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Commits on Apr 3, 2013
  1. @racheldenison

    Merge pull request #17 from racheldenison/master

    racheldenison authored
    Rachel's large pull request
Commits on Apr 2, 2013
  1. updated rd_centerOfMassGroupAnalysis to run when you give it a matrix…

    Rachel Denison authored
    … of voxel sizes (which can be different for each subject) instead of a fixed voxel size for all subjects. with this change, the plots at various thresholds figure is now in units of voxels, insted of units of mm, as shown in the figure title
Commits on Apr 1, 2013
  1. @alinal

    added development version of addROIgrow.m which correctly loops throu…

    alinal authored
    …gh slices in order to grow 3D ROIs in the Volume
  2. @alinal
Commits on Mar 30, 2013
  1. @alinal

    new file rd_mrROISize to calculate ROI volume in mm^3, with option to…

    alinal authored
    … also return the number of functional and inplane (GEMS) voxels
  2. @alinal
  3. @alinal

    mostly running analyses

    alinal authored
Commits on Mar 28, 2013
  1. @alinal

    code for automatically running time course and multivoxel ROI analyse…

    alinal authored
    …s AND automatically restricting ROIs by cothresh and saving as new ROIs
  2. @alinal

    running analyses

    alinal authored
Commits on Mar 27, 2013
  1. small meaningless changes in fstat group analysis code

    Rachel Denison authored
  2. @alinal

    running analyses

    alinal authored
Commits on Mar 26, 2013
  1. @alinal

    updated comments and definition of includeMotionRegressors in glm_cre…

    alinal authored
    …ateDesMtx development version
Commits on Mar 25, 2013
  1. adding files to include motion regressors in the mrVista GLM. not ful…

    Rachel Denison authored
    …ly integrated, but should not break anything
  2. @alinal

    rd_glmDenoise.m added options for letting data have either 2 or 4 dim…

    alinal authored
    …ensions. 4 dimensions needed to make useful figures in GLMdenoise.
Commits on Mar 23, 2013
  1. @alinal

    glm denoise script for mrvista

    alinal authored
Commits on Mar 16, 2013
  1. @alinal
  2. @alinal

    running analyses

    alinal authored
Commits on Mar 15, 2013
  1. @alinal

    running analyses

    alinal authored
Commits on Mar 14, 2013
  1. @alinal

    running analyses

    alinal authored
Commits on Mar 13, 2013
  1. @alinal
  2. updated rd_mrAdjustInplane to correct the voxel size in reconstructed…

    Rachel Denison authored
    … MN scans
Commits on Mar 12, 2013
  1. @alinal
  2. @alinal

    running analyses

    alinal authored
Commits on Mar 11, 2013
  1. added subject id annotation to xz plots in rd_centersOfMassNormGroupA…

    Rachel Denison authored
    …nalysis.m
  2. option to use raw or normalized centers in rd_centerOfMassNormGroupAn…

    Rachel Denison authored
    …alysis.m
Commits on Mar 8, 2013
  1. @alinal

    added options to rd_centerOfMassNormGroupAnalysis.m for other coords …

    alinal authored
    …types -- Volume still does not plot correctly
  2. @alinal

    added options to rd_centerOfMassGroupAnalysis.m for other coords type…

    alinal authored
    …s -- Volume still does not plot correctly
  3. @alinal

    running analyses

    alinal authored
Commits on Mar 7, 2013
  1. @alinal

    minor changes

    alinal authored
Commits on Mar 6, 2013
  1. @alinal

    In rd_normalizeCenterOfMass.m, added options for Talairach coords and…

    alinal authored
    … Talairach coords with no scaling. Now also saving unnormalized XZ plots
  2. @alinal

    updated some comments

    alinal authored
Commits on Feb 22, 2013
  1. @alinal

    added rd_mrXformCentersVolCoordsToTalCoords and rd_volToTalairach, wh…

    alinal authored
    …ich together allow transformation of volume centers coordinates to talairach coords. rd_volToTalairach differs from volToTalairach (mrVista) only in that it also returns the pre-scaling talairach coord (so it is rotated and translated, but not stretched)
  2. @alinal
Commits on Feb 17, 2013
Commits on Feb 11, 2013
  1. @alinal

    running analyses

    alinal authored
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