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Hi there

I'm Srinivas Gorur-Shandilya

  • This is my website. I mostly post pictures there.
  • I'm a computational neuroscientist at Inscopix 🔬
  • Before that I was a computational neuroscientist in Eve Marder's lab at Brandeis University. The lab works with 🦀🦀🦀
  • Before that I completed my PhD work at Yale University studing how flies smell. 🐝👃
  • Here's a list of my publications.
  • Look at some of my code here ⬇️


  1. xolotl Public

    A MATLAB neuron simulator. Very fast (written in C++). Flexible (fully object oriented). Immediate (live manipulation in MATLAB). Comes with a powerful parameter optimizer. Get started ➡️

    C++ 44 7

  2. Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

    C++ 541 104

  3. A simple MATLAB wrapper for umap. Supports un/semi/supervised embedding.

    MATLAB 6 2

  4. crabsort Public

    🦀🦀🦀 Sort spikes from extra-cellular recordings using neural networks. Fully automated.

    MATLAB 17 4

  5. A black box neuron that allows students to do electrophysiology experiments and uncover the mechanisms of neuron function


  6. condalab Public

    MATLAB utility to switch between Anaconda environments

    MATLAB 12 9

1,636 contributions in the last year

Dec Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Mon Wed Fri
Activity overview
Contributed to sg-s/uflix, sg-s/pycore, sg-s/ and 33 other repositories

Contribution activity

November 2022

Created 1 repository

Created a pull request in schnitzer-lab/EXTRACT-public that received 4 comments

allows extract to work in a reduce MATLAB environment without some req toolboxes

I have MATLAB with only these toolboxes: ----------------------------------------------------------------------------------------------------- MATL…

+55 −2 4 comments
Opened 1 other pull request in 1 repository
schnitzer-lab/EXTRACT-public 1 closed

Created an issue in schnitzer-lab/EXTRACT-public that received 3 comments

[general help on improving cell extraction]

Hello, ran EXTRACT on some 1-p data and I am generally unhappy with the cells extracted. some screenshots below. I would greatly appreciate any hel…

Opened 7 other issues in 4 repositories
Started 1 discussion in 1 repository
98 contributions in private repositories Nov 1 – Nov 28

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