r:put "c_c" vc_corn r:put "c_s" vc_soy r:put "c_cr" vc_crp r:put "ayc" adj_y_corn r:put "ays" adj_y_soy r:put "aycr" adj_y_crp r:put "pts" pigTerritoryStrength ; replace initial GAMS parameter values with updated parameter values from NetLogo r:eval "P[1,2] <- p_c" r:eval "P[2,2] <- p_s" r:eval "P[3,2] <- p_cr" r:eval "VC[1,2] <- c_c" r:eval "VC[2,2] <- c_s" r:eval "VC[3,2] <- c_cr" r:eval "Yield[1,2] <- ayc" r:eval "Yield[2,2] <- ays" r:eval "Yield[3,2] <- aycr" r:eval "initPigs[] <- pts" ; update the GDX file r:eval "wgdx.lst('inputs.gdx',list(P2,Yield,VC,initPigs))" ; solve in GAMS r:eval "gams('/mnt/max_pi.gms --INPUT /mnt/inputs.gdx')" ; pull solver results into R r:eval "z <- rgdx('results.gdx',list(name = 'z'),squeeze = F)" r:eval "use <- rgdx('results.gdx',list(name = 'use'),squeeze = F)" r:eval "psi <- rgdx('results.gdx',list(name = 'psi'),squeeze = F)" ; pull solver results from R to NetLogo set plan_gross_margin r:get "z$val[,]" set a_corn r:get "use$val[1,2]" set a_soy r:get "use$val[2,2]" set a_crp r:get "use$val[3,2]" set psi r:get "psi$val[,]" ;make sure results file is always new r:eval "system('rm /mnt/results.gdx')" r:stop ] end to setPrRemoved if any? boars [ ask boars [ set mypsi [psi] of patch-here set prRemoved (mypsi - mypsi * bcagey) ] ] if any? sows [ ask sows [ set mypsi [psi] of patch-here set prRemoved (mypsi - mypsi * scagey) ] ] show (sentence "prRemoved updated") end to assess-damage ask patches [ ifelse pigTerritoryStrength > 0 [ set damage (0.9 + (-0.899) / (1 + (pigTerritoryStrength / 14.21) ^ 5)) ] [set damage 0 ] ] show (sentence "damage assessed") end to count-the-dead ask patches [ ifelse any? killed-here [set local-dead count killed-here] [set local-dead 0] ] set killed-count count killed show (sentence "dead counted:" killed-count) end to remove-sows if any? sows[ ask sows[ let rn random-float 1.0 show (sentence "prRemoved" prRemoved "scagey" scagey "rn" rn) if rn < prRemoved [ hatch-killed 1 [ht] die ] ] ] end to remove-boars if any? boars[ ask boars [ let rn random-float 1.0 show (sentence "prRemoved" prRemoved "bcagey" bcagey "rn" rn) if rn < prRemoved [ hatch-killed 1 [ht] die ] ] ] end to killTheDead if any? boars [ask boars [set age age + 1]] if any? sows [ ask sows [set age age + 1]] if any? sounders [ask sounders [set age age + 1]] if any? killed [ask killed [die]] ask patches [ set psi_lastPeriod psi set psi 0 ] show (sentence "killTheDead") end ;==========random/uniform assignment of removal activities============== to at-random-with-uniform-removal ask patches[ set planPigTerritoryStrength pigTerritoryStrength let choices int random 2 if choices = 0 [ set a_corn 1 set a_soy 0 set a_crp 0 set psi uniform_removal ] if choices = 1 [ set a_corn 0 set a_soy 1 set a_crp 0 set psi uniform_removal ] if choices = 2 [ set a_corn 0 set a_soy 0 set a_crp 1 set psi uniform_removal ] ] end ;==========random assignment of activities======================= to at-random ask patches[ set planPigTerritoryStrength pigTerritoryStrength let choices int random 2 if choices = 0 [ set a_corn 1 set a_soy 0 set a_crp 0 set psi random-float 1 ] if choices = 1 [ set a_corn 0 set a_soy 1 set a_crp 0 set psi random-float 1 ] if choices = 2 [ set a_corn 0 set a_soy 0 set a_crp 1 set psi random-float 1 ] ] end @#$#@#$#@ GRAPHICS-WINDOW 82 18 531 468 -1 -1 9.0 1 10 1 1 1 0 1 1 1 0 48 -48 0 0 0 1 ticks 30.0 BUTTON 19 19 82 52 setup setup NIL 1 T OBSERVER NIL NIL NIL NIL 1 INPUTBOX 530 17 685 77 y_corn 1500.0 1 0 Number INPUTBOX 530 76 685 136 y_soy 400.0 1 0 Number INPUTBOX 531 136 685 196 y_crp 10.0 1 0 Number INPUTBOX 839 17 993 77 epsilon 1.19E-7 1 0 Number INPUTBOX 531 196 685 256 p_corn 4.0 1 0 Number INPUTBOX 531 255 685 315 p_soy 10.0 1 0 Number INPUTBOX 530 315 685 375 p_crp 100.0 1 0 Number INPUTBOX 530 375 685 435 vc_corn 100.0 1 0 Number INPUTBOX 530 434 685 494 vc_soy 100.0 1 0 Number INPUTBOX 530 493 685 553 vc_crp 1.0 1 0 Number INPUTBOX 685 435 840 495 init_hh 45.0 1 0 Number INPUTBOX 