{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":780558174,"defaultBranch":"main","name":"pangenome","ownerLogin":"serratus-bio","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2024-04-01T18:16:24.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/62980588?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1712338967.0","currentOid":""},"activityList":{"items":[{"before":"02636f36d78f97d777c176579b3f0596982a05f8","after":"0a9c6fb0ae199be91bc1269617a1b279b7235e17","ref":"refs/heads/main","pushedAt":"2024-06-17T15:21:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LicoriceLin","name":null,"path":"/LicoriceLin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/93641868?s=80&v=4"},"commit":{"message":"debug hhblits","shortMessageHtmlLink":"debug hhblits"}},{"before":"2b0a9657cd03c2ca92cbb706512509de14a614eb","after":"b5aa270f376ef993ce7f9c64851d93b759e0c819","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-06-04T15:18:59.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Updates","shortMessageHtmlLink":"Updates"}},{"before":"eb83e1d49023116b691fb3723898ae7312a1e628","after":"2b0a9657cd03c2ca92cbb706512509de14a614eb","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-30T20:59:22.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Updates\n\n.","shortMessageHtmlLink":"Updates"}},{"before":"7b1c8f1d6b32c9841badc80385a2f4a1be462880","after":"eb83e1d49023116b691fb3723898ae7312a1e628","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-28T16:39:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Updates","shortMessageHtmlLink":"Updates"}},{"before":"65383c8c4b3a7e3b602727a666b1cb80cba47660","after":"7b1c8f1d6b32c9841badc80385a2f4a1be462880","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-22T21:23:01.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Updates to pipeline","shortMessageHtmlLink":"Updates to pipeline"}},{"before":"3aaa79e5b40b728b9a783db5f9d5833c91d52acd","after":"65383c8c4b3a7e3b602727a666b1cb80cba47660","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-21T15:36:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Updates to pipeline","shortMessageHtmlLink":"Updates to pipeline"}},{"before":"1a7ae19ec08b6eb7bf7165aeeb12b77c0f6814d0","after":"3aaa79e5b40b728b9a783db5f9d5833c91d52acd","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-10T20:05:38.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier (graph schema v2)","shortMessageHtmlLink":"Add notebooks for taxon classifier (graph schema v2)"}},{"before":"9367e0439aa273527fd88e6173a620c6e7dcc141","after":"1a7ae19ec08b6eb7bf7165aeeb12b77c0f6814d0","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-08T15:49:14.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier (graph schema v2)","shortMessageHtmlLink":"Add notebooks for taxon classifier (graph schema v2)"}},{"before":"ca383cbe74178c06c8d576d321d0c7ad80db47e5","after":"9367e0439aa273527fd88e6173a620c6e7dcc141","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-07T14:35:58.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier (graph schema v2)","shortMessageHtmlLink":"Add notebooks for taxon classifier (graph schema v2)"}},{"before":"0574abb3fabb60b574b7e23cd4de83fff42eb794","after":"ca383cbe74178c06c8d576d321d0c7ad80db47e5","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-06T23:40:35.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier (graph schema v2)","shortMessageHtmlLink":"Add notebooks for taxon classifier (graph schema v2)"}},{"before":"2efc65bcc71a11c9b242f7930bcae8dcc388ebf0","after":"0574abb3fabb60b574b7e23cd4de83fff42eb794","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-05-02T20:17:42.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier (graph schema v2)","shortMessageHtmlLink":"Add notebooks for taxon classifier (graph schema v2)"}},{"before":"b5598aa451dbe101270000cd0ebbb55b037df65d","after":"2efc65bcc71a11c9b242f7930bcae8dcc388ebf0","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-25T02:34:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier (graph schema v2)","shortMessageHtmlLink":"Add notebooks for taxon classifier (graph schema v2)"}},{"before":"b1c75fe120650c06e7fd7c852909227a6ebb6b72","after":"b5598aa451dbe101270000cd0ebbb55b037df65d","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-24T15:51:34.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier (graph schema v1)","shortMessageHtmlLink":"Add notebooks for taxon classifier (graph schema v1)"}},{"before":"10dab50e983467a13bc4455288c2b62cc943fc55","after":"02636f36d78f97d777c176579b3f0596982a05f8","ref":"refs/heads/main","pushedAt":"2024-04-23T20:20:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LicoriceLin","name":null,"path":"/LicoriceLin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/93641868?s=80&v=4"},"commit":{"message":"hhr score explanations","shortMessageHtmlLink":"hhr score explanations"}},{"before":"fed6e72d7b748a0702428624770e6c1e21dd1bba","after":"b1c75fe120650c06e7fd7c852909227a6ebb6b72","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-22T19:42:24.