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inconsistencies b/w docs and code #32

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sg-s opened this issue Nov 21, 2022 · 1 comment
Closed

inconsistencies b/w docs and code #32

sg-s opened this issue Nov 21, 2022 · 1 comment

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@sg-s
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sg-s commented Nov 21, 2022

in this file, we find the following:

trace_output_option: EXTRACT has two options for trace output: 'raw' and 'nonneg'. 'nonneg' outputs only the signal portion of the trace, consistent with the fundamental assumptions of EXTRACT. 'raw' outputs signal + noise. Default: 'nonneg'.

However, when we look at the default config, we find:

>> config = get_defaults([]);
>> config.trace_output_option
ans =
    'baseline_adjusted'

which is not referred to in the docs

@fatihdinc
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Thanks! I am in the process of re-writing the full documentation, and will add a user manual soon.

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