diff --git a/module_user_guide.ipynb b/module_user_guide.ipynb index f31b51a2..62c9558e 100644 --- a/module_user_guide.ipynb +++ b/module_user_guide.ipynb @@ -411,7 +411,7 @@ " # the pytorch NB distribution uses a different parameterization\n", " # so we must apply a quick transformation (included in scvi-tools, but here we use the pytorch code)\n", " nb_logits = (px_rate + 1e-4).log() - (theta + 1e-4).log()\n", - " log_lik = NegativeBinomial(total_counts=theta, total=nb_logits).log_prob(x).sum(dim=-1) \n", + " log_lik = NegativeBinomial(total_count=theta, logits=nb_logits).log_prob(x).sum(dim=-1) \n", "\n", " # term 2\n", " prior_dist = Normal(torch.zeros_like(qz_m), torch.ones_like(qz_v))\n",