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier: exploration and train-eval","shortMessageHtmlLink":"Add notebooks for taxon classifier: exploration and train-eval"}},{"before":"dcac70126cfdac4ccf5fed0e525af4e28d7e6e6b","after":"10dab50e983467a13bc4455288c2b62cc943fc55","ref":"refs/heads/main","pushedAt":"2024-04-22T18:40:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LicoriceLin","name":null,"path":"/LicoriceLin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/93641868?s=80&v=4"},"commit":{"message":"dedpulicate hhblits legacy","shortMessageHtmlLink":"dedpulicate hhblits legacy"}},{"before":"ef29fd23144d2be08265bd47b7b26c01a8d627bc","after":"dcac70126cfdac4ccf5fed0e525af4e28d7e6e6b","ref":"refs/heads/main","pushedAt":"2024-04-19T21:04:57.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"LicoriceLin","name":null,"path":"/LicoriceLin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/93641868?s=80&v=4"},"commit":{"message":"hhblits graph construction","shortMessageHtmlLink":"hhblits graph construction"}},{"before":"f36d93d82cd27d7163388adfa77e6147fb1c16ee","after":"fed6e72d7b748a0702428624770e6c1e21dd1bba","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-15T01:52:00.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier: exploration and train-eval","shortMessageHtmlLink":"Add notebooks for taxon classifier: exploration and train-eval"}},{"before":"da7c03a0ee586db9774c08369e7ce1657d504a53","after":"f36d93d82cd27d7163388adfa77e6147fb1c16ee","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-12T17:45:51.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier: exploration and train-eval","shortMessageHtmlLink":"Add notebooks for taxon classifier: exploration and train-eval"}},{"before":"cde670970c7fe47b8357b64633a7c0e5ca9e45ef","after":"da7c03a0ee586db9774c08369e7ce1657d504a53","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-10T23:00:06.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier: exploration and train-eval","shortMessageHtmlLink":"Add notebooks for taxon classifier: exploration and train-eval"}},{"before":"9204b5485b744e071462b6a3679bb1f79dbc59cd","after":"cde670970c7fe47b8357b64633a7c0e5ca9e45ef","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-09T21:21:51.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier: exploration and train-eval","shortMessageHtmlLink":"Add notebooks for taxon classifier: exploration and train-eval"}},{"before":"1306bd8857f734b57c18761a71d65f5d229163c5","after":"9204b5485b744e071462b6a3679bb1f79dbc59cd","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-08T21:31:38.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"Add notebooks for taxon classifier: exploration and train-eval","shortMessageHtmlLink":"Add notebooks for taxon classifier: exploration and train-eval"}},{"before":"46d63b6bb2cec3e32968c6e541c2ebae116c7f2c","after":"1306bd8857f734b57c18761a71d65f5d229163c5","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-08T18:26:25.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"WIP","shortMessageHtmlLink":"WIP"}},{"before":"e9b9f3c6e259d69f915f103dc74be455bc08f86f","after":"46d63b6bb2cec3e32968c6e541c2ebae116c7f2c","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-05T19:49:01.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"WIP","shortMessageHtmlLink":"WIP"}},{"before":null,"after":"ef29fd23144d2be08265bd47b7b26c01a8d627bc","ref":"refs/heads/evan","pushedAt":"2024-04-05T17:42:47.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"LicoriceLin","name":null,"path":"/LicoriceLin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/93641868?s=80&v=4"},"commit":{"message":"add evalue/hitscore","shortMessageHtmlLink":"add evalue/hitscore"}},{"before":"3f2240b8506ff8a178d9b6f68643045a810564df","after":"ef29fd23144d2be08265bd47b7b26c01a8d627bc","ref":"refs/heads/main","pushedAt":"2024-04-05T17:40:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LicoriceLin","name":null,"path":"/LicoriceLin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/93641868?s=80&v=4"},"commit":{"message":"add evalue/hitscore","shortMessageHtmlLink":"add evalue/hitscore"}},{"before":"352dba76718437e206d6561b83219d471eeb8811","after":"e9b9f3c6e259d69f915f103dc74be455bc08f86f","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-05T02:27:15.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"WIP","shortMessageHtmlLink":"WIP"}},{"before":"e82080fab797b40226eadd4d8de967d3c2a2e5f0","after":"3f2240b8506ff8a178d9b6f68643045a810564df","ref":"refs/heads/main","pushedAt":"2024-04-04T19:59:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LicoriceLin","name":null,"path":"/LicoriceLin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/93641868?s=80&v=4"},"commit":{"message":"dump_pfam_type","shortMessageHtmlLink":"dump_pfam_type"}},{"before":"e7bddde03b7d39fad322181e12f9bf4dfc4875a7","after":"e82080fab797b40226eadd4d8de967d3c2a2e5f0","ref":"refs/heads/main","pushedAt":"2024-04-04T19:31:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LicoriceLin","name":null,"path":"/LicoriceLin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/93641868?s=80&v=4"},"commit":{"message":"dump_pangenome_graph_v1","shortMessageHtmlLink":"dump_pangenome_graph_v1"}},{"before":"72e2f740d6c7690e93ce2015a0b6441783c1118f","after":"352dba76718437e206d6561b83219d471eeb8811","ref":"refs/heads/taxonomy-prediction","pushedAt":"2024-04-04T04:30:01.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lukepereira","name":null,"path":"/lukepereira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19697621?s=80&v=4"},"commit":{"message":"WIP","shortMessageHtmlLink":"WIP"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEZ4Zc7gA","startCursor":null,"endCursor":null}},"title":"Activity ยท serratus-bio/pangenome"}