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Hello 👋

My name is Rutger, and I'm currently a PhD candidate at AMOLF in biology. On GitHub, you can find the OrganoidTracker, the cell tracker that I wrote together with a few others. It uses machine learning to detect cells, so it's completely buzzword-compatible and it also performs well. It's used to follow cells in time lapses of mini-intestines that we culture on a dish. Watch the movie!

Personal projects 🔭

There are also a lot of projects related to Minecraft here, all written for the Minecraft server Wereldbouw where I'm an admin. Together, it's a lot of code! I've written

There are also some no-longer-maintained projects on here, such as a Google Maps-like live map for Minecraft or an entire website content management system written in PHP, with support for widgets, translations, user roles and categorized content.

Contact 📫

All my repositories have an issues section, feel free to use it for questions, bug reports and other things. For more general things, you can of course also email me. Hoping to hear from you soon!


My stats


  1. Cell tracker designed for tracking intestinal organoids

    Python 7 1

  2. Protect chests, doors and other blocks in Minecraft from being opened using protection signs

    Java 29 28

  3. Spigot plugin that adds functionality for both players and admins to the Ender Chest.

    Java 13 8

  4. Minecraft Spigot plugin that enables other plugins to customize world generation

    Java 61 8

  5. Dough Public

    Dough World Generator - Minecraft Spigot plugin to change the basic shape of your world

    Java 4

  6. Cells Public

    Code for the AMOLF open dag 2019. In this game, you need to keep the tissue alive for as long as possible.


937 contributions in the last year

Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity

September 2021

6 contributions in private repositories Sep 2 – Sep 15

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