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  • University of British Columbia, BC Cancer Agency Genome Sciences Centre
  • Vancouver, Canada

Organizations

@Homebrew @bcgsc @STAT545-UBC @Linuxbrew

Pinned repositories

  1. Linuxbrew/brew

    🍺🐧 The Homebrew package manager for Linux

    Ruby 997 101

  2. bcgsc/abyss

    🔬 De novo genome sequence assembler to assemble large genomes using short reads

    C++ 98 46

  3. Linuxbrew/homebrew-core

    🍻🐧 Core formulae for the Linuxbrew package manager

    Ruby 93 67

  4. GFA-spec/GFA-spec

    Graphical Fragment Assembly (GFA) Format Specification

    Makefile 61 14

  5. Homebrew/homebrew-science

    🍺🔬 Scientific formulae for the Homebrew package manager

    Ruby 946 923

  6. open-science

    🔬 Open, reproducible science using Make, RMarkdown and Pandoc

    CSS 7 8

5,604 contributions in the last year

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Contribution activity First pull request First issue First repository Joined GitHub

July 2017

Created a pull request in Homebrew/homebrew-science that received 14 comments

r: Depends on cairo for Linux

Change cairo from an optional dependency to a mandatory dependency on Linux. Cairo is required to render figures to PNG.

+5 −7 • 14 comments
Created an issue in johnkerl/miller that received 7 comments

realloc(18446744039349813248) failed.

Hi, John. I'm running mlr to calculate count,p25,p50,p75,mean,stddev of one integer column with three billion rows, one row per nucleotide of the h…

7 comments
1 contribution in private repositories Jul 12

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