Scott Cain scottcain

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@bioperl @GMOD @gmodevohack
scottcain commented on pull request GMOD/Chado#6
@scottcain

Also, it seems like most people will do one pull request per branch and then delete the branch after it gets merged. I don't suppose it matters, bu…

scottcain commented on pull request GMOD/Chado#7
@scottcain

Looks good!

scottcain pushed to 1.31 at GMOD/Chado
@scottcain
scottcain merged pull request GMOD/Chado#7
@scottcain
Created db module and moved db/dbxref tables to it
1 commit with 1 addition and 48 deletions
scottcain commented on pull request GMOD/Chado#6
@scottcain

I hate when I do that :-)

scottcain opened pull request GMOD/Chado#5
@scottcain
removing all of the strain tables in prep for adding infraspecific fi…
1 commit with 0 additions and 324 deletions
@scottcain
  • @scottcain 3727dbf
    removing all of the strain tables in prep for adding infraspecific fi…
scottcain created branch strain_removal at GMOD/Chado
scottcain deleted branch strain_removal at GMOD/Chado
scottcain created branch strain_removal at GMOD/Chado
scottcain deleted branch bigserial_fix at GMOD/Chado
scottcain closed issue GMOD/Chado#1
@scottcain
PRIMARY KEYs should be TYPE bigint [CASCADE]
scottcain commented on issue GMOD/Chado#1
@scottcain

Done--it took a while even with some perl onliners to help.

scottcain pushed to 1.31 at GMOD/Chado
@scottcain
  • @scottcain cf9adcb
    building the stuff for automatically updating existing schemas
scottcain commented on pull request GMOD/Chado#4
@scottcain

OK, I think this is ready to merge now.

@scottcain
  • @scottcain 7771c5b
    accidentally made a few fields called "row_id" into bigint (bad field…
@scottcain
  • @scottcain 3db7cf6
    all of this needs to go into the "schemas" directory (oy, I forgot ab…
@scottcain
  • @scottcain 5dd600c
    updated organism, project and puby
@scottcain
  • @scottcain 02b15f2
    strain tables won't go into 1.3
@scottcain
  • @scottcain f754420
    yay! www isn't in schema.nofuncs, so I don't have to deal with it (wh…
@scottcain
  • @scottcain c8a0a0a
    a foreign key accidentally got set to being serial instead of int
@scottcain
  • @scottcain 75e55ff
    This isn't ready to merge yet, but I don't want to lose changes either
@scottcain
  • @scottcain c66c96f
    Oops a few more ranks that accidentally changed to bigint
@scottcain
  • @scottcain 955d6cb
    oops accidentally made a rank a bigint
scottcain opened pull request GMOD/Chado#4
@scottcain
updating all primary keys and related foreign keys to bigint. Pretty…
1 commit with 740 additions and 740 deletions
@scottcain
  • @scottcain e611def
    updating all primary keys and related foreign keys to bigint. Pretty …
scottcain created branch bigserial_fix at GMOD/Chado
scottcain opened issue GMOD/Chado#3
@scottcain
Add keys to "temp" tables.
scottcain commented on issue WormBase/website#3878
@scottcain

I have no idea--when I try to do roughly the same thing, I get a new window with this URL: http://www.wormbase.org/tools/genome/gbrowse/p_redivivus…

@scottcain
The overview track used to show landm...