@salilab

Sali Lab

Laboratory of Andrej Sali at the University of California San Francisco

Pinned repositories

  1. imp

    The Integrative Modeling Platform

    C++ 28 11

  2. pmi

    Python Modeling Interface

    Python 6 2

  3. rmf

    The library to support reading and writing of RMF files.

    C++ 2

  • Tutorial that demonstrates the modeling of RNA Polymerase II using Electron Microscopy density and chemical crosslinks

    Python 1 Updated May 24, 2017
  • Python Modeling Interface

    Python 6 2 Updated May 24, 2017
  • The Integrative Modeling Platform

    C++ 28 11 Updated May 23, 2017
  • Web service for simulations on a user-provided energy landscape

    Perl 1 Updated May 23, 2017
  • Recipes for the conda package manager

    C Updated May 19, 2017
  • IMP module for simulating transport through the NPC.

    Python Updated May 18, 2017
  • The library to support reading and writing of RMF files.

    C++ 2 Updated May 9, 2017
  • Library for prediction of cryptic binding sites

    Python 3 Updated May 4, 2017
  • Simple framework for web services in the Sali lab

    Python 1 3 Updated Apr 24, 2017
  • Generate frequency tables used by Modeller and IMP.

    C Updated Apr 20, 2017
  • ๐Ÿป Sali Lab formulae for homebrew

    Ruby Updated Apr 20, 2017
  • Website for the IMP project

    PHP 1 Updated Apr 19, 2017
  • Protocol to model with allostery

    Python 1 Updated Apr 19, 2017
  • ๐Ÿ›  Useful scripts used by several projects.

    Python Updated Apr 14, 2017
  • Jupyter Notebook 1 Updated Apr 7, 2017
  • Web service for macromolecular docking with SAXS profiles

    Perl Updated Mar 30, 2017
  • Python Updated Mar 27, 2017
  • Web server for prediction of cryptic binding sites

    Perl Updated Mar 21, 2017
  • Web server for multi-state modeling with SAXS profiles

    Perl 1 Updated Mar 14, 2017
  • Experimental DOMINO variant using traditional inference

    C++ 1 Updated Mar 7, 2017
  • Shared cmake modules for Sali lab projects

    CMake Updated Mar 7, 2017
  • Web server for automated modeling of loops in protein structures

    Perl Updated Mar 5, 2017
  • Web server for merging SAXS profiles

    Perl 1 Updated Feb 24, 2017
  • Mass spectrometry interaction STatistics

    Python Updated Feb 14, 2017
  • Workshop on using new data in integrative modeling

    Python Updated Dec 16, 2016
  • Workshop on setting up and analyzing the SEA complex

    Python Updated Dec 16, 2016
  • Support code for HDX data reduction

    Python Updated Nov 30, 2016
  • Mass spectrometry interaction STatistics (web interface)

    Perl Updated Nov 16, 2016
  • Web service for evaluating protein structure models

    Perl Updated Nov 2, 2016
  • Web service for scoring protein-ligand complexes

    Perl Updated Sep 27, 2016