R-package for the analysis of Thermo Orbitrap Fusion Top-Down Proteomic Data.
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README.md

topdownr

Project Status: Active - The project has reached a stable, usable state and is being actively developed. build status codecov.io license

years in bioc bioc downloads Release: build release Devel: build devel

Installation

if (!require("BiocManager"))
    install.packages("BiocManager")
BiocManager::install("topdownr")

If you want to install the development version from github (not recommended unless you know what you are doing):

if (!require("BiocManager"))
    install.packages("BiocManager")
BiocManager::install("sgibb/topdownr")

Documentation

To get started:

?"topdownr-package"
vignette("data-generation", package="topdownr")
vignette("analysis", package="topdownr")

Development documentation: https://sgibb.github.io/topdownr/

Questions

General questions should be asked on the Bioconductor support forum, using topdownr to tag the question. Feel also free to open a GitHub issue, in particular for bug reports.

Contribution

See CONTRIBUTING.md.

Support

See SUPPORT.md.