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README.md

MALDIquant Examples

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This R package provides some some examples to demonstrate how to analyze mass spectrometry data using MALDIquant.

Description

MALDIquant provides a complete analysis pipeline for MALDI-TOF and other mass spectrometry data. Distinctive features include baseline subtraction methods such as TopHat or SNIP, peak alignment using warping functions, handling of replicated measurements as well as allowing spectra with different resolutions.

Please visit: http://strimmerlab.org/software/maldiquant/

Details

MALDIquant examples

MALDIquantForeign examples

Mass Spectrometry Imaging (MSI) examples

Demo files distributed with the MALDIquant R package

Installation

GitHub is not supported by the basic install.packages command. You could use the devtools package to install MALDIquantExamples.

install.packages("devtools")
library("devtools")
install_github("sgibb/MALDIquantExamples")

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Some examples to analyze mass spectrometry data using MALDIquant

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