diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index aa44d560..6942430e 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -37,9 +37,7 @@ repos:
         name: black
         types:
           - python
-      - args:
-          - '--filter-files'
-        entry: pipenv run python -m isort
+      - entry: pipenv run python -m isort
         id: isort
         language: system
         name: isort
@@ -62,7 +60,7 @@ repos:
         name: ruff
         types:
           - python
-      - entry: pipenv run toml-sort -a -i
+      - entry: pipenv run toml-sort --check
         id: toml-sort
         language: system
         name: toml-sort
diff --git a/Makefile b/Makefile
index b70c8182..cf84a777 100644
--- a/Makefile
+++ b/Makefile
@@ -57,7 +57,7 @@ ruff:
 	${PIPRUN} python -m ruff docs tests src
 
 toml-sort:
-	${PIPRUN} toml-sort -a -i pyproject.toml
+	${PIPRUN} toml-sort pyproject.toml
 
 tests:
 	${PIPRUN} python -m pytest .
diff --git a/Makefile.jinja b/Makefile.jinja
index 6295a002..a0b63a72 100644
--- a/Makefile.jinja
+++ b/Makefile.jinja
@@ -59,7 +59,7 @@ ruff:
 	${PIPRUN} python -m ruff docs tests src
 
 toml-sort:
-	${PIPRUN} toml-sort -a -i pyproject.toml
+	${PIPRUN} toml-sort pyproject.toml
 
 tests:
 	${PIPRUN} python -m pytest .
diff --git a/pyproject.toml b/pyproject.toml
index 350def3a..57d66dd4 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -2,12 +2,12 @@
 build-backend = "setuptools.build_meta"
 requires = [
   "setuptools",
-  "setuptools-scm"
+  "setuptools-scm",
 ]
 
 [project]
 authors = [
-  {email = "i@huxuan.org", name = "huxuan"}
+  {email = "i@huxuan.org", name = "huxuan"},
 ]
 classifiers = [
   "Development Status :: 4 - Beta",
@@ -16,19 +16,19 @@ classifiers = [
   "Programming Language :: Python :: 3.10",
   "Programming Language :: Python :: 3.11",
   "Programming Language :: Python :: 3.8",
-  "Programming Language :: Python :: 3.9"
+  "Programming Language :: Python :: 3.9",
 ]
 description = "A serious Python project template for out-of-box and production usage."
 dynamic = [
   "dependencies",
   "optional-dependencies",
-  "version"
+  "version",
 ]
 keywords = [
   "out-of-box",
   "production",
   "project template",
-  "template"
+  "template",
 ]
 name = "serious-scaffold"
 readme = "README.md"
@@ -46,18 +46,22 @@ fail_under = 100
 
 [tool.coverage.run]
 omit = [
-  "src/{{ module_name }}/*"
+  "src/{{ module_name }}/*",
 ]
 
+[tool.isort]
+filter_files = true
+profile = "black"
+
 [tool.mypy]
 check_untyped_defs = true
 disallow_any_unimported = true
 disallow_untyped_defs = true
 enable_error_code = [
-  "ignore-without-code"
+  "ignore-without-code",
 ]
 exclude = [
-  "src/{{ module_name }}"
+  "src/{{ module_name }}",
 ]
 no_implicit_optional = true
 show_error_codes = true
@@ -84,7 +88,7 @@ extend-ignore = [
   "D407",
   "D408",
   "D409",
-  "D413"
+  "D413",
 ]
 fix = true
 per-file-ignores = {"tests/*" = ["S101"]}
@@ -102,3 +106,8 @@ package = {file = ["requirements/package.txt"]}
 tests = {file = ["requirements/tests.txt"]}
 
 [tool.setuptools_scm]
+
+[tool.tomlsort]
+all = true
+in_place = true
+trailing_comma_inline_array = true
diff --git a/pyproject.toml.jinja b/pyproject.toml.jinja
index eb183866..fc34aee4 100644
--- a/pyproject.toml.jinja
+++ b/pyproject.toml.jinja
@@ -2,12 +2,12 @@
 build-backend = "setuptools.build_meta"
 requires = [
   "setuptools",
-  "setuptools-scm"
+  "setuptools-scm",
 ]
 
 [project]
 authors = [
-  {email = "{{ author_email }}", name = "{{ author_name }}"}
+  {email = "{{ author_email }}", name = "{{ author_name }}"},
 ]
 classifiers = [
   "Development Status :: 4 - Beta",
@@ -16,19 +16,19 @@ classifiers = [
   "Programming Language :: Python :: 3.10",
   "Programming Language :: Python :: 3.11",
   "Programming Language :: Python :: 3.8",
-  "Programming Language :: Python :: 3.9"
+  "Programming Language :: Python :: 3.9",
 ]
 description = "{{ project_description }}"
 dynamic = [
   "dependencies",
   "optional-dependencies",
-  "version"
+  "version",
 ]
 keywords = [
   "out-of-box",
   "production",
   "project template",
-  "template"
+  "template",
 ]
 name = "{{ package_name }}"
 readme = "README.md"
@@ -47,20 +47,24 @@ fail_under = 100
 [tool.coverage.run]
 omit = [
 {%- if project_name == "Serious Scaffold Python" %}
-  "src/{{ '{{ module_name }}' }}/*"
+  "src/{{ '{{ module_name }}' }}/*",
 {%- endif %}
 ]
 
+[tool.isort]
+filter_files = true
+profile = "black"
+
 [tool.mypy]
 check_untyped_defs = true
 disallow_any_unimported = true
 disallow_untyped_defs = true
 enable_error_code = [
-  "ignore-without-code"
+  "ignore-without-code",
 ]
 exclude = [
 {%- if project_name == "Serious Scaffold Python" %}
-  "src/{{ '{{ module_name }}' }}"
+  "src/{{ '{{ module_name }}' }}",
 {%- endif %}
 ]
 no_implicit_optional = true
@@ -88,7 +92,7 @@ extend-ignore = [
   "D407",
   "D408",
   "D409",
-  "D413"
+  "D413",
 ]
 fix = true
 per-file-ignores = {"tests/*" = ["S101"]}
@@ -106,3 +110,8 @@ package = {file = ["requirements/package.txt"]}
 tests = {file = ["requirements/tests.txt"]}
 
 [tool.setuptools_scm]
+
+[tool.tomlsort]
+all = true
+in_place = true
+trailing_comma_inline_array = true