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; Some settings inspired by
; Prevent conflict with shift-dir keys for switching buffer
; The config variable used to be org-CUA-compatible.
(setq org-replace-disputed-keys t)
; Activate org-protocol to that we can access org from external programs.
;(require 'org-protocol)
; Start org-mode for .org files.
(add-to-list 'auto-mode-alist '("\\.\\(org\\|org_archive\\)$" . org-mode))
; Custom settings in org-mode
(add-hook 'org-mode-hook
(lambda ()
; yasnippet
; (condition-case nil (progn
; (make-variable-buffer-local 'yas/trigger-key)
; (setq yas/trigger-key [tab])
; (define-key yas/keymap [tab] 'yas/next-field-group))
; (error (message "Yasnippet not found.")))
; flyspell for automatic spell checking
(flyspell-mode 1)))
; Remember old clocks
(setq org-clock-history-length 10)
; Make the clock persist across sessions
(setq org-clock-persist t)
; Restart clock from old time if there is an open clock line.
(setq org-clock-in-resume t)
; Clear out zero-time clocks.
(setq org-clock-out-remove-zero-time-clocks t)
; Keep the clock running on the remember item.
(setq org-remember-clock-out-on-exit nil)
;; Don't clock out when moving task to a done state.
(setq org-clock-out-when-done nil)
(setq org-clock-modeline-total 'current)
; Timestamp done TODO items.
(setq org-log-done t)
(define-key global-map "\C-cl" 'org-store-link)
(define-key global-map "\C-ca" 'org-agenda)
; Make latex preview white on black to match the color theme.
; XXX: Color theme tends to vary, this assumes it's always black background.
; Values should be picked from current color theme.
(setq org-format-latex-options
'(:foreground "White" :background "Black" :scale 1.2
:matchers ("begin" "$" "$$" "\\(" "\\[")))
; Require braces for subscripts and superscripts, fixes the annoying
; subscript-itis from underscores in regular text.
(setq org-export-with-sub-superscripts '{})
; Setup the sequence of org-mode todo keywords.
; TODO: Tasks you know how to finish, can be finished in a single day and you
; are actively committed to finish.
; NEXT: Imminent tasks, things that you will work on today.
; FIXME: Broken things that need fixing.
; STARTED: Tasks you have started working on or tasks that are always ongoing
; such as following the news and answering email.
; WAITING: Tasks that can't be started before something else happens. Should
; explain what they're waiting on in the task text.
; SOMEDAY: Tasks you aren't actively committed to finish them. "I'll do it
; someday, maybe."
; DROPPED: Dropped out of the list due to lack of interest instead of being
; cancelled for a particular good reason.
; CANCELED: Canceled tasks. Should explain why the task was canceled.
; DONE: Finished tasks.
; NOTE: Non-task things that'll show up in the agenda
(setq org-todo-keywords
'((sequence "TODO(t)" "NEXT(n)" "STARTED(s)" "|" "DONE(d)")
(sequence "WAITING(w)" "SOMEDAY(S)" "FIXME(f)" "|" "CANCELED(C)" "DROPPED(x)")
(sequence "NOTE")))
(setq org-todo-keyword-faces
'(("TODO" :foreground "chartreuse" :weight bold)
("FIXME" :foreground "violet red" :weight bold)
("NEXT" :foreground "orange" :weight bold)
("STARTED" :foreground "black" :background "green yellow" :weight bold)
("DONE" :foreground "slate gray" :weight bold)
("WAITING" :foreground "indian red" :weight bold)
("SOMEDAY" :foreground "medium orchid" :weight bold)
("NOTE" :foreground "dark cyan" :weight bold)
("DROPPED" :foreground "dark slate blue" :weight bold)
("CANCELED" :foreground "steel blue" :weight bold)))
; State triggers
; We want CANCELED and WAITING states to show up in subtasks as well. Do this
; by assigning tags to the tasks on setting the state.
(setq org-todo-state-tags-triggers
(done ("WORKINGON") ("WAITING"))
; Quick tags, add with C-c C-q
; WORKINGON is a tag for projects that are currently at top priority and from
; which the next task should be picked from.
