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The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
SeqAn's official repository.
Infrastructure for seqan3 including nightly builds, continues integration, continues deployment, coverage tests, static code analysis and containerisation.
flexible barcode and adapter removal
Scripts for building app and library packages and publishing of http://packages.seqan.de
Species Level Identification of Microbes from Metagenomes
LAMBDA – the Local Aligner for Massive Biological DatA
Clone of the latest release of the lemon library (only the headers)
Identification of structural variations
Methods for the detection and assembly of novel sequence in high-throughput sequencing data
All the scripts for generating API docs on ReadTheDocs
Unit tests for the SeqAn3 library.
SeqAn3 manual source, manual build utils, manual code snippets and tests for the manual code snippets.
SeqAn Benchmark Suite [source code]
SeqAn Benchmark Suite [data files]
SeqAn Benchmark Suite [phoronix test suite files]
Read mapper benchmark
KNIME example workflows for NGS data analysis with SeqAn apps.
Fork of seqan/flexbar by @catkira
KNIME Node Template