{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":178070025,"defaultBranch":"master","name":"tileseqMave","ownerLogin":"rothlab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2019-03-27T20:29:43.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/1645800?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1696262851.0","currentOid":""},"activityList":{"items":[{"before":"bf68f9b2b6f9d6b3761b144802cf8ea065e0aead","after":"13e486ac3cc3867041da1dc5ba1427e2253cbf4d","ref":"refs/heads/master","pushedAt":"2024-04-01T14:16:26.000Z","pushType":"pr_merge","commitsCount":7,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"Merge pull request #120 from rothlab/dev\n\nMutcount fixes for PhiX calibration","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2203199667\" data-permission-text=\"Title is private\" data-url=\"https://github.com/rothlab/tileseqMave/issues/120\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/rothlab/tileseqMave/pull/120/hovercard\" href=\"https://github.com/rothlab/tileseqMave/pull/120\">#120</a> from rothlab/dev"}},{"before":"c1c35dd02a4d7d0707228ab9218a2250ab357a86","after":"7aa2fe291661a3a6dfdf845825a7e64c7df4e972","ref":"refs/heads/dev","pushedAt":"2024-03-21T15:25:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"phix sam files must be named Undetermined","shortMessageHtmlLink":"phix sam files must be named Undetermined"}},{"before":"7db36e15e95ddd64df6a250e7f92a19097686d00","after":"c1c35dd02a4d7d0707228ab9218a2250ab357a86","ref":"refs/heads/dev","pushedAt":"2024-03-20T16:04:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"fix mutcount: define refdir if phix is enabled but alignments are skipped","shortMessageHtmlLink":"fix mutcount: define refdir if phix is enabled but alignments are ski…"}},{"before":"c1281d6c75f6b2b51925962abd4bd6661e7ed7ee","after":"7db36e15e95ddd64df6a250e7f92a19097686d00","ref":"refs/heads/dev","pushedAt":"2024-03-20T15:57:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"fix mutcount: re-define phixFasta position and re-download if necessary","shortMessageHtmlLink":"fix mutcount: re-define phixFasta position and re-download if necessary"}},{"before":"1b30c556f7392140c396efd143d2134dfccf26d3","after":"c1281d6c75f6b2b51925962abd4bd6661e7ed7ee","ref":"refs/heads/dev","pushedAt":"2024-03-20T15:48:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"fix mutcount: calibratePhred needs phix fasta","shortMessageHtmlLink":"fix mutcount: calibratePhred needs phix fasta"}},{"before":"5992cc8bd6fcf63162671034a8753dd7d7d268ef","after":"1b30c556f7392140c396efd143d2134dfccf26d3","ref":"refs/heads/dev","pushedAt":"2024-03-20T15:17:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"fix findFailedCalibrations","shortMessageHtmlLink":"fix findFailedCalibrations"}},{"before":"8c04c173d83c5e47640695a98de7cfcfec748b5d","after":"5992cc8bd6fcf63162671034a8753dd7d7d268ef","ref":"refs/heads/dev","pushedAt":"2024-03-19T15:01:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"fix phix sample ids","shortMessageHtmlLink":"fix phix sample ids"}},{"before":"0db650d317181380563dc702b54b6670d673ab84","after":"bf68f9b2b6f9d6b3761b144802cf8ea065e0aead","ref":"refs/heads/master","pushedAt":"2024-02-26T18:53:59.000Z","pushType":"pr_merge","commitsCount":8,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"Merge pull request #119 from rothlab/dev\n\nv1.3.1","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2154803199\" data-permission-text=\"Title is private\" data-url=\"https://github.com/rothlab/tileseqMave/issues/119\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/rothlab/tileseqMave/pull/119/hovercard\" href=\"https://github.com/rothlab/tileseqMave/pull/119\">#119</a> from