High-performance I/O tools to run distributed R jobs seamlessly on Hadoop and handle chunk-wise data processing
Switch branches/tags
Clone or download
Failed to load latest commit information.
R add fdrbind() Apr 13, 2017
src add support for logical vectors in fdrbind Feb 5, 2018
tests fixed issue #24 to support quotes in character fields Jun 22, 2015
.gitignore clarifying role of utf-8 in mstrsplit and dstrsplit Jan 12, 2015
NAMESPACE add fdrbind() Apr 13, 2017
README.md adding tests and fixes to make them run on edge cases May 22, 2015


High-performance I/O tools for R

Anyone dealing with large data knows that stock tools in R are bad at loading (non-binary) data to R. This package started as an attempt to provide high-performance parsing tools that minimize copying and avoid the use of strings when possible (see mstrsplit, for example).

To allow processing of arbitrarily large files we have added way to process chunk-wise input, making it possible to compute on streaming input as well as very large files (see chunk.reader and chunk.apply).

The next natural progress was to wrap support for Hadoop streaming. The major goal was to make it possible to compute using Hadoop Map Reduce by writing code that is very natural - very much like using lapply on data chunks without the need to know anything about Hadoop. See the WiKi page for the idea and hmr function for the documentation.