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Add Dockerfile #73

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cthoyt opened this issue Mar 13, 2019 · 4 comments
Closed

Add Dockerfile #73

cthoyt opened this issue Mar 13, 2019 · 4 comments
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enhancement Adds a new feature/information update Major changes
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@cthoyt
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cthoyt commented Mar 13, 2019

A Dockerfile would be really useful to provide so the entire database could be built from scratch (all dependencies, resources, etc.)

@Nic-Nic Nic-Nic added the enhancement Adds a new feature/information label Mar 14, 2019
@Nic-Nic Nic-Nic added the update Major changes label Aug 21, 2019
@Nic-Nic Nic-Nic added this to the PyPath v1.0 milestone Aug 21, 2019
@ntung
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ntung commented Feb 20, 2020

In my experience, it is really challenging to install pypath. We have some interns who are neither computer science students nor software engineers and are doing to figure out pypath. They always need our help. A docker image would be worth for any developers.

@ivanovaos
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Hi @ntung, we are currently working on it. The docker image will be provided soon. In the meantime, can you maybe provide your usual setup (OS, python version, etc.)?

@deeenes
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deeenes commented Feb 20, 2020

In my experience, it is really challenging to install pypath.

Since we recently removed igraph and hence cairo from the mandatory dependencies it's not so challenging any more. I think on any operating system one can simply do pip install git+git://github.com/saezlab/pypath.git

@Nic-Nic
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Nic-Nic commented Feb 15, 2024

Closing as solved

@Nic-Nic Nic-Nic closed this as completed Feb 15, 2024
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5 participants