rothlab/dev"}},{"before":"03c9ae9867ed32badeb9a91ce584875ba7de52c5","after":"8c04c173d83c5e47640695a98de7cfcfec748b5d","ref":"refs/heads/dev","pushedAt":"2024-02-26T17:54:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"adapt referenceSets to changed clinvar service data structure","shortMessageHtmlLink":"adapt referenceSets to changed clinvar service data structure"}},{"before":"b39fb1588ca34d505f96e0ae99b8ad5d3aa745b6","after":"03c9ae9867ed32badeb9a91ce584875ba7de52c5","ref":"refs/heads/dev","pushedAt":"2024-02-21T19:32:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"fix regularizationQC breaking upon missing replicated","shortMessageHtmlLink":"fix regularizationQC breaking upon missing replicated"}},{"before":"a5e2cc79cd43dc94cf4a2007a6fe09ef6ed017b0","after":"b39fb1588ca34d505f96e0ae99b8ad5d3aa745b6","ref":"refs/heads/dev","pushedAt":"2024-02-16T20:44:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"mutcount dev","shortMessageHtmlLink":"mutcount dev"}},{"before":"6231bf6121474a84b14844394b249c3a17f3ed65","after":"a5e2cc79cd43dc94cf4a2007a6fe09ef6ed017b0","ref":"refs/heads/dev","pushedAt":"2024-02-13T14:40:37.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"merge changes in mutcount","shortMessageHtmlLink":"merge changes in mutcount"}},{"before":"1ee915822bfdf73ddea2a7744103c34296be12f9","after":"6231bf6121474a84b14844394b249c3a17f3ed65","ref":"refs/heads/dev","pushedAt":"2024-02-12T20:50:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"mutcount dev","shortMessageHtmlLink":"mutcount dev"}},{"before":"e62339f4a271e8fcda3235cc9260660f2f260c33","after":"1ee915822bfdf73ddea2a7744103c34296be12f9","ref":"refs/heads/dev","pushedAt":"2023-12-13T19:48:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"drawPRC unflip score labels","shortMessageHtmlLink":"drawPRC unflip score labels"}},{"before":"00410e1fe851dadec5d819e84830171fde1f53aa","after":"0db650d317181380563dc702b54b6670d673ab84","ref":"refs/heads/master","pushedAt":"2023-12-13T18:41:33.000Z","pushType":"pr_merge","commitsCount":14,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"Merge pull request #116 from rothlab/dev\n\nDev","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2040252013\" data-permission-text=\"Title is private\" data-url=\"https://github.com/rothlab/tileseqMave/issues/116\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/rothlab/tileseqMave/pull/116/hovercard\" href=\"https://github.com/rothlab/tileseqMave/pull/116\">#116</a> from rothlab/dev"}},{"before":"3f72d4bb1dd10c5fd96d31bd41a81326cab7c7c4","after":"e62339f4a271e8fcda3235cc9260660f2f260c33","ref":"refs/heads/dev","pushedAt":"2023-12-13T18:37:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"selfupdate also updates tsm","shortMessageHtmlLink":"selfupdate also updates tsm"}},{"before":"65a848ee8e863a90d152612417420e57ed270dda","after":"3f72d4bb1dd10c5fd96d31bd41a81326cab7c7c4","ref":"refs/heads/dev","pushedAt":"2023-12-13T18:25:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"remove test line","shortMessageHtmlLink":"remove test line"}},{"before":"44171d5f84e639f59c2d9c053a415caceb762cad","after":"65a848ee8e863a90d152612417420e57ed270dda","ref":"refs/heads/dev","pushedAt":"2023-12-13T16:43:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"version bump 1.3","shortMessageHtmlLink":"version bump 1.3"}},{"before":"06b1c7db3caaa15089808f5c830bce0733d2ac0a","after":"44171d5f84e639f59c2d9c053a415caceb762cad","ref":"refs/heads/dev","pushedAt":"2023-12-13T16:41:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"mutcount logo","shortMessageHtmlLink":"mutcount