A tool for manual pointwise deformable registration using bigdataviewer.
JA Bogovic, P Hanslovsky, A Wong, S Saalfeld, "Robust registration of calcium images by learned contrast synthesis", In Biomedical Imaging (ISBI), 2016 IEEE 13th International Symposium on, 1123-1126, DOI: 10.1109/ISBI.2016.7493463.
See the main bigwarp page for details.
Also available on conda as standalone version outside of Fiji:
# Installation conda install -c hanslovsky bigwarp # Run bigwarp <moving-image> <target-image> <optional-landmarks>