(setq org-tag-alist '(("WORKINGON" . ?a)
("WAITING" . ?w)
("REFILE" . ?r)))
; Custom agenda
(setq org-agenda-custom-commands
'(("p" "Active projects" tags "WORKINGON/PROJECT" ((org-use-tag-inheritance nil)))
("P" "All projects" tags "/PROJECT" ((org-use-tag-inheritance nil)))
("w" "Tasks waiting on something" tags "WAITING"
((org-use-tag-inheritance nil)))
("t" "Actively developed tasks" tags
((org-use-tag-inheritance nil)))
("T" "Actively developed task subtrees" tags
("n" "Started and upcoming tasks" tags "/NEXT|STARTED"
((org-agenda-todo-ignore-with-date nil)))
; Define stuck projects as PROJECT-tag trees ones without any TODOs or started
; tasks.
(setq org-stuck-projects '("/PROJECT-DONE" ("STARTED" "TODO" "NEXT" "FIXME") nil ""))
; Support for task effort estimates
; Do effort estimates by going into column mode with C-c C-x C-c and choosing
; a value in the Effort field.
; Set up the effort value for column-mode view.
(setq org-columns-default-format "%80ITEM(Task) %10Effort(Effort){:} %10CLOCKSUM")
; Set up predefined effort values.
(setq org-global-properties '(("Effort_ALL" . "0:10 0:30 1:00 2:00 3:00 4:00 6:00 8:00")))
; Appointments from org agenda
; Rebuild reminders whenever agenda is modified.
; XXX: Clears all appts set via other means.
(defun regenerate-org-appt ()
(setq appt-time-msg-list nil)
(add-hook 'org-finalize-agenda-hook 'regenerate-org-appt)
(appt-activate t)
; Bring up the next day's appointments after midnight.
(run-at-time "24:01" nil 'regenerate-org-appt)
; Org and remember mode
(require 'remember)
; Key binding for doing org-remember
; XXX: Clobbers regexp-search backwards.
(global-set-key (kbd "C-M-r") (lambda () (interactive) (org-remember nil "n")))
; Collection bins for notes and tasks entered via remember.
; You can add the line
; in the collection files to mark the entries as ones that should be refiled
; to more proper locations in due course.
; Put remember files in home or work subdir depending on which exists.
(let* ((prefix
(cond ((file-exists-p "~/work/orghome") "~/work/orghome/")
((file-exists-p "~/work/orgwork") "~/work/orgwork/")
(t "~/org/")))
(notes-file (concat prefix "")))
(setq org-remember-templates `((?w "* WWW: %:description\n %T\n [[%:link]]\n\n%i" ,notes-file "Notes" nil)
("note" ?n "* %?\n %T" ,notes-file "Notes" nil))))
; Refiling settings
(setq org-completion-use-ido t)
(setq org-refile-targets '((org-agenda-files :maxlevel . 5) (nil :maxlevel . 5)))
(setq org-refile-use-outline-path (quote file))
; Latex settings
; Get \Perp symbol work for stochastic text.
(setq org-export-latex-append-header "\\newcommand{\\Perp}{\\perp \\! \\! \\! \\perp}")
(defun org-mode-reftex-setup ()
(load-library "reftex")
(and (buffer-file-name) (file-exists-p (buffer-file-name))
;enable auto-revert-mode to update reftex when bibtex file changes on disk
(global-auto-revert-mode t)
;add a custom reftex cite format to insert links
'((?b . "[[bib:%l][%l-bib]]")
(?n . "[[notes:%l][%l-notes]]")
(?p . "[[papers:%l][%l-paper]]")
(?t . "%t")
(?h . "** %t\n:PROPERTIES:\n:Custom_ID: %l\n:END:\n[[papers:%l][%l-paper]]")))))
(define-key org-mode-map (kbd "C-c )") 'reftex-citation)
(define-key org-mode-map (kbd "C-c (") 'org-mode-reftex-search))
(defun org-mode-reftex-search ()
;;jump to the notes for the paper pointed to at from reftex search
(org-open-link-from-string (format "[[notes::%s]]" (reftex-citation t))))
(add-hook 'org-mode-hook 'org-mode-reftex-setup)
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