Bootstrap: docker
From: ubuntu:focal

%help
USAGE: salome [-h]

NOTES:
1) This image is read-only!

EXAMPLES:
Run salome in TUI mode:
    $ singularity run --app salome  <image-name> -t scrypt.py args:....

Run salome in GUI mode:
    $ singularity run --nv --app salome  <image-name>

To add support for MeshGems:
    $ singularity run --nv -B ${MESHGEMS_LICDIR}:/opt/DISTENE/license  [--app <app>] <image-app>
where MESHGEMS_LICDIR points to the directory holding a valid MeshGems license

%runscript
exec salome "$@"

%environment
export PATH=/opt/SALOME-9.8.0-UB20.04:$PATH
export FEELPP_REPOSITORY=/feel
export LC_ALL="C"

%labels
AUTHOR christophe.trophime@lncmi.cnrs.fr
Maintainer: Christophe Trophime
Maintainer_email: christophe.trophime@lncmi.cnrs.fr
Version 1.0

%post

# create repositories
mkdir -p /scratch /tmp /home /mnt
mkdir -p /opt/DISTENE/DLim
mkdir -p /feel

# firefox-esr on Debian 
apt-get update
apt-get -y upgrade
apt-get -y install lsb-release wget curl
apt-get -y install iputils-ping net-tools nmap

# Add contrib and non-free section (should check if updates and backports exist)
PLATFORM=$(lsb_release -cs)

# firefox-esr on Debian 
apt-get update
apt-get -y upgrade
apt-get -y install firefox

# Install Salome
if [ ! -f /tmp/SALOME-9.8.0-SRC.tar.gz ]; then
 wget -O /tmp/SALOME-9.8.0-SRC.tar.gz \
        "https://files.salome-platform.org/Salome/Salome9.8.0/SALOME-9.8.0-native-UB20.04-SRC.tar.gz"
fi

mkdir -p /opt/
mkdir -p /opt/DISTENE
cd /opt
tar zxf /tmp/SALOME-9.8.0-SRC.tar.gz
rm /tmp/SALOME-9.8.0-SRC.tar.gz
mv SALOME-9.8.0-native-UB20.04-SRC SALOME-9.8.0-UB20.04
pwd
ls -l /opt 
cd SALOME-9.8.0-UB20.04
./install_bin.sh
rm -rf BINARIES-UB20.04
perl -pi -e "s|BINARIES-UB20.04|INSTALL|g" salome
perl -pi -e "s|BINARIES-UB20.04|INSTALL|g" mesa_salome
chown -R root:root .
chmod go+w INSTALL/SALOME/bin/salome/test/Testing/Temporary

# Install pre-requiste packages 
apt-get -y install wget net-tools 
apt-get -y install firefox 
apt-get -y install git cmake g++ libgfortran5 
apt-get -y install mesa-utils libglu1-mesa-dev libglvnd-dev libxt-dev libxmu-dev libglvnd-dev libfontconfig-dev libtbb-dev libxft-dev 
apt-get -y install autotools-dev autoconf automake libtool libgsl-dev
apt-get -y install python-is-python3 python3-distro python3-apt libpython3.8 \
                              python3-psutil python3-memory-profiler python3-sip python3-six \
                              python3-requests python3-click python3-pyparsing python3-pygments \
                              python3-numpy python3-scipy python3-matplotlib \
                              libboost-filesystem1.71.0 libboost-system1.71.0 libboost-serialization1.71.0 libboost-thread1.71.0 \
			      libboost-regex1.71.0  libboost-date-time1.71.0  libboost-chrono1.71.0  libboost-atomic1.71.0 \
                              libqwt-qt5-6 libqt5xml5 libqt5printsupport5 libqt5test5 libqt5x11extras5 libqt5help5 python3-pyqt5 \
                              libfreeimage3 \
                              libcgraph6 libgvc6 \
                              libmetis5 libscotch-6.0 \
			      libcppunit-1.15-0 libxss1 libgomp1 libquadmath0 libgtk2.0-0
DEBIAN_FRONTEND=noninteractive \
apt-get -y install python3-pint python3-yaml python3-psutil python3-memory-profiler \
       libboost-all-dev libcppunit-dev liblapack-dev libxml2-dev \
       swig doxygen libgraphviz-dev \
       qttools5-dev libqt5svg5-dev libqt5x11extras5-dev qtxmlpatterns5-dev-tools \
       python3-sip-dev pyqt5-dev pyqt5-dev-tools libfreeimage-dev libqwt-qt5-dev llvm-dev
apt-get -y install libopenblas-pthread-dev libcminpack-dev \
       libnlopt-dev libeigen3-dev python3-statsmodels


# Clean-up
rm -rf /opt/SALOME-9.8.0-UB20.04/BINARIES-UB20.04
rm -rf /opt/SALOME-9.8.0-UB20.04/ARCHIVES/*
rm -rf /opt/SALOME-9.8.0-UB20.04/BUILD/*
rm -rf /opt/SALOME-9.8.0-UB20.04/SOURCES/*

# hack (do not reset LD_LIBRARY_PATH)
perl -pi -e "s|context.setVariable\(r\"LD_LIBRARY_PATH\", r\"\", overwrite=True\)|# context.setVariable\(r\"LD_LIBRARY_PATH\", r\"\", overwrite=True\)|g" /opt/SALOME-9.8.0-UB20.04/salome
perl -pi -e "s|context.setVariable\(r\"LD_LIBRARY_PATH\", r\"\", overwrite=True\)|# context.setVariable\(r\"LD_LIBRARY_PATH\", r\"\", overwrite=True\)|g" /opt/SALOME-9.8.0-UB20.04/mesa_salome

# MeshGems
mkdir -p /opt/DISTENE/license
perl -pi -e "s|/home/salome-public/prerequis/LICENCE/libSalomeMeshGemsKeyGenerator|/opt/DISTENE/license/libSalomeMeshGemsKeyGenerator|" /opt/SALOME-9.8.0-UB20.04/salome
perl -pi -e "s|libSalomeMeshGemsKeyGenerator-2.13-1-UB20.04.so|libSalomeMeshGemsKeyGenerator.so|" /opt/SALOME-9.8.0-UB20.04/salome
perl -pi -e "s|/home/salome-public/prerequis/LICENCE/libSalomeMeshGemsKeyGenerator|/opt/DISTENE/license/libSalomeMeshGemsKeyGenerator|" /opt/SALOME-9.8.0-UB20.04/mesa_salome
perl -pi -e "s|libSalomeMeshGemsKeyGenerator-2.13-1-UB20.04.so|libSalomeMeshGemsKeyGenerator.so|" /opt/SALOME-9.8.0-UB20.04/mesa_salome

# create custom motd
# Install figlet!
version=$(/opt/SALOME-9.8.0-UB20.04/salome --version)
apt update
apt install -y figlet

cat > /.singularity.d/env/99-motd.sh <<EOF   
case \$0 in
    /.singularity.d/actions/shell)
        figlet $version
        echo
        echo "Hello $USER from shell" ;;
    /.singularity.d/actions/exec)
        echo "Hello $USER from exec" ;;
    /.singularity.d/actions/run)
        echo "Hello $USER from run" ;;
    /.singularity.d/actions/test)
        echo "Hello $USER from test" ;;
esac
EOF

# clean up
#apt -y install apt-file
#apt-file update
apt -y autoclean

%apprun salome
salome -w1 "$@"