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Deep learning model for HIstoPatholOgy (Deep-Hipo)

Deep-Hipo is designed to accurately analyze histopathological images by learning multi-scale morphological patterns from various magnification levels of patches in a WSI simultaneously

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Required packages:

  • PyHistopathology
  • Open CV
  • Sklearn
  • Keras
  • Tensorflow

CODE FOLLOW:

Codes for Training are in Deep-Hipo folder

  • Deep-HipoTrain.py is the interface for train our model. It has data generators which automatically loads multiple inputs simantionously.
  • Deep-Hipo_Model.py Constructs Deep-Hipo architecture.
  • Dilationlayer.py Dilation Layers (intial layers) for Deep-Hipo architecture
  • InceptionA.py Module A of our architecture.
  • InceptionB.py Module B of our architecture.
  • InceptionC.py Module C of our architecture.
  • InceptionD.py Module D of our architecture.
  • InceptionE.py Module E of our architecture.

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Deep-Hipo: Deep learning Tool for Histopathological Image Analysis

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  • Python 100.0%