Yet Another Pipeline
Python R
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retired
CDHIT_mothurize_clstr.py
CleanFasta.py
ClusterRename.py
ConsTaxonomyPlots.R
ContigCoverageUpdate.py
FastQEncoding.py
FastaFilter.py
FastaUniversalRenamer.py
FileStats.R
FilterUnirefClusters.py
LICENSE.txt
MatchGroupsToFasta.py
MateDemux.py
MateFilter.py
MothurCommandInfoWrapper.py
ORFCoverage.py
ORFCoverageModifyProk.py
ORFweights.r
OTUtableMaker.py
OtuReadPlots.r
PipelineContaminants.py
PrimerClipper.py
RemapGroups.py
Retrieve.py
SplitFastX.py
StatFastaFiles.R
StatQualFiles.R
StepsLibrary.py
StepsLibrary_EXP.py
UngroupFasta.py
YAPBLAST.py
YAPDemux.py
YAPDemuxedMateAssemble.py
YAPDemuxedMateReAssemble.py
YAPFastaAssemble.py
YAPFastaCleanup.py
YAPMascot.py
YAPMateAssemble.py
YAPORFNormalize.py
YAP_454.py
YAP_MiSeq.py
YAP_devel.py
YAPplots.R
alignmentSummary.R
alignmentSummary.py
alignmentTrimmer.py
fastAtrimmer.py
interweaveMates.py
postYAP.py
prereqs.R
rarefactions.R
traverser.py