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Scott Gigante scottgigante

PhD Student at Yale University

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PhD Student at Yale University

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KrishnaswamyLab/PHATE

PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.

Python 202 25
KrishnaswamyLab/MAGIC

MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

Jupyter Notebook 137 54
KrishnaswamyLab/graphtools

Tools for building and manipulating graphs in Python

Python 12 4
KrishnaswamyLab/scprep

A collection of scripts and tools for loading, processing, and handling single cell data.

Python 20 8
m-phate

Multislice PHATE for tensor embeddings

Python 27 3
picopore

A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information

Python 30 4