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README.md
Stan for spatio-temporal.pdf PDF of the presentation May 6, 2017
gp_2dim_array_dgp.R
gp_2dim_ncp.stan
gp_2dim_ncp_incomplete_obs.stan
gp_2dim_ncp_pois.stan
gp_3dim_array_dgp.R Added separate scales for spatial dimension (x1 and x2) and time (x3) May 6, 2017
gp_3dim_array_dgp_NB.R Updates to discrete Kronecker GP models May 6, 2017
gp_3dim_array_dgp_pois.R Updates to discrete Kronecker GP models May 6, 2017
gp_3dim_ncp.stan
gp_3dim_ncp_NB.stan Updates to discrete Kronecker GP models May 6, 2017
gp_3dim_ncp_pois.stan
multi_output_dgp.R
multi_output_gp_ncp.stan

README.md

Contains code for multiple output/Kronecker GPs in Stan.

The following models are included in the repo:

  • 1-dimensional GP with 3-dimensonal multivariate normal observations
  • 2-dimensional Kronecker GP with Gaussian observations
  • 2-dimensional Kronecker GP with Poisson observations
  • 3-dimensional Kronecker GP with Gaussian observations
  • 3-dimensional Kronecker GP with Poisson observations

Each .stan file has a matching R file that will generate fake data corresponding the generative model in the Stan program.

MIT License

Copyright (c) [2017] [Robert Trangucci]

Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

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