From d2796daf5927caa18e28b32ed2285745a7eda395 Mon Sep 17 00:00:00 2001 From: Quanhu Sheng Date: Mon, 2 Oct 2017 16:02:53 -0500 Subject: [PATCH] v4.1.7 --- Properties/RcpaToolsAssembly.cs | 2 +- README.md | 8 +++++++- 2 files changed, 8 insertions(+), 2 deletions(-) diff --git a/Properties/RcpaToolsAssembly.cs b/Properties/RcpaToolsAssembly.cs index 386bbf0..fa11ec3 100644 --- a/Properties/RcpaToolsAssembly.cs +++ b/Properties/RcpaToolsAssembly.cs @@ -16,6 +16,6 @@ static class RcpaToolsAssembly internal const string Author = "Quanhu SHENG"; internal const string Company = "RCPA/CQS"; internal const string Copyright = "Copyright (C) 2006-2017 " + Company; - internal const string Version = "4.1.5"; + internal const string Version = "4.1.7"; internal const string InformationalVersion = Version; } \ No newline at end of file diff --git a/README.md b/README.md index ea89fd5..7b5d677 100644 --- a/README.md +++ b/README.md @@ -63,12 +63,18 @@ The c# source code is also provided at following repositories. Visual Studio 201 - TurboRAW2MGF : Sheng Q, Li R, Dai J, Li Q, Su Z, Guo Y, Li C, Shyr Y, Zeng R: Preprocessing significantly improves the peptide/protein identification sensitivity of high-resolution isobarically labeled tandem mass spectrometry data. Mol Cell Proteomics 2015, 14(2):405-417. - O18 Quantification : Guo Y, Miyagi M, Zeng R, Sheng Q: O18Quant: A Semiautomatic Strategy for Quantitative Analysis of High-Resolution 16O/18O Labeled Data. BioMed research international 2014, 2014:971857. - BuildSummary : Sheng Q, Dai J, Wu Y, Tang H, Zeng R: BuildSummary: using a group-based approach to improve the sensitivity of peptide/protein identification in shotgun proteomics. J Proteome Res 2012, 11(3):1494-1502. +- Peptide retreival: Tu C, Shen S, Sheng Q, Shyr Y, Qu J: A peptide-retrieval strategy enables significant improvement of quantitative performance without compromising confidence of identification. J Proteomics 2017, 152:276-282. - SRMBuilder : Sheng Q, Wu C, Su Z, Zeng R: SRMBuilder: a user-friendly tool for selected reaction monitoring data analysis. Journal of bioinformatics and computational biology 2011, 9 Suppl 1:51-62. #Changes +- 2017/09/28 Version 4.1.7 + 1. Enhanced: Output 4 digits for ms1 retention time. +- 2017/08/08 Version 4.1.6 + 1. Enhanced: Implement peptide retreival function in BuildSummary. + 2. Bugfix: O18 quantification throw exception of error format. - 2017/03/27 Version 4.1.5 - 1. New feature: BuildSummary compatible with MSFlagger search engine (previous X!Tandem pepXML format). + 1. New feature: BuildSummary compatible with MSFlagger search engine. - 2017/03/25 Version 4.1.4 1. Enhance: BuildSummary compatible with X!Tandem pepXML format. - 2017/02/14 Version 4.1.3