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Berkeley Institute for Data Science (BIDS)
- Berkeley, CA
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numpy Public
Forked from numpy/numpy
The fundamental package for scientific computing with Python.
Python 1
-
numpy-tutorials Public
Forked from numpy/numpy-tutorials
NumPy tutorials & educational content in notebook format
Python
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-
nx-guides Public
Forked from networkx/nx-guides
Examples and IPython Notebooks about NetworkX
Jupyter Notebook
1,318 contributions in the last year
Activity overview
Contribution activity
June 2022
Created 52 commits in 6 repositories
Created a pull request in networkx/networkx that received 5 comments
Add validation for distance kwarg in closeness_centrality.
Closes #3880
Validates that at least one edge in the graph has the distance
parameter as an attribute in the case when distance
is provided by the …
Opened 25 other pull requests in 6 repositories
networkx/networkx
18
merged
1
open
- Modify DAG example to show topological layout.
- Add warning to nx_agraph about layout nondeterminism.
- Update distance parameter description.
- Temporary fix for failing tests w/ scipy1.9.
-
Rm
to_numpy_recarray
- Add example of topo_order kwarg to dag_longest_path
- Add durations flag to coverage run on CI.
- Revert "Add workaround for pytest failures on 3.11b2"
- Default to lightmode for documentation
- Update simple_cycles docstring w/ yields and examples
- Touchups to MG and MDG edges docstrings.
- Check that nodes have "pos" attribute in geometric_edges
- Recover order of layers in multipartite_layout when layers are sortable
- Add default value p=2 for minkowski distance metric.
-
Update multigraph docstrings to reflect
remove_edges_from
behavior. - Add docstring example for attr transfer to linegraph.
- Add initial_graph parameter to scale_free_graph and deprecate create_using
- Update ISMAGS.analyze_symmetry docstring.
- Add workaround for pytest failures on 3.11b2
numpy/numpy-tutorials
2
open
scipy/scipy
1
merged
pygraphviz/pygraphviz
1
open
networkx/nx-guides
1
merged
kpetridis24/blog.scientific-python.org
1
merged
Reviewed 90 pull requests in 8 repositories
networkx/networkx
25 pull requests
-
Add keyword argument to
nx.ancestors
&nx.descendants
- DOC: Rst syntax update.
- Clean up similarity.py and use dataclasses for storing state
- New algorithm for ranking spanning arborescences for (#4322)
- Implement directed edge swap
- Check that nodes have "pos" attribute in geometric_edges
- Pydot layout fix
- Remove deprecated n_communities argument from greedy_modularity_communities
- Add more comprehensive tests for pydot
- Remove deprecated function nx.info
- Fix typo in bipartite closeness_centrality and thought-o in tests
- Test out explicit paths while installing pygraphviz in macOS
-
Compute
is_strongly_connected
lazily -
Compute
is_weakly_connected
lazily - Remove copy methods for Filter* coreviews
- Updated astar docstring
- Naive lowest common ancestor implementation
- remove old attr keyword from json_graph/tree
- Remove generate_unique_node
- Remove unused deprecated argument from to_pandas_edgelist
- Remove coverage and performance from quality
- Replace node_classification subpackage with a module
- Remove gpickle
- Make pagerank numpy and scipy private functions
- Make HITS numpy and scipy private functions
- Some pull request reviews not shown.
numpy/numpy
7 pull requests
- DOC: Mention uniform in the np.random.Generator.random function.
- DOC: dark theme css rules
- DOC: Fixed minor typo in reference
- BUG: Reject non integer array-likes with size 1 in delete
- DOC: Update the docstring for np.around
- MAINT: fix typo in string_ufuncs.cpp
- TST: Enable doctests in IO Howto with testsetup and testcleanup
networkx/nx-guides
5 pull requests
scipy/scipy
1 pull request
numpy/numpy-tutorials
1 pull request
scientific-python/scientific-python.org
1 pull request
scientific-python/blog.scientific-python.org
1 pull request
scientific-python/devstats.scientific-python.org
1 pull request
Created an issue in scipy/scipy that received 10 comments
BUG: linprog failure - OptimizeResult.x returns NoneType
Describe your issue.
NetworkX is seeing a regression in scipy-1.9.0rc1 in scipy.optimize.linprog
. Comparing the OptimizeResult.x
attribute to an in…
Opened 16 other issues in 6 repositories
networkx/networkx
9
open
2
closed
-
Potential deprecation:
pygraphviz_layout
andgraphviz_layout
are the same function -
Update documentation surrounding
union
,disjoint_union
,compose
andGraph.update
-
Review the
.update
method of graph classes -
remove_edges_from
behavior for MultiGraphs - Project Idea: Visual map of functionality available in NetworkX
- API consistency between bipartite/non-bipartite matching algorithms.
- Held-Karp ascent failures due to optimize.linprog infeasibility
- Improve testing for directed_edge_swap
-
Should
_hits_scipy
be removed? -
node_link
functionsattrs
kwarg - Heads up: Latest documentation now uses dark mode by default depending on browser defaults