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/*
* Copyright (C) 2009-2012 Simon A. Berger
*
* This file is part of papara.
*
* papara is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* papara is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with papara. If not, see <http://www.gnu.org/licenses/>.
*/
#ifndef __tree_similarity_h
#define __tree_similarity_h
#if 0
#include <vector>
#include <boost/dynamic_bitset_fwd.hpp>
namespace ivy_mike {
namespace tree_parser_ms {
class lnode;
}
}
typedef std::vector<boost::dynamic_bitset<> > split_set_t;
bool split_sets_equal( const split_set_t &s1, const split_set_t &s2 );
double compare_trees( ivy_mike::tree_parser_ms::lnode *t1, ivy_mike::tree_parser_ms::lnode *t2, split_set_t &t2_splits );
void get_all_splits( ivy_mike::tree_parser_ms::lnode *t, std::vector< std::pair< ivy_mike::tree_parser_ms::lnode*, ivy_mike::tree_parser_ms::lnode* > > &edges, std::vector<boost::dynamic_bitset<> > &splits, std::vector<ivy_mike::tree_parser_ms::lnode *> &sorted_tips );
#endif
#endif