From e636236f0e286e9df87b365a0ce0f05ad645a16c Mon Sep 17 00:00:00 2001 From: Jackson Tsuji Date: Thu, 7 Apr 2022 23:55:38 +0900 Subject: [PATCH] Temp files --- rules/toyako.smk | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/rules/toyako.smk b/rules/toyako.smk index 267216d..ba22055 100644 --- a/rules/toyako.smk +++ b/rules/toyako.smk @@ -335,7 +335,7 @@ rule prepare_medaka_polish_input: input: "assembly/assembly.fasta" output: - "polish/medaka_input/input.fasta" + temp("polish/medaka_input/input.fasta") run: source_relpath = os.path.relpath(str(input),os.path.dirname(str(output))) os.symlink(source_relpath,str(output)) @@ -820,7 +820,7 @@ rule prepare_medaka_circularize_input: input: "circularize/circlator/rotated.fasta" output: - "circularize/medaka_input/input.fasta" + temp("circularize/medaka_input/input.fasta") run: source_relpath = os.path.relpath(str(input),os.path.dirname(str(output))) os.symlink(source_relpath,str(output))