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@konstin konstin released this 06 Sep 02:49
· 186 commits to develop since this release
  • Added the esm1v embedder from Meier et al. 2021, which is part of facebook's esm. Note that this is an ensemble model, so you need to pass ensemble_id with a value from 1 to 5 to select which weights to use.
  • Added the bindEmbed21DL extract protocol which is an ensemble of 5 convolutional neural network that predicts of 3 different types of binding residues (metal, nucleic acids, small molecules).
  • Fix model download
  • Update jaxlib to fix pip installation