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  • RCy3

    Forked from cytoscape/RCy3

    New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community

    R 12 MIT License Updated Oct 22, 2019
  • Tissue-specific variant annotation pipeline

    R Updated Jul 26, 2019
  • R package with generic tools for data exploration

    R Updated May 29, 2019
  • RCircos

    Forked from cran/RCircos

    Shraddha's fork of RCircos — Circos 2D Track Plot. Original package homepage: http://bitbucket.org/henryhzhang/rcircos

    R 14 Updated Apr 29, 2019
  • Software used to generate the results in the neuronal case/control EWAS reported in:

    R 2 Updated Feb 14, 2019
  • Implementation of modified mashup algorithm in Julia Language.

    Julia 4 Other Updated Jun 11, 2018
  • Plots data associated with genomic intervals along chromosomal ideogram.

    R GNU General Public License v2.0 1 issue needs help Updated Feb 7, 2018
  • Markdown version of Cytoscape manual

    19 Creative Commons Zero v1.0 Universal Updated Jun 26, 2017
  • mashup

    Forked from memoiry/mashup

    Integrate mashup algorithm for the network integration.

    MATLAB 2 Updated Jun 8, 2017
  • Useful calculations and code for planning genomics experiments

    R Updated Apr 6, 2017
  • Finds tagSNPs overlapping regions of interest. Modified version of Simon Coetzee's BioC package

    R Updated Apr 21, 2016
  • Tutorials for Unix/HPC/other tools to get genomics done

    Updated Jan 18, 2016
  • Multi-threaded C++ parser to convert registered ChIP-SEQ peak IDs (HOMER) to table of average peak intensities

    C++ 1 GNU General Public License v3.0 Updated Dec 10, 2015
  • Miscellaneous R scripts to do useful things

    R GNU General Public License v3.0 Updated Oct 27, 2015
  • FORGE

    Forked from inti/FORGE

    This project develops the program FORGE. It allows to calculate gene p-values from Genome-Wide Association Data using multivariate methods. The gene-level statistics can be used for pathway or othe…

    Perl 5 Updated Apr 20, 2015
  • sandbox of C++ constructs

    C++ GNU General Public License v3.0 Updated Feb 3, 2015
  • Epigenome Data Browser, an interactive statistical browser for genomic datasets

    R 2 2 GNU General Public License v3.0 Updated Dec 2, 2014
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