685 376 840 436 init_sounder 5.0 1 0 Number INPUTBOX 685 493 840 553 sex_ratio 0.5 1 0 Number INPUTBOX 840 236 995 296 init_pigs 100.0 1 0 Number INPUTBOX 839 298 994 358 allowableOverCap 10.0 1 0 Number INPUTBOX 838 362 993 422 max_pigs 1500.0 1 0 Number INPUTBOX 685 17 840 77 defaultLitter 8.0 1 0 Number INPUTBOX 685 77 840 137 cdecay 0.25 1 0 Number INPUTBOX 685 136 840 196 minSounderN 5.0 1 0 Number INPUTBOX 685 196 840 256 maxSounderN 20.0 1 0 Number BUTTON 19 52 82 85 go go T 1 T OBSERVER NIL NIL NIL NIL 1 INPUTBOX 685 256 840 316 pig_range 20.0 1 0 Number INPUTBOX 685 316 840 376 brange 10.0 1 0 Number MONITOR 188 469 293 514 NIL count boars 17 1 11 MONITOR 291 469 397 514 NIL count sounders 17 1 11 MONITOR 83 469 188 514 NIL count sows 17 1 11 SLIDER 839 77 993 110 too-close too-close 0.1 5 1.1 1 1 NIL HORIZONTAL SLIDER 839 110 993 143 too-far too-far 0.1 5 4.1 1 1 NIL HORIZONTAL SLIDER 840 143 993 176 step-size step-size 0.1 2 1.0 .1 1 NIL HORIZONTAL INPUTBOX 841 176 994 236 uniform_removal 0.5 1 0 Number TEXTBOX 861 497 1011 567 Available Rules\n\"at-random\"\n\"myopic-pmax\"\n\"at-random-with-uniform-removal\" 11 0.0 1 INPUTBOX 838 421 1067 481 rule NIL 1 0 String @#$#@#$#@ ## WHAT IS IT? (a general understanding of what the model is trying to show or explain) ## HOW IT WORKS (what rules the agents use to create the overall behavior of the model) ## HOW TO USE IT (how to use the model, including a description of each of the items in the Interface tab) ## THINGS TO NOTICE (suggested things for the user to notice while running the model) ## THINGS TO TRY (suggested things for the user to try to do (move sliders, switches, etc.) with the model) ## EXTENDING THE MODEL (suggested things to add or change in the Code tab to make the model more complicated, detailed, accurate, etc.) ## NETLOGO FEATURES (interesting or unusual features of NetLogo that the model uses, particularly in the Code tab; or where workarounds were needed for missing features) ## RELATED MODELS (models in the NetLogo Models Library and elsewhere which are of related interest) ## CREDITS AND REFERENCES (a reference to the model's URL on the web if it has one, as well as any other necessary credits, 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124 240 105 225 105 210 105 Polygon -10899396 true false 105 90 75 75 55 75 40 89 31 108 39 124 60 105 75 105 90 105 Polygon -10899396 true false 132 85 134 64 107 51 108 17 150 2 192 18 192 52 169 65 172 87 Polygon -10899396 true false 85 204 60 233 54 254 72 266 85 252 107 210 Polygon -7500403 true true 119 75 179 75 209 101 224 135 220 225 175 261 128 261 81 224 74 135 88 99 wheel false 0 Circle -7500403 true true 3 3 294 Circle -16777216 true false 30 30 240 Line -7500403 true 150 285 150 15 Line -7500403 true 15 150 285 150 Circle -7500403 true true 120 120 60 Line -7500403 true 216 40 79 269 Line -7500403 true 40 84 269 221 Line -7500403 true 40 216 269 79 Line -7500403 true 84 40 221 269 wolf false 0 Polygon -16777216 true false 253 133 245 131 245 133 Polygon -7500403 true true 2 194 13 197 30 191 38 193 38 205 20 226 20 257 27 265 38 266 40 260 31 253 31 230 60 206 68 198 75 209 66 228 65 243 82 261 84 268 100 267 103 261 77 239 79 231 100 207 98 196 119 201 143 202 160 195 166 210 172 213 173 238 167 251 160 248 154 265 169 264 178 247 186 240 198 260 200 271 217 271 219 262 207 258 195 230 192 198 210 184 227 164 242 144 259 145 284 151 277 141 293 140 299 134 297 127 273 119 270 105 Polygon -7500403 true true -1 195 14 180 36 166 40 153 53 140 82 131 134 133 159 126 188 115 227 108 236 102 238 98 268 86 269 92 281 87 269 103 269 113 x false 0 Polygon -7500403 true true 270 75 225 30 30 225 75 270 Polygon -7500403 true true 30 75 75 30 270 225 225 270 @#$#@#$#@ NetLogo 6.1.0 @#$#@#$#@ @#$#@#$#@ @#$#@#$#@ @#$#@#$#@ @#$#@#$#@ default 0.0 -0.2 0 0.0 1.0 0.0 1 1.0 0.0 0.2 0 0.0 1.0 link direction true 0 Line -7500403 true 150 150 90 180 Line -7500403 true 150 150 210 180 @#$#@#$#@ 0 @#$#@#$#@