From e381350fc40cdc242373a4ad2b333a8d4ada6f33 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 1 Jul 2024 18:07:47 +0000
Subject: [PATCH 1/2] [pre-commit.ci] pre-commit autoupdate
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Content-Type: text/plain; charset=UTF-8
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updates:
- [github.com/asottile/blacken-docs: 1.16.0 → 1.18.0](https://github.com/asottile/blacken-docs/compare/1.16.0...1.18.0)
- [github.com/pre-commit/mirrors-mypy: v1.10.0 → v1.10.1](https://github.com/pre-commit/mirrors-mypy/compare/v1.10.0...v1.10.1)
- [github.com/PyCQA/flake8: 7.0.0 → 7.1.0](https://github.com/PyCQA/flake8/compare/7.0.0...7.1.0)
---
 .pre-commit-config.yaml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index ff350b2a..5b9195b4 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -15,7 +15,7 @@ repos:
       hooks:
           - id: prettier
     - repo: https://github.com/asottile/blacken-docs
-      rev: 1.16.0
+      rev: 1.18.0
       hooks:
           - id: blacken-docs
     - repo: https://github.com/PyCQA/isort
@@ -23,7 +23,7 @@ repos:
       hooks:
           - id: isort
     - repo: https://github.com/pre-commit/mirrors-mypy
-      rev: v1.10.0
+      rev: v1.10.1
       hooks:
           - id: mypy
             additional_dependencies: [numpy, types-PyYAML]
@@ -59,7 +59,7 @@ repos:
                 - --remove-unused-variable
                 - --ignore-init-module-imports
     - repo: https://github.com/PyCQA/flake8
-      rev: 7.0.0
+      rev: 7.1.0
       hooks:
           - id: flake8
             additional_dependencies:

From 6c2462043afe2417c6ee8f498d9d3cd5041ed0c7 Mon Sep 17 00:00:00 2001
From: Luca Marconato <m.lucalmer@gmail.com>
Date: Wed, 3 Jul 2024 12:41:55 +0200
Subject: [PATCH 2/2] fix precommit np.float_

---
 src/spatialdata_io/readers/mcmicro.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/spatialdata_io/readers/mcmicro.py b/src/spatialdata_io/readers/mcmicro.py
index a84121fb..22d521ad 100644
--- a/src/spatialdata_io/readers/mcmicro.py
+++ b/src/spatialdata_io/readers/mcmicro.py
@@ -258,7 +258,7 @@ def _create_anndata(
         obs=table.drop(columns=var + coords),
         var=markers,
         obsm={"spatial": table[coords].to_numpy()},
-        dtype=np.float_,
+        dtype=float,
     )
     adata.obs["region"] = pd.Categorical([region_value] * len(adata))
     return adata, region_value