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Glimma

Welcome to Glimma, a R package for creating interactive plots for differential expression analysis.

User suggestions are very welcome, please start an issue for usability improvements or features you'd like to see!

Installation

Using BioConductor

This is the recommended method for installing Glimma. The release version can be installed by running the code below:

source("https://bioconductor.org/biocLite.R")
biocLite("Glimma")

If a more recent version is required the developmental version:

source("https://bioconductor.org/biocLite.R")
useDevel()
biocLite("Glimma")

Bug reports

If you find bugs please let me know by submitting an issue to this project. If possible please provide a small runnable example demonstrating the bug, operating system and R version.

Features

MDS Plots

Changing dimensions to plots

bar-click

Changing conditions to colour by

groups

MD Plot

Hovering over points

points-hover

Clicking points

points-click

Clicking on table entries

table-click

About

Glimma R package

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