logo"}},{"before":"d437a8fbea2ad96aeca87d4cab504e717e5c24ed","after":"06b1c7db3caaa15089808f5c830bce0733d2ac0a","ref":"refs/heads/dev","pushedAt":"2023-12-12T21:25:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"mutcount devel","shortMessageHtmlLink":"mutcount devel"}},{"before":"53e3dcfebd7706d27bd2b45fc10f963226205aa6","after":"d437a8fbea2ad96aeca87d4cab504e717e5c24ed","ref":"refs/heads/dev","pushedAt":"2023-12-07T21:30:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"more mutcount devel","shortMessageHtmlLink":"more mutcount devel"}},{"before":"de734485b7419732a6e8b93b9748078c146e545c","after":"53e3dcfebd7706d27bd2b45fc10f963226205aa6","ref":"refs/heads/dev","pushedAt":"2023-12-01T20:51:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"mutcount devel","shortMessageHtmlLink":"mutcount devel"}},{"before":"93692d0158a7044ef5b8ef26928a8f2a8fe9994b","after":"de734485b7419732a6e8b93b9748078c146e545c","ref":"refs/heads/dev","pushedAt":"2023-12-01T20:01:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"make scripts executable","shortMessageHtmlLink":"make scripts executable"}},{"before":"9bc2e4667d011fee23842a4fa6b1eae58dfe7f85","after":"93692d0158a7044ef5b8ef26928a8f2a8fe9994b","ref":"refs/heads/dev","pushedAt":"2023-12-01T19:22:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"update tsm to support bash scripts","shortMessageHtmlLink":"update tsm to support bash scripts"}},{"before":"150ffaa1799c315eacc8769f1b34b751af373dd9","after":"9bc2e4667d011fee23842a4fa6b1eae58dfe7f85","ref":"refs/heads/dev","pushedAt":"2023-11-30T21:11:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"more mutcount dev","shortMessageHtmlLink":"more mutcount dev"}},{"before":"564de03161e91efd422131d15d2b3fc7c18f0665","after":"150ffaa1799c315eacc8769f1b34b751af373dd9","ref":"refs/heads/dev","pushedAt":"2023-11-23T21:38:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"more mutcount dev","shortMessageHtmlLink":"more mutcount dev"}},{"before":"3697ba26b170cb206969797633d1c049482fac95","after":"564de03161e91efd422131d15d2b3fc7c18f0665","ref":"refs/heads/dev","pushedAt":"2023-11-10T20:42:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"more mutcount dev","shortMessageHtmlLink":"more mutcount dev"}},{"before":"3e30d5ffe2c2632eb146926e2414eab5e7eaccca","after":"3697ba26b170cb206969797633d1c049482fac95","ref":"refs/heads/dev","pushedAt":"2023-11-10T14:53:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"stub for mutcount","shortMessageHtmlLink":"stub for mutcount"}},{"before":"32051914cc7cab59b488cfe4a9aa5a8c27a6c097","after":"00410e1fe851dadec5d819e84830171fde1f53aa","ref":"refs/heads/master","pushedAt":"2023-10-25T20:50:02.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"Merge pull request #115 from rothlab/dev\n\nmavevis updates","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"1962204763\" data-permission-text=\"Title is private\" data-url=\"https://github.com/rothlab/tileseqMave/issues/115\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/rothlab/tileseqMave/pull/115/hovercard\" href=\"https://github.com/rothlab/tileseqMave/pull/115\">#115</a> from rothlab/dev"}},{"before":"7018ca4f5047dd2a55db91f34238c2dce0d07780","after":"3e30d5ffe2c2632eb146926e2414eab5e7eaccca","ref":"refs/heads/dev","pushedAt":"2023-10-25T20:47:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jweile","name":"Jochen Weile","path":"/jweile","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31638122?s=80&v=4"},"commit":{"message":"pdb offset support, alphafold support, override cache for pdb","shortMessageHtmlLink":"pdb offset support, alphafold support, override cache for pdb"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEJIsIWwA","startCursor":null,"endCursor":null}},"title":"Activity · rothlab/tileseqMave"}